mRNA_E_fasciculatus_S2_contig7073.15241.1 (mRNA) Ectocarpus fasciculatus EfasUO2
|
Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7073.15241.1 vs.
Match: PHB (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDT1_ECTSI) HSP 1 Score: 562 bits (1449), Expect = 1.090e-198 Identity = 294/300 (98.00%), Postives = 296/300 (98.67%), Query Frame = 1
Query: 262 SSNMAFCFQCVSNSEVGVVERLGKFTGLAAPGLNCILWPIDNIVAKISTRVQQLDVRMETKTKDNVFVTAVVSVQYQPIKEKIYDAFYRLTDPQAQIRSYVFDVVRSTLPKLDLDQAFDSKEDIAVAVKNQLEEVMKEYGYMILQALVTDMDPDPRVKEAMNEINASKRMREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQTFAETIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVAAIQAAMRDGFMQGQAGSTDTPPPNMQQHKMVR 1161
S+NMAFCFQCVSNSEVGVVERLGKFTGLAAPGLNCILWPID IVAKISTRVQQLDVRMETKTKDNVFVTAVVSVQYQPIKEKIYDAFYRLTDPQAQIRSYVFDVVRSTLPKLDLDQAFDSKEDIAVAVKNQLEEVMKEYGY ILQALVTDMDPDPRVKEAMNEINASKRMREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQ FAE IDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVAAIQAAMRDGFMQGQAGST+TPPPNMQQHKMVR
Sbjct: 110 SANMAFCFQCVSNSEVGVVERLGKFTGLAAPGLNCILWPIDVIVAKISTRVQQLDVRMETKTKDNVFVTAVVSVQYQPIKEKIYDAFYRLTDPQAQIRSYVFDVVRSTLPKLDLDQAFDSKEDIAVAVKNQLEEVMKEYGYQILQALVTDMDPDPRVKEAMNEINASKRMREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQNFAEAIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVAAIQAAMRDGFMQGQAGSTETPPPNMQQHKMVR 409
BLAST of mRNA_E_fasciculatus_S2_contig7073.15241.1 vs.
Match: PHB (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KBQ9_9PHAE) HSP 1 Score: 498 bits (1283), Expect = 3.790e-174 Identity = 255/284 (89.79%), Postives = 273/284 (96.13%), Query Frame = 1
Query: 265 SNMAFCFQCVSNSEVGVVERLGKFTGLAAPGLNCILWPIDNIVAKISTRVQQLDVRMETKTKDNVFVTAVVSVQYQPIKEKIYDAFYRLTDPQAQIRSYVFDVVRSTLPKLDLDQAFDSKEDIAVAVKNQLEEVMKEYGYMILQALVTDMDPDPRVKEAMNEINASKRMREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQTFAETIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVAAIQAAMRDGFMQGQAGS 1116
SNMA CFQC+ N+E+GV+ERLGK+ GLA PG CI+WP+D+IVAK+STRVQQLDVRMETKTKDNVFVTAVVSVQYQPIK KIYDAFYRLTDP+AQIRSYV+DVVRSTLPKLDLDQAFDSKEDIA+AVKNQLEEVM+EYGY ILQALVTDMDPD RVK AMNEINASKR+REAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQTF+ETIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVA++Q+AMRDGFMQG AGS
Sbjct: 70 SNMACCFQCIPNAEIGVIERLGKYQGLAQPGFTCIMWPLDSIVAKLSTRVQQLDVRMETKTKDNVFVTAVVSVQYQPIKSKIYDAFYRLTDPKAQIRSYVYDVVRSTLPKLDLDQAFDSKEDIAIAVKNQLEEVMQEYGYQILQALVTDMDPDARVKGAMNEINASKRLREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQTFSETIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVASLQSAMRDGFMQGHAGS 353
BLAST of mRNA_E_fasciculatus_S2_contig7073.15241.1 vs.
