mRNA_E_fasciculatus_S2_contig697.15109.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig697.15109.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVF3_9PHAE) HSP 1 Score: 643 bits (1658), Expect = 9.130e-217 Identity = 347/612 (56.70%), Postives = 414/612 (67.65%), Query Frame = 2
Query: 44 PCLEPTGCSKTALVFTGLPLVVVDEVCDGSPDRDSITLTGDLFLFATENI-LFDVGMWTGPF--ANMYCTRHGFECEDSDTAL-SIDGDTCLDMLQFGGFFDGVEVTVPCKGDDDGSLLLDYCFTWKTEGDD-SDCEDIGDIVASPNTACSCDQRKYI--DIKVCPAQTDLEVTWTISNPVCLGDGVDVQIDISGIPTDAGFKYVIEDENEDY----VQGGFLSMPRTIVVPELKPDIGYTIDVTTSF----PDFICKTLSVDLEPICSCNNNDEKCDCISESASDCPSSELICCPQRNVCDLPPSTGEDGGTACGDPHMTGFLGQKFDFTGEDGGWYSIIADSNMNVNMRVTSPVADLPEITYITGLSVLTTDAEGFDHSIVIEVAHPHSLDSCCPAGVWPCLADGALRVFLDGDEALFAPGTVSLGPHVGISAANLPGACRSFGFEKYWERKKLEYASHGRRLGSELSMGEWILGDPTATNMDECLEYVAQAEVEEGGVFAHQSEHASFQIVTPEATIRLSHGRLHQIAMRDPTDQFDLPDHLTWQMNMAVDHNDVSRAAKGVLGETFVSTRDASGRPIMAGIEAIRGKEEDYRVEGPLGMDFVQGVHAS 1834
P P C + L L +V ++CDGS S+T GDL +T N DVGMW G F C +GF+C+ ++ L + D D C D+ Q F G+E TVPC+G++ G L++ YC + KT G D +C+ DI P++ C C + + +KVCP + VT ++ VC+GDG D + IPT AG Y I ++ + G + T L P I Y I++ +F PD C T+++ L P CSC S CP LICC +++ CD+ DG CGDPHMTGFLGQKFDFTGEDGGWYS+IADSNMNVNMRVTSPVADLPEITYITGLSVLTTD +G +HSIVIEV PH+LDS CPAGV PCL DGAL V LDG E+LFAPGTV+LG V +SAANLPGACRSFGFEKYWERKKLE A GR L + SMGEWILGDPTATNM+EC+EYVA+AE EEGGVFAHQSEH SFQIVTP+AT+RLSHGRLHQIAMRDPTD+FDLPDHLTWQMNMA+ H DVS AAKG+LG+TFV TRDA G+PIM G+EAIRG EEDYRV+G LG+DFVQ H S
Sbjct: 25 PSSLPCSCFRQ-LPANALDVVPPSQLCDGSVT--SVTFKGDLTFDSTGNGGRQDVGMWLGEFNPPGGQCRVYGFQCDGTEFDLENYDDDICADVQQGLTKFKGIEFTVPCEGNEAGELVVPYCVSAKTSGQDIEECKTTDDIFPGPDSKCKCPEAPLVISALKVCPDLETISVTPSLVGDVCVGDGSDFLLTFENIPTAAGVSYTIAAKDGSLNIVDIDG---DLDGTTATENLYPTIEYDIELAIAFENDKPD--CGTVTLGLNPTCSCGE------------SGCPDG-LICCEKKDYCDVFGDESVDG-VICGDPHMTGFLGQKFDFTGEDGGWYSVIADSNMNVNMRVTSPVADLPEITYITGLSVLTTDTDGLEHSIVIEVIDPHNLDSSCPAGVSPCLGDGALVVLLDGVESLFAPGTVALGADVEVSAANLPGACRSFGFEKYWERKKLENARAGRLLRTTPSMGEWILGDPTATNMNECVEYVARAEAEEGGVFAHQSEHVSFQIVTPKATVRLSHGRLHQIAMRDPTDRFDLPDHLTWQMNMAIHHEDVSHAAKGILGQTFVPTRDADGKPIMTGLEAIRGSEEDYRVDGALGVDFVQDAHTS 614
