mRNA_E_fasciculatus_S2_contig6989.15125.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig6989.15125.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN2_9PHAE) HSP 1 Score: 564 bits (1454), Expect = 1.330e-198 Identity = 344/426 (80.75%), Postives = 355/426 (83.33%), Query Frame = 1
Query: 1 MSGQADEFCLVEPLASVGGDSGQSAGQPRGAECAVFAPAPTAAPDTPAPPPTGDTPTNAKPCLDGNGDSSSSSGV-GVVHSVLADDELWGPPAGARRPFQARGSGXXXXXXXXXXXXXGAVAPRKAVSPPWTGSVDYGG-CGGGAGRVDGGA---EVDGLREAARAGGGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSTSGINRERQFDGSVTGGTGGSG---SRFG-GRRRSGPGNGRGGLSKKTLNIVTNLKSHTTDVRSREEMEDLEEEKRLXXXXXXFKENLRQKGDDFDHTIRILLLGDSGVGKTSLMTRFSEDKFAPTLISTAGVDYKVQTLDINGKRVRCQIWDTAGQERFHVITRTYYRGAHGIALAYDVTDDDSFKNVNYWMANIQTHAEPGHRMQKMILGNKVDIDIEERAV 1251
MSGQADEFCLVEPLA+VG + GQS GQPRGAEC VFAPAPTAAP+TPAP G T TNA CL+GNG SS+SS GVVHSVLADDELWGPPAGARRPFQARG XXXXXXXXXXXXXGAVA R+A+SPPWTG++DYGG C GGAGRVDGGA E DG REAAR GGGL TSTSGINRERQFDG+VTGGT SRFG GRRRSGPGNGRGGLSKKTLNIVTNLKSHTTDVRSREEMEDLEEE XXXXXX KENLRQKGDDFD TIRILLLGDSGVGKTSLMTRFSEDKFAPTLISTAGVDYKVQTLDINGKRVRCQIWDTAGQERFHVITRTYYRGAHGIALAYDVTDDDSFKNVNYWMANIQTHAEPGHRMQKMILGNKVDI E+RAV
Sbjct: 1 MSGQADEFCLVEPLAAVGINPGQSPGQPRGAECVVFAPAPTAAPNTPAPLLAG-TSTNANSCLNGNGGSSNSSNSSGVVHSVLADDELWGPPAGARRPFQARGX-XXXXXXXXXXXXXGAVASRRAISPPWTGNIDYGGGCSGGAGRVDGGASAAEGDGFREAARVGGGLGLGPAAVAAVTANGVRNTATPRRKR-----TSTSGINRERQFDGTVTGGTXXXXXXXSRFGRGRRRSGPGNGRGGLSKKTLNIVTNLKSHTTDVRSREEMEDLEEEXXXXXXXXXXKENLRQKGDDFDRTIRILLLGDSGVGKTSLMTRFSEDKFAPTLISTAGVDYKVQTLDINGKRVRCQIWDTAGQERFHVITRTYYRGAHGIALAYDVTDDDSFKNVNYWMANIQTHAEPGHRMQKMILGNKVDI--EDRAV 417
BLAST of mRNA_E_fasciculatus_S2_contig6989.15125.1 vs.