Match: Flagellar (associated protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL74_9STRA) HSP 1 Score: 405 bits (1040), Expect = 2.450e-138 Identity = 204/282 (72.34%), Postives = 243/282 (86.17%), Query Frame = 1
Query: 280 CFQCVSNSEVGVVERLGKFTGLAAPGLNCILWPIDNIVAKISTRVQQLDVRMETKTKDNVFVTAVVSVQYQPIKEKIYDAFYRLTDPQAQIRSYVFDVVRSTLPKLDLDQAFDSKEDIAVAVKNQLEEVMKEYGYMILQALVTDMDPDPRVKEAMNEINASKRMREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQTFAETIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVAAIQAAMRDGFMQGQAGSTDT 1125
C CV SEVGVVER G+F LA PGL+ + WP+ +V ISTRVQQLDV+ ETKT DNVF+T V VQYQ + +K+YDAFYRLTDP++QIRSYV+DV+RST+PKL+LDQAF +KE++A AVK QL VM+EYGY ILQALVTD++PD RVK+AMNEINASKR+REAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQR+AIV GLRDS+ F+ +I+GT+PKDVMDLLLLTQYFDMLRD+GQS++++T+FLPHAP+SVA++Q AMRDGFMQ A T
Sbjct: 7 CCICVQTSEVGVVERFGQFEKLAKPGLSLVFWPLSQVVGTISTRVQQLDVQAETKTSDNVFITVNVCVQYQVLYDKVYDAFYRLTDPKSQIRSYVYDVIRSTMPKLELDQAFAAKEEVAHAVKEQLTVVMQEYGYQILQALVTDLEPDRRVKDAMNEINASKRLREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRQAIVAGLRDSIHDFSSSIEGTTPKDVMDLLLLTQYFDMLRDIGQSTKSSTIFLPHAPESVASLQGAMRDGFMQAAAAKAQT 288
BLAST of mRNA_E_fasciculatus_S2_contig7073.15241.1 vs.
Match: PHB (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP74_9PHAE) HSP 1 Score: 350 bits (899), Expect = 2.690e-118 Identity = 186/196 (94.90%), Postives = 190/196 (96.94%), Query Frame = 1
Query: 574 VRSTLPKLDLDQAFDSKEDIAVAVKNQLEEVMKEYGYMILQALVTDMDPDPRVKEAMNEINASKRMREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQTFAETIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVAAIQAAMRDGFMQGQAGSTDTPPPNMQQHKMVR 1161
V TLPKLDLDQAFDSKEDIAVAVKNQLEEVMKEYGYMILQALVTDMDPDPRVKEAMNEINASKR+REAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQ FAE IDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVAAIQAAMRDGFMQGQAGST+TPPP M++H MVR
Sbjct: 8 VTGTLPKLDLDQAFDSKEDIAVAVKNQLEEVMKEYGYMILQALVTDMDPDPRVKEAMNEINASKRLREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQNFAEAIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVAAIQAAMRDGFMQGQAGSTETPPPTMKEHTMVR 203
BLAST of mRNA_E_fasciculatus_S2_contig7073.15241.1 vs.
Match: Hypothetical (protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6S8S5L6_9STRA) HSP 1 Score: 343 bits (879), Expect = 5.270e-114 Identity = 172/278 (61.87%), Postives = 221/278 (79.50%), Query Frame = 1
Query: 268 NMAFCFQCVSNSEVGVVERLGKFTGLAAPGLNCILWPIDNIVAKISTRVQQLDVRMETKTKDNVFVTAVVSVQYQPIKEKIYDAFYRLTDPQAQIRSYVFDVVRSTLPKLDLDQAFDSKEDIAVAVKNQLEEVMKEYGYMILQALVTDMDPDPRVKEAMNEINASKRMREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQTFAETIDGTSPKDVMDLLLLTQYFDMLRDVGQS-SRAATVFLPHAPQSVAAIQAAMRDGFM 1098
N FC CV + V +VER GKF + PG C++WP+D+IV ++S RV+QLDV ETKTKDNVFV V+SVQYQ + EK +DAFY+L +P+ QI++YVFDVVRS LPK++LD++F +KE +A VK+ L+E M +GY I++ALVTD+ PD RVK +MNEINAS+R+REAA KAEADKI+QVKAAEA+AESKYLSGVGV+RQR+AIV GL+DS+ F+ I GT+PKDVMDLLLLTQYFDML+DVG S S T+FLPHAP +V +Q ++++G M
Sbjct: 4 NQCFCLACVRTNTVALVERCGKFQAIKGPGCQCLVWPVDSIVGRVSLRVRQLDVNCETKTKDNVFVNVVISVQYQVVLEKAFDAFYKLANPEIQIQAYVFDVVRSELPKMELDESFSNKEQLANEVKHHLDETMMSFGYSIIKALVTDISPDARVKMSMNEINASRRLREAAKEKAEADKIVQVKAAEADAESKYLSGVGVARQRQAIVGGLQDSIIEFSGEIAGTTPKDVMDLLLLTQYFDMLKDVGSSGSGGKTLFLPHAPSAVGDLQDSLKNGLM 281
BLAST of mRNA_E_fasciculatus_S2_contig7073.15241.1 vs.