BLAST of mRNA_E_fasciculatus_S2_contig697.15109.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5Y7_9PHAE) HSP 1 Score: 465 bits (1197), Expect = 3.610e-152 Identity = 238/314 (75.80%), Postives = 258/314 (82.17%), Query Frame = 2
Query: 905 LPPSTGEDGGTACGDPHMTGFLGQKFDFTGEDGGWYSIIADSNMNVNMRVTSPVADLPEI-------TYITG-----LSVLTTDAEGFDHSIVIEVAHPHSLDSCCPAGVWPCLADGALRVFLDGDEALFAPGTVSLGPHVGISAANLPGACRSFGFEKYWERKKLEYASHGRRLGSELSMGEWILGDPTATNMDECLEYVAQAEVEEGGVFAHQSEHASFQIVTPEATIRLSHGRLHQIAMRDPTDQFDLPDHLTWQMNMAVDHNDVSRAAKGVLGETFVSTRDASGRPIMAGIEAIRGKEEDYRVEGPLGMD 1810
+PP GG PHMTGFLGQKFDFTGEDGGWYSIIADSNMNVNMRVTSP + P Y + LSVLTTDA+G DHSIVIEVA PHSLDS CPAGV PCLADGALRV LDGDEALFA GTVSLG V ISA NLPGACRSFGFEKYWE KKLEYA+ GR+L ++ SMGEWILGDPTATNMDEC+EYVA+AE EEGG+FAHQSEHASFQIVTP AT+RLSHGRLHQIAMRDPTDQ+DLPDHLTWQMN+AVDHN VS AAKG+LGETFV TRDASG+PIM G+EAIRG EED + G + M+
Sbjct: 1 MPPVFSLSGG-----PHMTGFLGQKFDFTGEDGGWYSIIADSNMNVNMRVTSPSSTCPRSPTSQRLGAYSSAVLERRLSVLTTDADGSDHSIVIEVAEPHSLDSSCPAGVSPCLADGALRVLLDGDEALFAHGTVSLGLGVEISAVNLPGACRSFGFEKYWEHKKLEYATGGRQLRTQPSMGEWILGDPTATNMDECVEYVARAEAEEGGMFAHQSEHASFQIVTPAATVRLSHGRLHQIAMRDPTDQYDLPDHLTWQMNLAVDHNQVSYAAKGILGETFVPTRDASGKPIMTGMEAIRGTEEDCKCGGNVMMN 309
BLAST of mRNA_E_fasciculatus_S2_contig697.15109.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW46_9PHAE) HSP 1 Score: 446 bits (1147), Expect = 5.640e-144 Identity = 223/317 (70.35%), Postives = 257/317 (81.07%), Query Frame = 2
Query: 872 LICCPQRN--VCDLPPSTGEDGGTACGDPHMTGFLGQKFDFTGEDGGWYSIIAD-SNMNVNMRVTSPVADLPEITYITGLSVLTTDAEGFDHSIVIEVAHPHSLDSCCPAGVWPCLADGALRVFLDGDEALFAPGTVSLGPHVGISAANLPGACRSFGFEKYWERKKLEYASHGRRLGSELSMGEWILGDPTATNMDECLEYVAQAEVEEGGVFAHQSEHASFQIVTPEATIRLSHGRLHQIAMRDPTDQFDLPDHLTWQMNMAVDHNDVSRAAKGVLGETFVSTRDASGRPIMAGIEAIRGKEEDYRVEGPLGMDF 1813
L CC + + VC P T G ACGDPHMTGFLGQKFDFTGEDGG+Y++I+D NM++NMRVTSPV LPEITYITGLS+LTTDA G HSIVIEV +PH ++S CPAGV PCLADG+LRV L+G E L APG+V+L V ++A NLPG CRSFGFE YWERKKLE A HGR LG E SMG+W+LGDPTATNMDEC+EYVAQAE + GG+FA QSEHASFQIVTP AT+RLSHGRLHQIA RDPT++FDLPDH TWQMNM +DHN+VS +A G+LGET T+DA G+ IM G+EAIRG EEDYRV GPL + F
