prot_E_fasciculatus_S2_contig673.14849.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig673.14849.1
Unique Nameprot_E_fasciculatus_S2_contig673.14849.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length547
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig673.14849.1 vs. uniprot
Match: D7G420_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G420_ECTSI)

HSP 1 Score: 332 bits (850), Expect = 9.500e-106
Identity = 341/509 (66.99%), Postives = 349/509 (68.57%), Query Frame = 0 
Query:   50 GAALALSGTHPPFVGSTV--------TADTRNGSTSST----STPFLDLHGATTALSELPAAPEHLGPHDGVLPSPALAGRKRSQPTGGWNSSGDGNDHESXXXXXXXXXXXXXXXXXXRRNHDQDHAEAGPSRFIIQGAAXXXXXXXXXXXXXXXAGCVVGDKTEVGDGFLAAXXXXXXXXXXXXXASEAEEMELDVGDRPVAFPLKTATQQRLGGDASSGSDAPAATFVAEPSTVGPAAVVPAATAEXXXXXXXXXXXXXXXXXXXXXFVPGAAATADGVDGSAADPVSCLGDYNFSFEELNKMSKRYPTVNTLGDQTPMPLLGWLTRELDMNHFDMRCLILRHPRLMAYRVTSHVAPKTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSRSLDKRMLPRAQQMREKDIEPRFGPHKWVVSTYTDAQFTRWLDGRGT 546
            GAALALSGT+PPFVGSTV        T+DTRNGS        S  FLDLHGATT LSEL AA EHLGPHDGVLPSP LAG KRSQPTGGW+SS DGND E                   RRN D DH+EA PSRFI+QGAAXXXXXXXXXXXXXXX                                                                                                           XXXXXX FVPG AA AD VDGSA+DPVSCLGDYNFSFEELNKMSKRYPTVNTLGD+ PMPLLGWLTRELDMNHFDMRCLILRHPRLMAYRVTSHVAPKTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSRSLDKRMLPRAQQMREKDIEPRFGPHKWVVSTYTD QFTRWL+GRGT
Sbjct:    3 GAALALSGTNPPFVGSTVFEAFPTSQTSDTRNGSXXXXXXXGSAAFLDLHGATTPLSELSAASEHLGPHDGVLPSPTLAGCKRSQPTGGWSSSNDGNDQERAAAGADSSRTCM------RRNQDHDHSEARPSRFIMQGAAXXXXXXXXXXXXXXXX----------------------------------------------------------------------------------------------------------XXXXXXVFVPGVAA-ADAVDGSASDPVSCLGDYNFSFEELNKMSKRYPTVNTLGDKAPMPLLGWLTRELDMNHFDMRCLILRHPRLMAYRVTSHVAPKTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSRSLDKRMLPRAQQMREKDIEPRFGPHKWVVSTYTDKQFTRWLEGRGT 398
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BLAST of mRNA_E_fasciculatus_S2_contig673.14849.1 vs. uniprot
Match: A0A6H5KV04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV04_9PHAE)

