mRNA_E_fasciculatus_S2_contig7085.15255.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7085.15255.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK8_ECTSI) HSP 1 Score: 219 bits (559), Expect = 2.670e-65 Identity = 111/149 (74.50%), Postives = 118/149 (79.19%), Query Frame = 1
Query: 1 GGSKCLDAFILALNQAGDGQQKRWYVSTLELQLASLELCGACRSAQMLDVCIDEDTPPTLWSSRTSHTTPSQRSPEVCISNRVPAVQAVGWTWKLSMDRLPQRAATELQPGPKRRRPNGHELAASVGSVVWPPSLKRLVFHSEMPSSTV 447
GG LD I+ALNQA DGQ+KRWYVSTLELQL SLELCGACRSAQ+L V + EDTPPTLWSSRTS TTPSQRSPEVC SNRVPAVQA+ WTW L MDRLPQRAA E QP +RR +GH AASV SVVWP SLKRLVF MP V
Sbjct: 85 GGGSSLDTLIVALNQACDGQEKRWYVSTLELQLVSLELCGACRSAQLLHVFVREDTPPTLWSSRTSRTTPSQRSPEVCTSNRVPAVQALCWTWALPMDRLPQRAAAEPQPVTERRLQDGHSFAASVESVVWPESLKRLVFSRRMPGKAV 233
BLAST of mRNA_E_fasciculatus_S2_contig7085.15255.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNI6_9PHAE) HSP 1 Score: 186 bits (471), Expect = 5.340e-48 Identity = 98/172 (56.98%), Postives = 118/172 (68.60%), Query Frame = 1
Query: 1 GGSKCLDAFILALNQAGDGQQKRWYVSTLELQLASLELCGACRSAQMLDVCIDEDTPPTLWSSRTSHTTPSQRSPEVCISNRVPAVQAVGWTWKLSMDRLPQRAATELQPGPKRRRPNGHELAASVGSVVWPPSLKRLVFHSEMPSSTV--PGSLQEQSRRDALNRPIHSIV 510
G SKCLDAF++ALNQA DGQ+KRWYVSTLELQL SLE+CGACR Q L V + TPP+LW +HTT + RSP+VCIS+RVP VQA G TW L M L QR+ATE++ G RR N H AAS+ S VWP LKR+VF S+M +T P SLQ+ S N+ I +
Sbjct: 5 GNSKCLDAFVVALNQACDGQEKRWYVSTLELQLVSLEVCGACRRVQTLHVRVKPQTPPSLWFPSQNHTTTNNRSPKVCISSRVPVVQAFGLTWALPMGVLQQRSATEVRSGSGCRRANTHSSAASLESAVWPQRLKRMVFESDMTVNTASWPASLQQLSFGCGFNQAIVGVA 176
BLAST of mRNA_E_fasciculatus_S2_contig7085.15255.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K9_9PHAE) HSP 1 Score: 171 bits (434), Expect = 1.100e-43 Identity = 95/168 (56.55%), Postives = 111/168 (66.07%), Query Frame = 1
Query: 1 GGSKCLDAFILALNQAGDGQQKRWYVSTLELQLASLELCGACRSAQMLDVCIDEDTPPTLWSSRTSHTTPSQRSPEVCISNRVPAVQAVGWTWKLSMDRLPQRAATELQPGPKRRRPNGHELAASVGSVVWPPSLKRLVFHSEMPSSTV--PGSLQEQSRRDALNRPI 498
G S+CLDAFI+AL QAGDG+ KRWYVSTLELQL SLE CGACRSA DV I TP +LWS R SH T +RS E CI +RVPAVQA GW W L M+ L R+ATEL + R+P G A S G + W L RL+F+SE ++V P LQE S D N+PI
Sbjct: 25 GRSECLDAFIVALKQAGDGRAKRWYVSTLELQLVSLEFCGACRSALSFDVQIHRQTPHSLWSPRKSHGTLKKRSREACIPSRVPAVQANGWMWALPMEILLPRSATELHQVSENRQPTGPSSATSPGRMGWFQKLTRLMFYSERSVNSVSWPACLQELSFGDFFNQPI 192
BLAST of mRNA_E_fasciculatus_S2_contig7085.15255.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLV1_9PHAE) HSP 1 Score: 162 bits (410), Expect = 1.160e-41 Identity = 89/158 (56.33%), Postives = 107/158 (67.72%), Query Frame = 1
Query: 1 GGSKCLDAFILALNQAGDGQQKRWYVSTLELQLASLELCGACRSAQMLDVCIDEDTPPTLWSSRTSHTTPSQRSPEVCISNRVPAVQAVGWTWKLSMDRLPQRAATELQPGPKRRRPNGHELAASVGSVVW-PPSLKRLVFHSEMPSSTV--PGSLQE 465
G S+CL AFI+ALNQ +GQ+KRWY STLELQL SLE CGACR L V +D TP +LWS SH T +RS E C+SNRVPAVQA G TW L M+ L Q +A EL+ K RR +G+ AS+GS+ W LKRLVF S+MP+ST P SL +