Match: Hypothetical (protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BRL8_9STRA) HSP 1 Score: 337 bits (864), Expect = 9.530e-112 Identity = 176/280 (62.86%), Postives = 219/280 (78.21%), Query Frame = 1
Query: 280 CFQCVSNSEVGVVERLGKFTGLAAPGLNCILWPIDNIVAKISTRVQQLDVRMETKTKDNVFVTAVVSVQYQPIKEKIYDAFYRLTDPQAQIRSYVFDVVRSTLPKLDLDQAFDSKEDIAVAVKNQLEEVMKEYGYMILQALVTDMDPDPRVKEAMNEINASKRMREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQTFAETIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVAAIQAAMRDGFMQGQAGST 1119
C QC+ SE+G+VERLGK+ L G+N PI+ + K+S RVQ LDVR ETKT+DNVFV VSVQYQ K+KIYDAFYRL++P QIR+YVFD+VRS LP + LD+AF++KE +A+ VK L VM EYG++I+QALVTD+ PD +VK AMNEINASKRM+EAA+ KAEADK++ VKAAEA+AESKYLSGVGV+RQRKAIVDGLRDS++ F+ + GT+PKDV+DLLLLTQYFDML++VG ATVFLP S +A +MRD +Q QAG +
Sbjct: 7 CVQCIQTSEIGIVERLGKYDRLQNAGINFFCCPIEYLAGKVSLRVQALDVRCETKTEDNVFVEVNVSVQYQVQKDKIYDAFYRLSNPTQQIRAYVFDIVRSVLPAMPLDEAFEAKEHVALEVKKALSAVMDEYGFVIVQALVTDIAPDAKVKNAMNEINASKRMKEAASEKAEADKVLLVKAAEADAESKYLSGVGVARQRKAIVDGLRDSIKQFSGNVQGTTPKDVIDLLLLTQYFDMLKEVGNHEYTATVFLP----SESANGTSMRDSLLQAQAGQS 282
BLAST of mRNA_E_fasciculatus_S2_contig7073.15241.1 vs.
