prot_E_fasciculatus_S2_contig6722.14841.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E_fasciculatus_S2_contig6722.14841.1
Unique Name	prot_E_fasciculatus_S2_contig6722.14841.1
Type	polypeptide
Organism	Ectocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length	342

Homology

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BLAST of mRNA_E_fasciculatus_S2_contig6722.14841.1 vs. uniprot
Match: D7FLK8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLK8_ECTSI)

HSP 1 Score: 223 bits (569), Expect = 7.430e-67
Identity = 154/347 (44.38%), Postives = 207/347 (59.65%), Query Frame = 0

Query:    5 SPSTTTANPVIRGPLFALEDVVLYIFVRVQSFFVWILSSVYSRAMAVPVLSNVLRPLSP-PRLAAGSPAAPPPAADLA-SAPARSSGNYGVSGSWSAWSTRGRLAEGLLSAVVLVHAVEE-WTFSSSALAALLVGAILRLSLLFAVLGGLSELWRLWHVSS-HVDGRTCNVERYGMPENHVLNGVDIFEYDYFQKRSNFNARMCKVLGLFYFSSAGVDILNV----VMDDSFAYRVVRLIIVLPWIRVSGKFIFGD--ETYQGTQLFTLKNLCVNQPKCRHVRTFLLARGTIYVVLLHLSPVPSKWAWSLIVTHSTRLLNVLVALQGHSQGVADAAAEIVEHVPEAL 341
            S S      ++   LF+LED+VLYI V V+S+ VWILSS Y RAM VP LS+VLR +S  PR+AAG PAAPP  A+L+ SAP RSS N+ VS S SAWSTRG + EG+L  VV  + +   W      L  +  GAI RL + + V     EL  LW      V+    + ER  +  +  L+G+D  EYD+FQK  +F      ++ +     A + ++ +    ++   F   VV +I    W       ++    +T    + F  + +C+ QP+CRHVR FLLA G IY VLLHLSP PSKW WSLIVTHSTRLL++L+AL+G ++GVA+AA EIV HVPEA+
Sbjct:   19 STSGARLGTIMSRSLFSLEDIVLYIVVAVRSYVVWILSSTYYRAMNVPGLSDVLRQVSSSPRIAAGPPAAPPSPAELSPSAPPRSSCNHRVSESRSAWSTRGCIVEGVLFTVVCGYWMRGLWPLDPLTLGKMFAGAIFRLPVQYIVHHAFPELRWLWSAQVVSVEHTNIDGERVVLLNSTNLDGIDPSEYDFFQKVYSFVVFTFALVTIPGDLGASISVVLISHLSLVFSVFQVAVVIVIYFSCWTICLTHLLYRPFIKTAIYGRFFQWELICMTQPRCRHVRAFLLAGGMIYAVLLHLSPAPSKWTWSLIVTHSTRLLSLLIALRGDNEGVANAAGEIVAHVPEAV 365

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig6722.14841.1 vs. uniprot

BLAST of mRNA_E_fasciculatus_S2_contig6722.14841.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7FLK8_ECTSI	7.430e-67	44.38	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 129..151
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 25..45
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 152..341
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..24
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 46..128

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E_fasciculatus_S2_contig6722	contig	E_fasciculatus_S2_contig6722:4971..6151 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-07-07

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E_fasciculatus_S2_contig6722.14841.1	mRNA_E_fasciculatus_S2_contig6722.14841.1	Ectocarpus fasciculatus EfasUO2	mRNA	E_fasciculatus_S2_contig6722 4971..6151 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E_fasciculatus_S2_contig6722.14841.1 ID=prot_E_fasciculatus_S2_contig6722.14841.1|Name=mRNA_E_fasciculatus_S2_contig6722.14841.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=342bp
MPQQSPSTTTANPVIRGPLFALEDVVLYIFVRVQSFFVWILSSVYSRAMA
VPVLSNVLRPLSPPRLAAGSPAAPPPAADLASAPARSSGNYGVSGSWSAW
STRGRLAEGLLSAVVLVHAVEEWTFSSSALAALLVGAILRLSLLFAVLGG
LSELWRLWHVSSHVDGRTCNVERYGMPENHVLNGVDIFEYDYFQKRSNFN
ARMCKVLGLFYFSSAGVDILNVVMDDSFAYRVVRLIIVLPWIRVSGKFIF
GDETYQGTQLFTLKNLCVNQPKCRHVRTFLLARGTIYVVLLHLSPVPSKW
AWSLIVTHSTRLLNVLVALQGHSQGVADAAAEIVEHVPEAL*