Sbjct: 13 GRSECLRAFIVALNQTCNGQEKRWYASTLELQLVSLEFCGACRRVPTLHVRVDRQTPRSLWSPCKSHATTKKRSREACVSNRVPAVQASGLTWALDMEVLLQTSAVELRSRSKYRRVSGNSSTASLGSMFWLQMMLKRLVFDSDMPASTASWPASLPQ 170
BLAST of mRNA_E_fasciculatus_S2_contig7085.15255.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LIJ3_9PHAE) HSP 1 Score: 139 bits (350), Expect = 6.270e-32 Identity = 72/142 (50.70%), Postives = 101/142 (71.13%), Query Frame = 1
Query: 7 SKCLDAFILALNQAGDGQQKRWYVSTLELQLASLELCGACRSAQMLDVCIDEDTPPTLWSSRTSHTTPSQRSPEVCISNRVPAVQAVGWTWKLSMDRLPQRAATELQPGPKRRRPNGHELAASVGS-VVWPPSLKRLVFHSE 429
++CLDAF++AL+QA +G +KRWY STLELQL SL+LC ACR+ +L V +D+ TP +LWSSRT+ T P+ RS + IS+RVP V+A+ TW LSM+ L ++AA EL +R G +S+GS VVWP L +LV +++
Sbjct: 9 TRCLDAFVIALSQACEGGEKRWYASTLELQLTSLDLCRACRTTSILHVHVDDQTPRSLWSSRTAQTRPNTRSWNLHISSRVPVVRALRLTWALSMEALLRKAAIELWTWSERLELLGSSCVSSLGSEVVWPRGLTQLVLYTD 150
BLAST of mRNA_E_fasciculatus_S2_contig7085.15255.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7F9_ECTSI) HSP 1 Score: 122 bits (307), Expect = 1.770e-29 Identity = 67/143 (46.85%), Postives = 90/143 (62.94%), Query Frame = 1
Query: 1 GGSKCLDAFILALNQAGDGQQKRWYVSTLELQLASLELCGACRSAQMLDVCIDEDTPPTLWSSRTSHTTPSQRSPEVCISNRVPAVQAVGWTWKLSMDRLPQRAATELQPGPKRRRPNGHELAASVGSVVWPPSLKRLVFHSE 429
G ++ DAF +AL+QA +G +KRWY ST ELQL SL++C ACRS L V + TP +LWS T P+ +S +V + +RVP V+A+ TW SM+ L QRAA EL +R G AAS+GSVVWP L +LV ++
Sbjct: 5 GYTRSFDAFAIALSQACEGGEKRWYTSTTELQLGSLDICRACRSTPTLHVRVTGGTPTSLWSPPTVQALPNTQSSKVRVVSRVPVVRALRLTWAFSMETLVQRAAIELWSRSERLEMVGPLCAASLGSVVWPLGLTQLVLDTD 147
BLAST of mRNA_E_fasciculatus_S2_contig7085.15255.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1V9_9PHAE) HSP 1 Score: 122 bits (307), Expect = 6.290e-27 Identity = 67/137 (48.91%), Postives = 85/137 (62.04%), Query Frame = 1
Query: 10 KCLDAFILALNQAGDGQQKRWYVSTLELQLASLELCGACRSAQMLDVCIDEDTPPTLWSSRTSHTTPSQRSPEVCISNRVPAVQAVGWTWKLSMDRLPQRAATELQPGPKRRRPNGHELAASVGSVVWPPSLKRLVF 420
+CLDAF++AL+Q +G +KRWY STL+LQLASLE CGACRS ML V +D +TPPTLWS Q +P S RVPAVQAVG TW + A++EL + + A++ SVVWP L+RLV
Sbjct: 8 RCLDAFVVALSQCYEGGEKRWYTSTLQLQLASLEFCGACRSTPMLHVYVDAETPPTLWSL-------GQANPTAGTSTRVPAVQAVGLTWARPTESPLGSASSELWTRLESLQLQVSLCTANLDSVVWPQGLQRLVM 137
BLAST of mRNA_E_fasciculatus_S2_contig7085.15255.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Z9_ECTSI) HSP 1 Score: 97.1 bits (240), Expect = 1.790e-20 Identity = 52/98 (53.06%), Postives = 61/98 (62.24%), Query Frame = 1
Query: 7 SKCLDAFILALNQAGDGQQKRWYVSTLELQLASLELCGACRSAQMLDVCIDEDTPPTLWSSRTSHTTPSQRSPEVCISNRVPAVQAVGWTWKLSMDRL 300
SKCLDAF++ALNQ DGQ+KRWY STLELQL SLE CGACR L V +D TP +LWS RT+ T +RS +V GW +K RL
Sbjct: 39 SKCLDAFVVALNQTCDGQEKRWYASTLELQLVSLEFCGACRHVPTLHVRVDRRTPRSLWSPRTTPITAHKRSRKVL----------EGWQFKYRGGRL 126
BLAST of mRNA_E_fasciculatus_S2_contig7085.15255.1 vs.