Match: Hypersensitive-induced (response protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TM34_9STRA) HSP 1 Score: 329 bits (843), Expect = 1.350e-108 Identity = 163/277 (58.84%), Postives = 212/277 (76.53%), Query Frame = 1
Query: 280 CFQCVSNSEVGVVERLGKFTGLAAPGLNCILWPIDNIVAKISTRVQQLDVRMETKTKDNVFVTAVVSVQYQPIKEKIYDAFYRLTDPQAQIRSYVFDVVRSTLPKLDLDQAFDSKEDIAVAVKNQLEEVMKEYGYMILQALVTDMDPDPRVKEAMNEINASKRMREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQTFAETIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVAAIQAAMRDGFMQGQA 1110
C QC+ S +G+ ER G F + PG+N I WPIDN+V ++S RVQQL TKTKDNVFV V VQYQ I + YDA+Y+LTDP QIRSYV D+VRST+PK++LD AF++KE++A A+++ L++ M YGY I+Q+LV D+ D +VK AMNEINASKR+REAA KAEADKI+QVKAAEA AESKYL+G+G++R+RKAIVDGLR SV+ F+ET++G +PKDVMDL+LLTQYFDML+DVG + T+F+ H P +V ++ +R G MQ A
Sbjct: 7 CLQCIDTSTLGIQERFGNFVRILPPGMNLICWPIDNVVGRVSARVQQLVCDCGTKTKDNVFVAVQVIVQYQVIVSQAYDAYYKLTDPNLQIRSYVEDIVRSTVPKMELDMAFEAKEELAHAIRDSLQQTMGTYGYTIIQSLVLDIRVDEKVKTAMNEINASKRLREAAAEKAEADKIVQVKAAEASAESKYLNGMGIARERKAIVDGLRGSVEEFSETVEGATPKDVMDLILLTQYFDMLKDVGNNPTPTTLFMTHGPSAVTELKEQLRAGIMQNAA 283
BLAST of mRNA_E_fasciculatus_S2_contig7073.15241.1 vs.
Match: Hypothetical (protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V9W2_9STRA) HSP 1 Score: 328 bits (841), Expect = 2.530e-108 Identity = 164/260 (63.08%), Postives = 212/260 (81.54%), Query Frame = 1
Query: 280 CFQCVSNSEVGVVERLGKFTGLAAPGLNCILWPIDNIVAKISTRVQQLDVRMETKTKDNVFVTAVVSVQYQPIKEKIYDAFYRLTDPQAQIRSYVFDVVRSTLPKLDLDQAFDSKEDIAVAVKNQLEEVMKEYGYMILQALVTDMDPDPRVKEAMNEINASKRMREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQTFAETIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQS 1059
CF VS +EVGVVER GKF+ L PGLNC++ P++ +V ++S RVQQLDVR+ETKT DNVF+TAVVSVQYQ ++EK+YDAFY LT+P QI ++V+DVVRS LP L+LD F++KE++A+AVKN L E M YGY ILQ L+TD+DPD RVK AMNEIN+SKR++ A +AE DKI+QVKAAEAE+E+KYLSGVGV++QRKAIVDGL++S+ F++ ++G+S K VMDLLLLTQYFDM+RDVG ++ T F+P + S
Sbjct: 5 CFFTVSTAEVGVVERFGKFSRLVQPGLNCVVCPVEVLVGRLSFRVQQLDVRVETKTLDNVFITAVVSVQYQILREKVYDAFYALTNPTQQITAHVYDVVRSELPLLELDAVFEAKEELALAVKNALSETMGAYGYQILQTLITDLDPDNRVKAAMNEINSSKRLKFAVAERAEGDKILQVKAAEAESEAKYLSGVGVAKQRKAIVDGLKNSIVDFSQEVEGSSTKQVMDLLLLTQYFDMVRDVGAANHCRTTFVPSSKSS 264
BLAST of mRNA_E_fasciculatus_S2_contig7073.15241.1 vs.
Match: Hypothetical (protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PFY3_9STRA) HSP 1 Score: 326 bits (836), Expect = 1.550e-107 Identity = 167/269 (62.08%), Postives = 212/269 (78.81%), Query Frame = 1
Query: 268 NMAFCFQCVSNSEVGVVERLGKFTGLAAPGLNCILWPIDNIVAKISTRVQQLDVRMETKTKDNVFVTAVVSVQYQPIKEKIYDAFYRLTDPQAQIRSYVFDVVRSTLPKLDLDQAFDSKEDIAVAVKNQLEEVMKEYGYMILQALVTDMDPDPRVKEAMNEINASKRMREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQTFAETIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVAAIQ 1074
N CF+ V ++GVVE LG++T + APG CI WPI N+V +S R+QQLDV ETKTKDNVFV V+VQY+ I EK YDA+YRL+DP+ Q+RSYVFDVVRST+P+++LD+AF SKEDIA +V QL VM +YGY I+++LVTD+ PD RVK +MNEINAS+R++EAA +KAEADK+ Q+KAAEAEAESKYLSG+GV+RQRKAIV+GL+DSV F+E ++G SPKDVMD+LLL+QYFD L VG +S + L H P VA +Q
Sbjct: 4 NGCCCFRYVRTQQIGVVETLGQYTKMIAPGCTCIFWPIANVVGTLSLRIQQLDVYCETKTKDNVFVQVAVAVQYRVISEKAYDAYYRLSDPREQVRSYVFDVVRSTVPRMELDEAFASKEDIANSVMEQLTTVMSDYGYEIMESLVTDLSPDARVKASMNEINASRRLKEAAQHKAEADKVKQIKAAEAEAESKYLSGLGVARQRKAIVNGLQDSVGAFSEEVEGASPKDVMDILLLSQYFDTLSAVGANS----LILEHDPAVVAKLQ 268
BLAST of mRNA_E_fasciculatus_S2_contig7073.15241.1 vs.