HSP 1 Score: 238 bits (606), Expect = 6.050e-71
Identity = 184/301 (61.13%), Postives = 197/301 (65.45%), Query Frame = 0 
Query:   50 GAALALSGTHPPFVGSTVTADTRNGSTSS----------TSTPFLDLHGATTALSELPAAPEHLGPHDGVLPSPALAGRKRSQPTGGWNSSGDGNDHESXXXXXXXXXXXXXXXXXXRRNHDQDHAEAGPSRFIIQGAAXXXXXXXXXXXXXXXAGCVVGDKTEVGDGFLAAXXXXXXXXXXXXXASEAEEMELDVGDRPVAFPLKTATQQRLGGDA--SSGSDAPAATFVAEPSTVGPAAVVPAATAEXXXXXXXXXXXXXXXXXXXXXFVPGAAATADGVDGSAADPVSCLGDYNFSFE 338
            GAALALSGT+PPFVGS V    +   TS           +S  FLDLHGATT LSELPA  EHLGPHDGVLPSP LAGRKRSQPTGGW+SS DGND E                   RRN + DH+EA PSRFI+QGAA               A  VVG K EVGDGFLAA             AS AEEMELDVGD PVA+ L+ AT Q+L  DA  S+ S+ PAATFVAEPST GPA VV      XXXXXXXXXXXXXXXXXXXX FVPG AATAD  +GSAADPVSCLGDYNFSFE
Sbjct:    3 GAALALSGTNPPFVGSAVFEAFQTSQTSDXXXXXXXXXXSSAAFLDLHGATTPLSELPAGSEHLGPHDGVLPSPTLAGRKRSQPTGGWSSSNDGNDQERATAGAASSSMCM------RRNQN-DHSEARPSRFIMQGAAAADA-----------AAGVVGVKGEVGDGFLAAGGGSSGTTSSG--ASRAEEMELDVGDTPVAY-LRAATSQQLRDDATRSTSSEVPAATFVAEPSTSGPA-VVXXXXXXXXXXXXXXXXXXXXXXXXXXVFVPGVAATADADNGSAADPVSCLGDYNFSFE 281
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig673.14849.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G420_ECTSI9.500e-10666.99Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KV04_9PHAE6.050e-7161.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003690Transcription termination factor, mitochondrial/chloroplasticSMARTSM00733mt_12coord: 377..409
e-value: 1.6
score: 17.8
coord: 414..446
e-value: 2.2E-5
score: 33.9
coord: 488..519
e-value: 24.0
score: 13.8
coord: 451..483
e-value: 0.35
score: 19.9
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 368..529
e-value: 6.0E-19
score: 68.1
IPR038538MTERF superfamily, mitochondrial/chloroplasticGENE3D1.25.70.10coord: 386..518
e-value: 2.3E-22
score: 81.4
NoneNo IPR availablePANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 443..520
NoneNo IPR availablePANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 358..474
NoneNo IPR availablePANTHERPTHR13068:SF127coord: 358..474
coord: 405..511
NoneNo IPR availablePANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 405..511
NoneNo IPR availablePANTHERPTHR13068:SF127coord: 443..520

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig673contigE_fasciculatus_S2_contig673:7039..12294 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig673.14849.1mRNA_E_fasciculatus_S2_contig673.14849.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig673 6801..12294 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig673.14849.1 ID=prot_E_fasciculatus_S2_contig673.14849.1|Name=mRNA_E_fasciculatus_S2_contig673.14849.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=547bp
MQPLIDEGGAPPRVEAPSPTTAAAADAAASAVAATAAAAVSLPAAFHVPG
AALALSGTHPPFVGSTVTADTRNGSTSSTSTPFLDLHGATTALSELPAAP
EHLGPHDGVLPSPALAGRKRSQPTGGWNSSGDGNDHESAAAVAGADSSSS
SSSTCMRRNHDQDHAEAGPSRFIIQGAAAAAAAAAAAAPASASAGCVVGD
KTEVGDGFLAAGGGGNSGTTSSGGASEAEEMELDVGDRPVAFPLKTATQQ
RLGGDASSGSDAPAATFVAEPSTVGPAAVVPAATAETTAAAAVVAAAAAA
AAAAAAAFVPGAAATADGVDGSAADPVSCLGDYNFSFEELNKMSKRYPTV
NTLGDQTPMPLLGWLTRELDMNHFDMRCLILRHPRLMAYRVTSHVAPKTK
WLRERLGLGQAALRKLVTTYPAVLSRSVEKNLEPKFKWLEERLGASQEEV
AILIKRFPLIFGYSTAQNLEPTVSFFMVDLSGEQEEIKSAIMSCPSILSR
SLDKRMLPRAQQMREKDIEPRFGPHKWVVSTYTDAQFTRWLDGRGT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038538MTERF_sf
IPR003690MTERF