Sbjct: 65 LKCCDETDPKVCKDPTETS--GPRACGDPHMTGFLGQKFDFTGEDGGYYALISDFPNMHMNMRVTSPVPSLPEITYITGLSLLTTDANGEVHSIVIEVKNPHDIESACPAGVSPCLADGSLRVMLNGKEELSAPGSVALADGVIVTAVNLPGECRSFGFEHYWERKKLENARHGRHLG-EQSMGDWLLGDPTATNMDECMEYVAQAEGQAGGLFALQSEHASFQIVTPTATVRLSHGRLHQIATRDPTNRFDLPDHTTWQMNMGIDHNEVSYSATGILGETSTPTKDAYGQDIMTGMEAIRGSEEDYRVAGPLDVTF 378
BLAST of mRNA_E_fasciculatus_S2_contig697.15109.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7V7_9PHAE) HSP 1 Score: 425 bits (1093), Expect = 3.500e-135 Identity = 222/371 (59.84%), Postives = 262/371 (70.62%), Query Frame = 2
Query: 728 YTIDVTTSFPDFICKTLSVDLEPICSCNNNDEKCDCISESA--SDCPSSEL-ICCPQRNVCDLPPSTGEDGGTACGDPHMTGFLGQKFDFTGEDGGWYSIIADS-NMNVNMRVTSPVADLPEITYITGLSVLTTDAEGFDHSIVIEVAHPHSLDSCCPAGVWPCLADGALRVFLDGDEALFAPGTVSLGPHVGISAANLPGACRSFGFEKYWERKKLEYASHGRRLGSELSMGE---WILGDPTATNMDECLEYVAQAEVE-EGGVFAHQSEHASFQIVTPEATIRLSHGRLHQIAMRDPTDQFDLPDHLTWQMNMAVDHNDVSRAAKGVLGETFVSTRDASGRPIMAGIEAIRGKEEDYRVEGPLGMDFV 1816
Y I + F+ T V + C ND C +E+ +DCP+ E ICCP+ +C P T +D G ACGDPHMTGFLGQKFDF G+DG WY++++D ++ VNMRVTSPV PEITYITGL + T D EG DHS+VI V PHSLDS CP CLADGAL V LDGD AL +PG LGP V ISA NLPGACRSFGFEKYWERKK EY + GRRL ++L M E WILGDPTATNM EC EYV A V+ + G+F + SEH SFQIVTP+ TIRLSHGRLHQ+AMRDPTD+FD+PDHLTWQMN+A D+ D++ A G+LGET T DA+G PIM G+ AIRG +EDY V+GPL FV
Sbjct: 66 YDISIDVDLVAFLAGTGDVSISWYCDHGGNDGYCTTCTEATQDTDCPTDEKPICCPETGLCSHEP-TDDDAG-ACGDPHMTGFLGQKFDFVGQDGEWYAVVSDMPDLEVNMRVTSPVPAEPEITYITGLGIKTRDIEGLDHSLVITVTDPHSLDSACPVQGSTCLADGALTVELDGDVALLSPGEAELGPGVAISAVNLPGACRSFGFEKYWERKKAEYVASGRRLNNDLQMQEMSDWILGDPTATNMAECTEYVLGATVDGQAGLFEYDSEHTSFQIVTPKGTIRLSHGRLHQLAMRDPTDRFDIPDHLTWQMNLAFDNVDLAVDATGILGETQQHTLDANGNPIMEGMAAIRGSQEDYLVDGPLDNVFV 434
BLAST of mRNA_E_fasciculatus_S2_contig697.15109.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRS2_9PHAE) HSP 1 Score: 398 bits (1022), Expect = 1.910e-125 Identity = 205/318 (64.47%), Postives = 244/318 (76.73%), Query Frame = 2
Query: 842 ESASDCPSSELICCPQRNVCDLPPSTGEDGGTACGDPHMTGFLGQKFDFTGEDGGWYSIIAD-SNMNVNMRVTSPVADLPEITYITGLSVLTTDAEGFDHSIVIEVAHPHSLDSCCPAGVWPCLADGALRVFLDGDEALFAPGTVSLGPHVGISAANLPGACRSFGFEKYWERKKLEYA-SHGRRLGS-ELSMGEWILGDPTATNMDECLEYVAQAEVE--EGGVFAHQSEHASFQIVTPEATIRLSHGRLHQIAMRDPTDQFDLPDHLTWQMNMAVDHNDVSRAAKGVLGETFVSTRDASGRPIMAGIEAIRGKEED 1780
