prot_E_fasciculatus_S2_contig690.15035.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig690.15035.1
Unique Nameprot_E_fasciculatus_S2_contig690.15035.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length213
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig690.15035.1 vs. uniprot
Match: A0A6H5KBZ1_9PHAE (RanBP2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBZ1_9PHAE)

HSP 1 Score: 100 bits (249), Expect = 7.170e-21
Identity = 67/101 (66.34%), Postives = 73/101 (72.28%), Query Frame = 0 
Query:    1 MIRTYRPRLSKDKAVAQRLQDLSTASQIDGVLDNSNPAAAXXXXXXXXXG---------------EADEATGWISGTSPDLPPVLTPMPTLKGFSSGSRSR 86
            M RTYRPRLSKDKAVAQRLQDLSTASQID VLDNS PAA XXXXXXXXX                EAD+AT W+ G SP+LPPV TPMPT KGF++   +R
Sbjct:    1 MSRTYRPRLSKDKAVAQRLQDLSTASQIDRVLDNSTPAAXXXXXXXXXXXXXXXXXXXXXXGGETEADKATTWLGGASPELPPVSTPMPTPKGFNNSRLNR 101
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig690.15035.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KBZ1_9PHAE7.170e-2166.34RanBP2-type domain-containing protein n=1 Tax=Ecto... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig690contigE_fasciculatus_S2_contig690:17688..18414 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig690.15035.1mRNA_E_fasciculatus_S2_contig690.15035.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig690 17688..24092 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig690.15035.1 ID=prot_E_fasciculatus_S2_contig690.15035.1|Name=mRNA_E_fasciculatus_S2_contig690.15035.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=213bp
MIRTYRPRLSKDKAVAQRLQDLSTASQIDGVLDNSNPAAAAAAAAAAAAG
EADEATGWISGTSPDLPPVLTPMPTLKGFSSGSRSRSSSSKGLNRTKTTP
TPKAGSKGSSSRLSQAPAATTPPADAAGAIPSSTASSPASSLITRGSGIR
RRRETPVVSQEGGNDGGSTAAAAAAARPGIASRARSRTWRRPRNAACAAP
STSKHRAPRARR*
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