mRNA_E_fasciculatus_S2_contig6936.15072.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig6936.15072.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH94_9PHAE) HSP 1 Score: 457 bits (1177), Expect = 1.410e-154 Identity = 258/430 (60.00%), Postives = 293/430 (68.14%), Query Frame = 1
Query: 1 RSTEEFAGKSE-FHPRRNGEQPLPVRVSNFLPETVSHSRWLGLELGHVRSLLFVAVVVAFLALGAMSGRATGCAVRTFVFLSSCTGFDAPTVSVFPSGEEVGHVGPDRVALSQ---NSGRRTTGVQEVRSKRSSAGPSNFSDVAFQISATASNSSPDIVTKTHVSDVFRLVFAVGIEGSGHHYIWGTSEFLFGGETGLPRRGGDHSTDFEKYYAPVMMGGETKTFTTTSLEAMEDMRHIAEWAATLSSPGGLEFLFFPRFCSYPLNPGPLKVMQYIDLRRVAENAEGEGIDLRVVYLRRSAKDIVITNTVHRSFHLRMGHKEGTRSEEELFVEYMRVLFTDIAVVHSFLSEIGSEFIVCHDWDRLGSTEQASRIANFISPNEEIVGLVESVLVQTARNLSNTDALPFEDADALVSRLQRKLDAYEPIYCG 1278
RSTEEFAGK E HPRRN EQ LP R+ N L ETVS +RW LEL V SLLFV VVV L L GR TG FDAP VG DR +LSQ + RR T VQEVR +S PS+ DVA Q S T SNSS I+ KTHVSDVFRLVF G+EG+GHHY+ + LFG LPRR G H + +YYAP+ MG K FT +S A+E+MR +AEWAA LSSPG LEF P CSYP+N GPLKVMQY+DL +AE AEG GID RV+YLRRSAK++VI NTVHR FHL MG E T +E LF++YMRVLFTDIAV+HSFL EIG EF+VCHDWDRLG EQAS IA+FISPN+EI LVES LVQTA+ S TD LPFEDA A+V RLQRKLDA+E +YCG
Sbjct: 6 RSTEEFAGKPESHHPRRNEEQSLPPRLENLLTETVSPARWWALELRRVWSLLFVGVVVILLTLATTGGRHTG--------------FDAPA-----------DVGRDRASLSQTFSHGERRVTDVQEVRVNFASGNPSDSPDVASQPSTTVSNSSTAILPKTHVSDVFRLVFVAGLEGTGHHYVMWANASLFGDNMNLPRRYG-HGKEIYEYYAPLKMGQNVKQFTMSSHNAVENMRRLAEWAANLSSPGALEFFSIP--CSYPVNSGPLKVMQYMDLGMIAETAEGAGIDFRVLYLRRSAKEVVIANTVHRKFHLLMGDDEETVGQERLFLKYMRVLFTDIAVLHSFLGEIGPEFVVCHDWDRLGDKEQASTIASFISPNDEIASLVESSLVQTAKKSSRTDPLPFEDAYAVVLRLQRKLDAFEHLYCG 407
BLAST of mRNA_E_fasciculatus_S2_contig6936.15072.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZI1_ECTSI) HSP 1 Score: 174 bits (440), Expect = 1.190e-48 Identity = 88/114 (77.19%), Postives = 97/114 (85.09%), Query Frame = 1
Query: 940 MGHKEGTRSEEELFVEYMRVLFTDIAVVHSFLSEIGSEFIVCHDWDRLGSTEQASRIANFISPNEEIVGLVESVLVQTARNLS-NTDALPFEDADALVSRLQRKLDAYEPIYCG 1278
MG E T EE LF+EYMRVLFTDIAV+ SFLSEIG EFIVCHDWDRLG EQAS IA+FI+PN+EI GLVES LVQTAR S NT+ LPFEDADA+VSRLQRKLDA+EP+YCG
Sbjct: 1 MGGDEETVGEERLFLEYMRVLFTDIAVLQSFLSEIGPEFIVCHDWDRLGDKEQASTIAHFIAPNDEIAGLVESSLVQTARKKSSNTNPLPFEDADAVVSRLQRKLDAFEPLYCG 114
BLAST of mRNA_E_fasciculatus_S2_contig6936.15072.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMV3_ECTSI) HSP 1 Score: 102 bits (254), Expect = 9.980e-20 Identity = 72/249 (28.92%), Postives = 114/249 (45.78%), Query Frame = 1
Query: 454 PDIVTKTHVSDVFRLVFAVGIEGSGHHYIWGTSEFLFGGETGLPRRGGDHSTDFEKYYAPVMMGGETKT-FTTTSLEAMEDMRHIAEWAATLSSPGGLEFLFFPR------FCSYPLNPGPLKVMQYIDLRRVAENAEGEGIDLRVVYLRRSAKDIVITNTVHRSFHLRMGHKEGTRSEEELFVEYMRVLFTDIAVVHSFLSEIGSEFIVCHDWDRLGSTEQASRIANFISPNEEIVGLVESVLVQTAR 1179
P +V K VS R++F VG+EG+GHHY +F ++ K P + TK + E ++ ++A + A + G F S+P G K +QY+D R +AE AE G+D+R VYL RSA+ I++++T H H GT F+ R L + AVV S E+G F C ++ + EQ R+A FI+P+E+ +E +++ +