E+ +DC S E ICCP + VC+LP T TACGDPHMTGF GQKFDFTG+DG WY +I+D +MN+NMRVT+PV P+ITYITG+S++T D G DHS+VI V PHSL+S CPAGV PCLA+GAL V LDG EAL APG V + P++ +S NLPGACRSFGFEKYWERKKLEYA + GRRL S + MG+WILGDPTATNM EC EYVA+ VE +GG+FAH+SEHASFQIV P AT+RLSHGRLHQIA Q+ LPDH TWQMN+A+D + V A+GVLGET V TRDA G +M G+E+IRG +E+
Sbjct: 26 ETNTDCTSPE-ICCPVKKVCELPLPTDP---TACGDPHMTGFHGQKFDFTGDDGEWYCLISDLPSMNLNMRVTAPVPSRPDITYITGISLITQDGNGLDHSVVITVKDPHSLESSCPAGVTPCLANGALSVSLDGKEALSAPGVVEMAPNMKVSVVNLPGACRSFGFEKYWERKKLEYAQAGGRRLSSKDQDMGDWILGDPTATNMAECTEYVARHVVEGGDGGLFAHKSEHASFQIVMPIATVRLSHGRLHQIA------QYGLPDHSTWQMNLAIDSDSVGVGAQGVLGETLVPTRDADGEYVMHGMESIRGTQEE 333
BLAST of mRNA_E_fasciculatus_S2_contig697.15109.1 vs.
Match: LNR (domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF50_9PHAE) HSP 1 Score: 417 bits (1072), Expect = 1.380e-124 Identity = 222/341 (65.10%), Postives = 253/341 (74.19%), Query Frame = 2
Query: 818 DEKCDCISESA-----SDCPSSELICCPQRNVCDLPPSTGEDGGTACGDPHMTGFLGQKFDFTGEDGGWYSIIAD-SNMNVNMRVTSPVADLPEITYITGLSVLTTDAEGFDHSIVIEVAHPHSLDSCCPAGVWPCLADGALRVFLDGDEALFAPGTVSLGPHVGISAANLPGACRSFGFEKYWERKKLEYA-SHGRRLGSELSMGEWILGDPTATNMDECLEYVAQ--AEVEEGGVFAHQSEHASFQIVTPEATIRLSHGRLHQIAMRDPTDQFDLPDHLTWQMNMAVDHNDVSRAAKGVLGETFVSTRDASGRPIMAGIEAIRGKEEDYRVEGPLGMDF 1813
D DC+ E SDC E CC + VC++ T TACGDPHMTGF GQKFDFTG DG WY +I+D +M++NMRVTSPV+ P+ITYITGLS++TTD +G +HSI+I V P+SLDS C GV PCLADG+L V LDG+E L APG V L V +SA N+PGACRSFGFEKYWERKKLEYA + GRRL + SMGEWILGDPTATNM EC EYVA+ A E+G +F HQSEHASFQIVTP A IRLSHGRLHQIA QF LPDH+TWQMN+AVDHNDVS AKGVLGET V TR SG IM G+EAIRG +EDY VEGPLG+DF
Sbjct: 737 DSASDCVEEPTACEDDSDCTLPEE-CCLLKLVCEVADPTDP---TACGDPHMTGFHGQKFDFTGNDGQWYCLISDLPSMHLNMRVTSPVSSRPDITYITGLSLITTDGDGQEHSIIISVKDPYSLDSDCSPGVSPCLADGSLIVVLDGNETLLAPGAVELASDVMVSAVNIPGACRSFGFEKYWERKKLEYAQAGGRRLSVQQSMGEWILGDPTATNMAECTEYVARHIAGGEDGDLFTHQSEHASFQIVTPAAIIRLSHGRLHQIA------QFGLPDHMTWQMNLAVDHNDVSLNAKGVLGETMVPTRTVSGEYIMHGMEAIRGTQEDYHVEGPLGLDF 1067