Match: Rab8C, (RAB family GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX24_ECTSI) HSP 1 Score: 388 bits (997), Expect = 1.250e-129 Identity = 208/223 (93.27%), Postives = 212/223 (95.07%), Query Frame = 1
Query: 586 TSTSGINRERQFDGSVTGGTGGSGSRFGG-RRRSGPGNGRGGLSKKTLNIVTNLKSHTTDVRSREEMEDLEEEKRLXXXXXXFKENLRQKGDDFDHTIRILLLGDSGVGKTSLMTRFSEDKFAPTLISTAGVDYKVQTLDINGKRVRCQIWDTAGQERFHVITRTYYRGAHGIALAYDVTDDDSFKNVNYWMANIQTHAEPGHRMQKMILGNKVDIDIEERAV 1251
TSTSGINRERQFDG+VTGGTGG+G RFGG RRRSGPGNGRGGLSKKTLNIVTNLKSHTTDVRSREEMEDLE XXXXXX ENLRQKGDDFDHTIRILLLGDSGVGKTSLMTRFSEDKFAPTLISTAGVDYKVQTLDINGKRVRCQIWDTAGQERFHVITRTYYRGAHGIALAYDVTDDDSFKNVNYWMANIQTHAEPGHRMQKMILGNKVDI E+RA+
Sbjct: 41 TSTSGINRERQFDGTVTGGTGGTGGRFGGGRRRSGPGNGRGGLSKKTLNIVTNLKSHTTDVRSREEMEDLEXXXXXXXXXXXXXENLRQKGDDFDHTIRILLLGDSGVGKTSLMTRFSEDKFAPTLISTAGVDYKVQTLDINGKRVRCQIWDTAGQERFHVITRTYYRGAHGIALAYDVTDDDSFKNVNYWMANIQTHAEPGHRMQKMILGNKVDI--EDRAI 261
BLAST of mRNA_E_fasciculatus_S2_contig6989.15125.1 vs.
Match: Ras (family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8W2_9STRA) HSP 1 Score: 200 bits (508), Expect = 2.610e-58 Identity = 97/129 (75.19%), Postives = 110/129 (85.27%), Query Frame = 1
Query: 871 TIRILLLGDSGVGKTSLMTRFSEDKFAPTLISTAGVDYKVQTLDINGKRVRCQIWDTAGQERFHVITRTYYRGAHGIALAYDVTDDDSFKNVNYWMANIQTHAEPGHR--MQKMILGNKVDIDIEERAV 1251
TIRILLLGDSGVGKTSLM R++ED F+P L+STAGVD+KV+ LDING+RVRCQIWDTAGQE+FHVITR YYRGAHGIAL YDV D DSFKNVNYW+ANIQTHA R + K++LGNKVD+ E R V
Sbjct: 2 TIRILLLGDSGVGKTSLMLRYTEDHFSPNLLSTAGVDFKVRHLDINGRRVRCQIWDTAGQEKFHVITRAYYRGAHGIALVYDVADADSFKNVNYWVANIQTHAPAAGREGICKVLLGNKVDLPAEHREV 130
BLAST of mRNA_E_fasciculatus_S2_contig6989.15125.1 vs.
Match: Rab (family gtpase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U9Z1_9STRA) HSP 1 Score: 172 bits (437), Expect = 4.070e-47 Identity = 83/122 (68.03%), Postives = 105/122 (86.07%), Query Frame = 1
Query: 871 TIRILLLGDSGVGKTSLMTRFSEDKFAPTLISTAGVDYKVQ--TLDINGKRVRCQIWDTAGQERFHVITRTYYRGAHGIALAYDVTDDDSFKNVNYWMANIQTHAEPGHRMQKMILGNKVDI 1230
+IRILLLGDSGVGKTSLM R+SE++FAP L+STAGVD+KV+ TL+ + ++V+ QIWDTAGQER HVITRTYY+G+HGIAL Y++TD DSF+NVNYWMANIQ HA G ++ K ++GNK D+
Sbjct: 105 SIRILLLGDSGVGKTSLMMRYSENEFAPCLLSTAGVDFKVRHLTLEESKRKVKVQIWDTAGQERMHVITRTYYKGSHGIALVYNLTDPDSFRNVNYWMANIQQHA--GDKVVKTLIGNKADL 224
BLAST of mRNA_E_fasciculatus_S2_contig6989.15125.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U6W6_9STRA) HSP 1 Score: 169 bits (427), Expect = 9.400e-46 Identity = 79/121 (65.29%), Postives = 99/121 (81.82%), Query Frame = 1
Query: 877 RILLLGDSGVGKTSLMTRFSEDKFAPTLISTAGVDYKVQTLDINGKRVRCQIWDTAGQERFHVITRTYYRGAHGIALAYDVTDDDSFKNVNYWMANIQTHAEPGHRMQKMILGNKVDIDIE 1239
R+LLLGDSGVGKTSLM R+SEDKFAP L+STAGVD+K++ + + KRVR QIWDTAGQE+FHVITR++Y+GAHGI L Y VTD DSF NV YWMANI HA ++++I+GNK D+ ++
Sbjct: 126 RLLLLGDSGVGKTSLMLRYSEDKFAPVLLSTAGVDFKMRRVVLRNKRVRLQIWDTAGQEKFHVITRSFYKGAHGICLVYSVTDLDSFNNVRYWMANIHEHASA--HVRRIIVGNKSDLTLQ 244
BLAST of mRNA_E_fasciculatus_S2_contig6989.15125.1 vs.