Sbjct: 55 PAVVEKKTVSSQLRVMFLVGLEGTGHHYFLN----VFDDACTTAAVPCANACPIAKALYPSLATPSTKQDYERARRELRRELENLAAYPAEFMTEGQAAIAQFVTCRSKSGMMSFPNFNGNDKALQYVDFRLLAEEAERAGVDVRFVYLARSARSILVSDTQH-------NHYGGT------FMRESRALINNAAVVESTFQELGPGFATCFRYESMSDPEQTHRVARFIAPDEDTAQRLEGKMLENVK 286
BLAST of mRNA_E_fasciculatus_S2_contig6936.15072.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMV4_ECTSI) HSP 1 Score: 98.2 bits (243), Expect = 1.640e-18 Identity = 73/235 (31.06%), Postives = 108/235 (45.96%), Query Frame = 1
Query: 454 PDIVTKTHVSDVFRLVFAVGIEGSGHHYIWGTSEFLFGGE-TGLPRRGGDHSTDFEKYYAPVMMGGETKTFTTTSLEAMEDMRHIA--------EWAATLSSPGGLEFLFFPRFCSYPLNPGPLKVMQYIDLRRVAENAEGEGIDLRVVYLRRSAKDIVITNTVHRSFHLRMGHKEGTRSEEELFVEYMRVLFTDIAVVHSFLSEIGSEFIVCHDWDRLGSTEQASRIANFISPN 1131
P +V K VS R+VF VG+EG+GHHY+ E + + P+ + Y + + + E+M +A E +T+ S G F SYP G K +QY+D R VAE AE G+D+R VYL RSA DI+ +++ H H G F+ R+L ++AVVHS E+ F C + + QA+R+A F++PN
Sbjct: 96 PVVVEKKAVSSRMRVVFLVGLEGTGHHYMADVLEDVCKKDKVRCPKL----CVMAKVLYPELSLPKSRNAYWDARKRLREEMEKLAAFPEESLAEGESTVVSFGACRFQG-TGMMSYPNFNGDEKALQYVDFRLVAEEAERAGVDMRFVYLARSAADILTSDSGH--------HNYGGS-----FIRESRILLNNLAVVHSTFQELDPSFTTCFRYGEMADPAQAARVAGFLAPN 312
BLAST of mRNA_E_fasciculatus_S2_contig6936.15072.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1E6_ECTSI) HSP 1 Score: 90.1 bits (222), Expect = 9.980e-18 Identity = 46/112 (41.07%), Postives = 71/112 (63.39%), Query Frame = 1
Query: 610 DFEKYYAPVMMGGETKTFTTTSLEAMEDMRHIAEWAATLSSPGGLEFLFFPRFCSYPLNPGPLKVMQYIDLRRVAENAEGEGIDLRVVYLRRSAKDIVITNTVHRSFHLRMG 945
+F K++ M + FT + + + MR +A+ A TL +PG ++ + SYP GP KV QY+DLR +AE AE EG+DLRV+Y++RSAK++++ +TVHR F +G
Sbjct: 17 NFWKFFISTTMRTSSTAFTASWQQGRDQMRDLAQRAQTLPTPGTVQLI--TGGISYPCGNGPQKVQQYVDLRLLAEAAEAEGVDLRVLYMKRSAKELLLADTVHRGFQNFLG 126
BLAST of mRNA_E_fasciculatus_S2_contig6936.15072.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIA1_9PHAE) HSP 1 Score: 92.0 bits (227), Expect = 3.540e-17 Identity = 67/209 (32.06%), Postives = 99/209 (47.37%), Query Frame = 1
Query: 703 IAEWAATLSSPGGLEFLFFPRFCSYPLNPGPLKVMQYIDLRRVAENAEGEGIDLRVVYLRRSAKDIVITNTVHRSFHLRMGHKEGTRSEEELFVEYMRVLFTDIAVVHSFLSEIGSEFIVCHDWDRLGSTEQASRIANFISPNEEIVG-----LVESVLVQTARNLSNTDALPF--------EDAD----ALVSRLQRKLDAYEPIYCG 1278
+AE +T+ S G F SYP G K +QY+D R VAE AE G+D+R VYL RSA DI+ +++VH H G F+ R+L ++AVVHS E+ F C + + QA+R+A F++PN ++ V +++ N + ED D A+V+RLQ++LD E C
Sbjct: 61 LAEGESTVVSFGACRFQG-TGMMSYPNFNGDEKALQYVDFRLVAEEAERAGVDMRFVYLARSAADILTSDSVH--------HNYGGS-----FIRESRILLNNLAVVHSTFQELDPAFTTCFRYGEMADPAQAARVAGFLAPNNRTAEKLADQMLSHVKIKSPPESGNKQSWGEGGKRLRHPEDVDPPKAAVVTRLQQRLDMVEKDVCS 255