BLAST of mRNA_E_fasciculatus_S2_contig697.15109.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRC1_9PHAE) HSP 1 Score: 409 bits (1051), Expect = 2.290e-123 Identity = 270/606 (44.55%), Postives = 331/606 (54.62%), Query Frame = 2
Query: 122 CDGSPDRDSITLTGDLFLFATENILFDVGMWTGPFA--NMYCTRHGFEC-----EDSDTALSIDGDTCLDMLQFGGFFDGVEVTVPCKGDDDGSLLLDYCFTWKTEGDDSDCEDIGDIVASPNTACSCDQRKYIDIKVCPAQTDLEVTWTISNPVCLGDGVDVQIDISGIPTDAGFKYVIEDENEDYVQGGFLSMPRTIVVPELKPDIG-YTIDVTTSFPDFICKTLSVD--------LEP-ICSCNNNDEKC---------DCISESASDCPSSELICCPQRN------------VCDLPPSTGEDGGTACGDPHMTGFLGQKFDFTGEDGGWYSIIAD-SNMNVNMRVTSPVADLPEITYITGLSVLTTDAEGFDHSIVIEVAHPHSLDSCCPAGVWPCLADGALRVFLDGDEALFAPGTVSLGPHVGISAANLPGACRSFGFEKYWERKKLEYA-SHGRRLGSELSMGEWILGDPTATNMDECLEYVAQ--AEVEEGGVFAHQSEHASFQIVTPEATIRLSHGRLHQIAMRDPTDQFDLPDHLTWQMNMAVDHNDVSRAAKGVLGETFVSTRDASGRPIMAGIEAIRGKEEDYRVEGPLGMDF 1813
C G P + + + F+ N+ + + TG A N C +D D S DGDTC V C GS + C T + G D I D+V P + D+ +Y C SN VC DE+ V + VV E PD G YT+ P C +LS D +P +C+C +D DC+ + ASDC C + VC++P T TA GDPHMTGF GQKFDFTG DG WY +I+D +M++NMRVT+PV+ P+ITYITGLS++TTD G +HSI+I V PH+LDS CP GV PCLADG+L V LDG+E LFAPG V L P V +SA N+PGACRSFGFEKYWERKKLEYA + GR L +E SMGEWILGDPTATN++EC EYVA+ A +G +FAHQSEH SFQIVTP A +RLSHGR HQIA + LPDH+TWQMN+AVDHNDVS +AKGVLGET + TR ASG +M G+EAIRG EEDY V+GPLG+ F
Sbjct: 352 CGGDPTSEDDPIVPRVNYFSNPNVTY-LNKSTGTAAADNARCIEDSMVAVSEFRDDGDFVCSDDGDTCT-------------VDSDCCVGFCGSAGI--CATEQCGGAGGDTATIEDMVCDPEN--NVDECQYDGGDCCECDC--------SNQVC-------------------------DEDNTCVTPAW-----DCVVDEALPDNGAYTV------PSGDCPSLSFDDFDNCDYTTQPCLCTCRESDPATALCGSGTGFDCL-DPASDCVKEPTGCVDDGDCTLPEECTLVKLVCEVPILTDP---TAGGDPHMTGFHGQKFDFTGNDGQWYCLISDLPSMHLNMRVTAPVSSRPDITYITGLSLITTDGGGQEHSIIISVKDPHNLDSDCPPGVSPCLADGSLIVVLDGNETLFAPGAVELAPDVKVSAVNIPGACRSFGFEKYWERKKLEYAQAGGRGLLTEQSMGEWILGDPTATNVEECTEYVARHVAGSVDGDLFAHQSEHTSFQIVTPTAVVRLSHGRRHQIA------ELGLPDHVTWQMNLAVDHNDVSLSAKGVLGETLIPTRAASGEYVMHGMEAIRGTEEDYHVDGPLGLGF 885
BLAST of mRNA_E_fasciculatus_S2_contig697.15109.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2W0_9PHAE) HSP 1 Score: 302 bits (773), Expect = 3.830e-91 Identity = 162/280 (57.86%), Postives = 186/280 (66.43%), Query Frame = 2