Match: Hypothetical (protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SPF5_9STRA) HSP 1 Score: 173 bits (438), Expect = 1.600e-45 Identity = 80/128 (62.50%), Postives = 106/128 (82.81%), Query Frame = 1
Query: 856 DDFDHTIRILLLGDSGVGKTSLMTRFSEDKFAPTLISTAGVDYKVQTLD---INGKRVRCQIWDTAGQERFHVITRTYYRGAHGIALAYDVTDDDSFKNVNYWMANIQTHAEPGHRMQKMILGNKVDI 1230
+D+D+ +++LLLGDSGVGKTSLM RF++++F P L+STAGVD+KV+ L+ GKR++CQIWDTAGQERFHVITRTYYRG+HGIAL YDVT++ SF+ +NYWM NI+ HA G + ++ GNKVD+
Sbjct: 272 EDYDYHVKVLLLGDSGVGKTSLMLRFADNEFQPNLMSTAGVDFKVRYLENQKTKGKRIKCQIWDTAGQERFHVITRTYYRGSHGIALVYDVTNERSFEQINYWMNNIKNHA--GKDVFVVLFGNKVDL 397
BLAST of mRNA_E_fasciculatus_S2_contig6989.15125.1 vs.
Match: Hypothetical (protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PN59_9STRA) HSP 1 Score: 169 bits (428), Expect = 4.620e-45 Identity = 99/211 (46.92%), Postives = 128/211 (60.66%), Query Frame = 1
Query: 709 LSKKTLNIVTNLKSHT-------TDVRSREEME---------------------DLEEEKRLXXXXXX---------FKENLRQKGDDFDHTIRILLLGDSGVGKTSLMTRFSEDKFAPTLISTAGVDYKVQTLDINGKRVRCQIWDTAGQERFHVITRTYYRGAHGIALAYDVTDDDSFKNVNYWMANIQTHAEPGHRMQKMILGNKVDI 1230
LSKKTLNIVTNLK +V S+EE E D +EK+ +NL K + D+ +++LLLGDSGVGKTSLM RF++++F +L+STAGVD+KV+ L+ + KRV+CQIWDTAGQERFHVITR YYRG+HGIAL YD T + SFK + YWM NI+ HA + ++LGNK D+
Sbjct: 80 LSKKTLNIVTNLKDQVESIGIPVNNVLSQEEFEEEALEAEAVAKAATAANPKASDSGKEKKFNYKSGKATRRTSATKISDNL-MKNEGHDYYVKVLLLGDSGVGKTSLMLRFADNQFQESLMSTAGVDFKVRFLEKDNKRVKCQIWDTAGQERFHVITRAYYRGSHGIALVYDATRESSFKQIEYWMENIKKHASSD--VFVVLLGNKTDL 287
BLAST of mRNA_E_fasciculatus_S2_contig6989.15125.1 vs.