BLAST of mRNA_E_fasciculatus_S2_contig6936.15072.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0A0K6_9DINO) HSP 1 Score: 63.5 bits (153), Expect = 4.060e-7 Identity = 64/222 (28.83%), Postives = 100/222 (45.05%), Query Frame = 1
Query: 490 FRLVFAVGIEGSGHHYIW------GTSEFLFGGETGLPRRGGDHST-----DFE-KYYAP--------VMMGGETKT-FTTTSLEAMEDMRHIAEWAAT---LSSPGGLEFLFFPRFCSYPLNPGPLKVMQYIDLRRVAENAEGEGIDLRVVYLRRSAKDIVITNTVHRSFHLRMGHKEGTRSEEELFVEYMRVLFTDIAVVHSFLSEIGSEFIVCHDWDRL 1083
+RL+F G+EGSGHH +W + L RR T FE K YAP G + + F E +R ++ AT L+S GG + +P F PG LK+ Q D+R +AE AE EG+D R++ L R A ++ + T+HR F G+ + E + +E+ + + + L + F++C ++DRL
Sbjct: 108 WRLLFVAGLEGSGHH-LWIPLLKRCVKARRCAADVELGRRLWTDRTRKGLWSFETKLYAPRAAKKWEYAPPGAKWLSGFRRAEGEVRTALRRLSRRNATSPLLASLGGCGMMSYPNF------PGKLKMFQTPDVRLLAELAEDEGVDFRILVLHRPAAAVLRSTTIHRHF--------GSWNTEAVVLEH------NAQTLLAQLQSLDPAFVLCTEYDRL 308
BLAST of mRNA_E_fasciculatus_S2_contig6936.15072.1 vs.
Match: Hypothetical (protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PR25_9STRA) HSP 1 Score: 57.8 bits (138), Expect = 4.730e-5 Identity = 63/217 (29.03%), Postives = 102/217 (47.00%), Query Frame = 1
Query: 469 KTHVSDVFRLVFAVGIEGSGHHYIWG-TSEFLFGGETGLPRRGGD---HSTDFEKYYAPVMMG------GETKTFTTTSLEAMEDMRHIAEWAATLSSPGGLEFLFFPRFC----SYPLNPGPLKVMQYIDLRRVAENAEGEGIDLRVVYLRRSAKDIVITNTVHRSFHLRMGHKEGTRSEEELFVEYMRVLFTDIAVVHSFLSEIGSEFIVCHDWD 1077
K V RLVF VG+EG+GHH G + L + + D H +AP G +++F T A + M + AT + L + + C SYP G K +Q+ D+ ++AE AE GID RVV L+R A+++VI++ HR F++ GH + ++ E RVL + A +++ ++ + +F C +D
Sbjct: 413 KKTVFSKLRLVFFVGLEGTGHHLWQGIVMKLLKNKQLNAECKLNDLIMHPAG--GCWAPWNNGKGFFCSAASESFKTGYEMAADAMMKLKASNATGTHMLNLVYRGWKGNCGSIASYPCFGGSEKNLQHPDVLKLAELAESIGIDFRVVLLQRKAEELVISDIWHRHFNI--GHPK-------MYEE--RVLENNAASIYTTIATMDPKFYSCTQYD 616 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig6936.15072.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig6936.15072.1 >prot_E_fasciculatus_S2_contig6936.15072.1 ID=prot_E_fasciculatus_S2_contig6936.15072.1|Name=mRNA_E_fasciculatus_S2_contig6936.15072.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=363bp MSGRATGCAVRTFVFLSSCTGFDAPTVSVFPSGEEVGHVGPDRVALSQNSback to top mRNA from alignment at E_fasciculatus_S2_contig6936:1090..3688- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig6936.15072.1 ID=mRNA_E_fasciculatus_S2_contig6936.15072.1|Name=mRNA_E_fasciculatus_S2_contig6936.15072.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2599bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig6936:1090..3688- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig6936:1090..3688- >mRNA_E_fasciculatus_S2_contig6936.15072.1 ID=mRNA_E_fasciculatus_S2_contig6936.15072.1|Name=mRNA_E_fasciculatus_S2_contig6936.15072.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1089bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig6936:1090..3688- (Ectocarpus fasciculatus EfasUO2)back to top |