Query: 956 MTGFLGQKFDFTGEDGGWYSIIADS-NMNVNMRVTSPVADLPEITYITGLSVLTTDAEGFDHSIVIEVAHPHSLDSCCPAGVWPCLADGALRVFLDGDEALFAPGTVSLGPHVGISAANLPGACRSFGFEKYWERKKLEYASHGRRLGSEL---SMGEWILGDPTATNMDECLEYVAQAEVEE-GGVFAHQSEHASFQIVTPEATIRLSHGRLHQIAMRDPTDQFDLPDHLTWQMNMAVDHNDVSRAAKGVLGETFVSTRDASGRPIMAGIEAIRGKEED 1780
MTGF GQKFDFTG+DGGWYS+ +D +++NMR S V +PEITYITGL + TTDA G DH+IVI V PHSLDS CP GV PCLADGAL V LDG AL APG V GP V ISA NLPGACRSFGFE+YWERKK EYA GRRL S +M +WILGDPTATNM EC EYV +A GG+F H EH SFQI+TP TIR + MN+A+D DVS A G+LGET T DA+G PIM G+ +IRG ++D
Sbjct: 1 MTGFRGQKFDFTGQDGGWYSVHSDMPRIHLNMRARSLVPSVPEITYITGLGITTTDANGLDHTIVITVTDPHSLDSACPVGVSPCLADGALTVQLDGKHALLAPGEVLFGPQVAISAVNLPGACRSFGFEEYWERKKQEYARGGRRLPSSTQMQAMSDWILGDPTATNMAECTEYVVEATRNGLGGLFEHDLEHTSFQILTPMGTIRRAMAAFTSFPC----------------MNLAIDRIDVSPNATGILGETQKPTLDANGSPIMQGMASIRGAQDD 264
BLAST of mRNA_E_fasciculatus_S2_contig697.15109.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS96_9PHAE) HSP 1 Score: 184 bits (468), Expect = 4.140e-47 Identity = 120/316 (37.97%), Postives = 174/316 (55.06%), Query Frame = 2
Query: 896 VCDLPPSTGEDGGTACGDPHMTGFLGQKFDFTGEDGGWYSIIADSNM--NVNMRVTSPVAD-LPEITYITGLSVLTTDAEGFDHSIVIEVAHPHSL-DSCCPAGVWPCLADGALRVFLDG---DEAL-FAPGTVSLGPHVGISAANLPGACRSFGFEKYWERKKLEYASHGRRLGSELSMGEWILG-DPTATNMDECLEYVAQAEVEEGGVFAHQSEHASFQIVTPEATIRLSHGRLHQIAMRDPTDQFDLPDHLTWQMNMAVDHNDVSRAA-KGVLGETFVSTRDASGRPIMAGIEAIRGKEEDYRVEGPLGMDF 1813
C+ S G CGDPHM G GQ+ D++G DGGWYS+I D N+ N+N+R+T+P+ D P+ +T L+VL+ HS+VIEV +P+++ + CP GV PCLA+G LR+ +D DE L F+ + +S++NLP C+ FG ++ W R + R L + S+ EWIL D C +Y+A+ ++ + QS+HA F+I TP T+RL+ G +Q D LPD WQM + +D DV A G+LGET D +G+ +M G +A RG EDYRV L + F
Sbjct: 97 TCEASFSVCPPGDAVCGDPHMQGLRGQRIDWSGVDGGWYSLIKDDNIDININVRLTAPLPDEFPDRQLMTSLAVLSKG-----HSVVIEVENPYTVVTNGCPEGVSPCLANGGLRIIVDSQQVDELLRFSRHVPVADGAMTVSSSNLPVECQQFGGDRIWARMYQDMIEGRRELHGDESLEEWILKYDHGMAAPGWCAKYIAENDLAD-----LQSDHAIFKIQTPTVTVRLNAGVNYQGNGELNWDGRVLPDLEFWQMGVGMDGLDVDNPALSGLLGETARPVYDENGQVVMEGFDAFRGTIEDYRVSDALDVHF 402
BLAST of mRNA_E_fasciculatus_S2_contig697.15109.1 vs.