Match: Ras-related (gtp-binding protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E6E1_MICCC) HSP 1 Score: 163 bits (412), Expect = 1.190e-44 Identity = 74/130 (56.92%), Postives = 101/130 (77.69%), Query Frame = 1
Query: 862 FDHTIRILLLGDSGVGKTSLMTRFSEDKFAPTLISTAGVDYKVQTLDINGKRVRCQIWDTAGQERFHVITRTYYRGAHGIALAYDVTDDDSFKNVNYWMANIQTHAEPGHRMQKMILGNKVDIDIEERAV 1251
+DH I++LL+GDSGVGK+ L+ RFSED+F + I+T G+D+K++T++++GKRV+ QIWDTAGQERF IT YYRGAHGI L YDVTD+ SF NV WM NI+ HA G + K+++GNK D + E+R +
Sbjct: 8 YDHLIKLLLIGDSGVGKSCLLLRFSEDQFTSSFITTIGIDFKIRTVELDGKRVKLQIWDTAGQERFRTITNAYYRGAHGILLTYDVTDEGSFNNVRNWMRNIEQHASDG--VSKVLVGNKSDAE-EKRVI 134
BLAST of mRNA_E_fasciculatus_S2_contig6989.15125.1 vs.
Match: Aste57867_25075 (protein n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A485LS68_9STRA) HSP 1 Score: 163 bits (412), Expect = 1.420e-44 Identity = 74/130 (56.92%), Postives = 99/130 (76.15%), Query Frame = 1
Query: 862 FDHTIRILLLGDSGVGKTSLMTRFSEDKFAPTLISTAGVDYKVQTLDINGKRVRCQIWDTAGQERFHVITRTYYRGAHGIALAYDVTDDDSFKNVNYWMANIQTHAEPGHRMQKMILGNKVDIDIEERAV 1251
+D +++LL+GDSGVGK+ L+ R+S+D F + I+T G+D+KV+T++++GKRV+ QIWDTAGQERF IT YYRGA GI L YDVTDD SF+NV WM IQ HA P + K+++GNK D+D ERAV
Sbjct: 8 YDLLVKLLLIGDSGVGKSCLLMRYSDDSFTTSFITTIGIDFKVKTIEVDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDDHSFQNVRNWMRQIQQHASPN--VNKILIGNKCDVDPSERAV 135
BLAST of mRNA_E_fasciculatus_S2_contig6989.15125.1 vs.
Match: Uncharacterized (protein n=1 Tax=Eutrema salsugineum TaxID=72664 RepID=V4M9L5_EUTSA) HSP 1 Score: 161 bits (407), Expect = 1.640e-44 Identity = 72/131 (54.96%), Postives = 99/131 (75.57%), Query Frame = 1
Query: 859 DFDHTIRILLLGDSGVGKTSLMTRFSEDKFAPTLISTAGVDYKVQTLDINGKRVRCQIWDTAGQERFHVITRTYYRGAHGIALAYDVTDDDSFKNVNYWMANIQTHAEPGHRMQKMILGNKVDIDIEERAV 1251
D+D+ I++LL+GDSGVGK+ L+ RFS+D F + I+T G+D+K++TL+I+GKR++ QIWDTAGQERF IT YYRGA GI L YDVTD+ SF N+ WM NI+ HA + K+++GNK D+D +R V
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTLEIDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMRNIEQHASDS--VNKILVGNKADMDESKRVV 139 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig6989.15125.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig6989.15125.1 >prot_E_fasciculatus_S2_contig6989.15125.1 ID=prot_E_fasciculatus_S2_contig6989.15125.1|Name=mRNA_E_fasciculatus_S2_contig6989.15125.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=417bp MSGQADEFCLVEPLASVGGDSGQSAGQPRGAECAVFAPAPTAAPDTPAPPback to top mRNA from alignment at E_fasciculatus_S2_contig6989:211..4921- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig6989.15125.1 ID=mRNA_E_fasciculatus_S2_contig6989.15125.1|Name=mRNA_E_fasciculatus_S2_contig6989.15125.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4711bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig6989:211..4921- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig6989:211..4921- >mRNA_E_fasciculatus_S2_contig6989.15125.1 ID=mRNA_E_fasciculatus_S2_contig6989.15125.1|Name=mRNA_E_fasciculatus_S2_contig6989.15125.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1251bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig6989:211..4921- (Ectocarpus fasciculatus EfasUO2)back to top |