Match: Flagellar (associated protein n=2 Tax=Coccomyxa TaxID=41891 RepID=I0YKK0_COCSC) HSP 1 Score: 325 bits (833), Expect = 5.770e-107 Identity = 167/292 (57.19%), Postives = 224/292 (76.71%), Query Frame = 1
Query: 271 MAFCFQCVSNSEVGVVERLGKFTGLAAPGLNCILWPI-DNIVAKISTRVQQLDVRMETKTKDNVFVTAVVSVQYQPIKEKIYDAFYRLTDPQAQIRSYVFDVVRSTLPKLDLDQAFDSKEDIAVAVKNQLEEVMKEYGYMILQALVTDMDPDPRVKEAMNEINASKRMREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQTFAETIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVAAIQAAMRDGFMQGQAGSTDTPPPNMQ 1143
M C+ CV N+ V VVER GKF +A PG NCI I +++ +S RVQQLDVR ETKTKDNVFV VVSVQYQ KE +Y AFY+LTD ++QI SYVFDVVR+T+PK+ LD F +KE+IA +VK +L + M +G+MI+Q LVTD++PD +V+ AMNEINA++RMR AA KAEA+K+ VKAAE AE++YL+GVGV+RQR+AIV+GLRDS++ F+ I S +DV++++++TQYFDML+DVG S+R +TVFLPH+P ++A I + +R+GF+QG G+ P P MQ
Sbjct: 1 MGLCYSCVDNASVEVVERFGKFHRIAEPGFNCICCLIGESVAGSLSLRVQQLDVRCETKTKDNVFVNVVVSVQYQVEKENLYSAFYKLTDSRSQITSYVFDVVRATVPKILLDDVFTTKEEIAHSVKEELTKSMSSFGFMIIQTLVTDIEPDMKVRAAMNEINAAQRMRVAAMEKAEAEKVQVVKAAEGNAEAQYLAGVGVARQRQAIVNGLRDSIKNFSSDISDVSSRDVIEMMMITQYFDMLKDVGSSNRNSTVFLPHSPGNIADISSQIRNGFLQGTVGAP--PAPTMQ 290 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7073.15241.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7073.15241.1 >prot_E_fasciculatus_S2_contig7073.15241.1 ID=prot_E_fasciculatus_S2_contig7073.15241.1|Name=mRNA_E_fasciculatus_S2_contig7073.15241.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=388bp ADLFLVPFSGGANLGFPRCFALCAVHRLPYTNNISIHRSSLLVLIQPSSCback to top mRNA from alignment at E_fasciculatus_S2_contig7073:1871..6960+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7073.15241.1 ID=mRNA_E_fasciculatus_S2_contig7073.15241.1|Name=mRNA_E_fasciculatus_S2_contig7073.15241.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5090bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7073:1871..6960+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7073:1871..6960+ >mRNA_E_fasciculatus_S2_contig7073.15241.1 ID=mRNA_E_fasciculatus_S2_contig7073.15241.1|Name=mRNA_E_fasciculatus_S2_contig7073.15241.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1164bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7073:1871..6960+ (Ectocarpus fasciculatus EfasUO2)back to top |