Match: Imm (upregulated 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMW2_ECTSI) HSP 1 Score: 176 bits (445), Expect = 3.850e-45 Identity = 116/306 (37.91%), Postives = 172/306 (56.21%), Query Frame = 2
Query: 944 GDPHMTGFLGQKFDFTGEDGGWYSIIAD--SNMNVNMRVTSPVAD-LPEITYITGLSVLTTDAEGFDHSIVIEVAHPHSL-DSCCPAGVWPCLADGALRVFLDG---DEAL-------FAPGTVSLGPHVGISAANLPGACRSFGFEKYWERKKLEYASHGRRLGSELSMGEWILG-DPTATNMDECLEYVAQAEVEEGGVFAHQSEHASFQIVTPEATIRLSHGRLHQIAMRDPTDQFDLPDHLTWQMNMAVDHNDVSRAA-KGVLGETFVSTRDASGRPIMAGIEAIRGKEEDYRVEGPLGMDF 1813
GDPHM G GQ+ +++G DGGWYS++ D +++++N+RVT+P+ D P+ +T L++++ EG+ S+VIEV +P+++ CP GV PCLA+G LR+ +DG DE L A GT+++ SA+NLP CR FG + W R + R+L S+ EWIL D C +Y+A+ ++ + Q+ HA F+I TP T+RL+ G +Q D LPD WQM++ +D DV A G+LGET +G +M G +A RG EDYRV LG+ F
Sbjct: 14 GDPHMRGLRGQRINWSGVDGGWYSLVKDDHADLSINVRVTAPLPDEFPDRQLMTSLAIMS---EGY--SVVIEVENPYTIVTGGCPEGVSPCLANGGLRIIVDGQEVDELLRFSRQMPVADGTMTM------SASNLPVECRQFGGHRIWARMYQDILEDRRQLRGGESLEEWILRYDQNMPARRWCAKYIAENDLAD-----LQANHAIFKIQTPTVTVRLNAGVNYQGDGELNWDGRVLPDLEFWQMDVGIDGLDVDNPALSGLLGETARPVYGENGEAVMEGSDAFRGTVEDYRVSSALGVHF 303 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig697.15109.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig697.15109.1 >prot_E_fasciculatus_S2_contig697.15109.1 ID=prot_E_fasciculatus_S2_contig697.15109.1|Name=mRNA_E_fasciculatus_S2_contig697.15109.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=543bp MWTGPFANMYCTRHGFECEDSDTALSIDGDTCLDMLQFGGFFDGVEVTVPback to top mRNA from alignment at E_fasciculatus_S2_contig697:15561..25567- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig697.15109.1 ID=mRNA_E_fasciculatus_S2_contig697.15109.1|Name=mRNA_E_fasciculatus_S2_contig697.15109.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=10007bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig697:15561..25567- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig697:15561..25567- >mRNA_E_fasciculatus_S2_contig697.15109.1 ID=mRNA_E_fasciculatus_S2_contig697.15109.1|Name=mRNA_E_fasciculatus_S2_contig697.15109.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1629bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig697:15561..25567- (Ectocarpus fasciculatus EfasUO2)back to top |