Match: Reverse (transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSE5_9PHAE) HSP 1 Score: 97.8 bits (242), Expect = 8.250e-18 Identity = 44/73 (60.27%), Postives = 57/73 (78.08%), Query Frame = 1
Query: 1 GGSKCLDAFILALNQAGDGQQKRWYVSTLELQLASLELCGACRSAQMLDVCIDEDTPPTLWSSRTSHTTPSQR 219
G SKCLDAFI+ +NQA DG++++WY STLELQL SL CGACRSA+ML + +D PP+LW S+TTP++R
Sbjct: 971 GKSKCLDAFIVTMNQAADGRKQQWYASTLELQLVSLAFCGACRSAKMLHLHVDRGKPPSLWFPHKSYTTPNKR 1043
BLAST of mRNA_E_fasciculatus_S2_contig7085.15255.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXX4_9PHAE) HSP 1 Score: 96.3 bits (238), Expect = 1.330e-17 Identity = 64/180 (35.56%), Postives = 87/180 (48.33%), Query Frame = 1
Query: 1 GGSKCLDAFILALNQAGDGQQKRWYVSTLELQLASLELCGACRSAQMLDVCIDEDTPPTLWSSRTSHTTPSQRSPEVC----------------------------ISNRVPAVQAVGWTWKLSMDRLPQRAATELQPGPKRRRPNGHELAASVGSVVWPPSLKRLVFHSEMPSSTVPGS 456
G S+ DA I+A++QA +G+ KRWY STLEL+LASLE C ACR + V +D +TPP+LWS T RS + IS+RVP QA+G TW L + L Q A EL + + + + SV WP +LKRL + ++ GS
Sbjct: 5 GASRGFDALIIAISQAYEGRGKRWYTSTLELRLASLETCRACRRVPTIHVRVDANTPPSLWSPHAMPTRAHTRSSKTRAXXXXXXXXXXXXXXXXXXXXXXXXKARISSRVPVGQALGLTWALPTEILLQGVAVELWTKLEFLQLRESLSPSDLVSVAWPQNLKRLALETGFEAAISAGS 184 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7085.15255.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7085.15255.1 >prot_E_fasciculatus_S2_contig7085.15255.1 ID=prot_E_fasciculatus_S2_contig7085.15255.1|Name=mRNA_E_fasciculatus_S2_contig7085.15255.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=478bp GGSKCLDAFILALNQAGDGQQKRWYVSTLELQLASLELCGACRSAQMLDVback to top mRNA from alignment at E_fasciculatus_S2_contig7085:403..1836+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7085.15255.1 ID=mRNA_E_fasciculatus_S2_contig7085.15255.1|Name=mRNA_E_fasciculatus_S2_contig7085.15255.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1434bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7085:403..1836+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7085:403..1836+ >mRNA_E_fasciculatus_S2_contig7085.15255.1 ID=mRNA_E_fasciculatus_S2_contig7085.15255.1|Name=mRNA_E_fasciculatus_S2_contig7085.15255.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1434bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7085:403..1836+ (Ectocarpus fasciculatus EfasUO2)back to top |