prot_E-fasciculatus_F_contig10872.708.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig10872.708.1
Unique Nameprot_E-fasciculatus_F_contig10872.708.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length356
Homology
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BLAST of mRNA_E-fasciculatus_F_contig10872.708.1 vs. uniprot
Match: A0A6H5L6A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6A5_9PHAE)

HSP 1 Score: 229 bits (583), Expect = 9.260e-64
Identity = 246/337 (73.00%), Postives = 257/337 (76.26%), Query Frame = 0 
Query:   21 MEPRDPRDKRRHRDPAPLNSNLYDRGGRGGMMMMISLSTTSTCPLSVVSKRAKTRAMVLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAPRGXXXXXXXAAGGSRGGQALPRSSRDGSAKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-LDLMDGHLTDSEQDHGYSXXXXXXXXXXXXXXXXXSSWVDQGGVDGGRANAYPWADGDDASAQLNRAGRGEGKGFEESWKGDGEGGEGRPWKHEDLKQLLQDLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGVPRRRPGAGWGPPPNQG 356
            MEPR PRDKRR RD   L+SN    GG GGM+      +TSTCP SVVSKR KTRA+VL                  XXXXXXXXXXXXXXXX APRGXX     +AG SRGGQALPRSSRDGSA+D XXXXXXXXXXXXXXXXXXXXXXXX   XXXXXXXXXX  LDLMDGHLTDSEQDHGYS   XXXXXXXX      SSWVDQGGV+GGRANA  WADGDDASAQ +RAGRGE +GF+ESWKGDGEG EGRPWKHEDLKQLLQDLE      XXXXXXXXXXXXXXXXXXXXXXX X        XXXXXXX DGVPRRRPGAGWG PP+QG
Sbjct:    1 MEPRHPRDKRRRRDAPRLHSNCD--GGNGGMI------STSTCP-SVVSKRDKTRALVLTLLYLCSCPVVSTDSAAPXXXXXXXXXXXXXXXXXAPRGXXATA--SAGSSRGGQALPRSSRDGSAEDVXXXXXXXXXXXXXXXXXXXXXXXXSTGXXXXXXXXXXDHLDLMDGHLTDSEQDHGYSHERXXXXXXXXVQGHPRSSWVDQGGVNGGRANANAWADGDDASAQWSRAGRGEWRGFDESWKGDGEGAEGRPWKHEDLKQLLQDLEDTEIAGXXXXXXXXXXXXXXXXXXXXXXXRXGEGVVAGEXXXXXXXEDGVPRRRPGAGWGTPPSQG 326
[Close]
BLAST of mRNA_E-fasciculatus_F_contig10872.708.1 vs. uniprot
Match: D7FZ23_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ23_ECTSI)

HSP 1 Score: 160 bits (404), Expect = 4.850e-40
Identity = 136/167 (81.44%), Postives = 138/167 (82.63%), Query Frame = 0 
Query:  190 MDGHLTDSEQDHGYSXXXXXXXXXXXXXXXXXSSWVDQGGVDGGRANAYPWADGDDASAQLNRAGRGEGKGFEESWKGDGEGGEGRPWKHEDLKQLLQDLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGVPRRRPGAGWGPPPNQG 356
            MDGHLTDSEQDHGYS                 SSWVDQGGV+GGRAN Y WAD DDASAQ +RAGRGEGKGFEESWK DGEGGEGRPWKHEDLKQLL    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DGVPR RPGAGWG PPNQG
Sbjct:    1 MDGHLTDSEQDHGYSHERYQQQHQHQVQGHPRSSWVDQGGVNGGRANGYGWADRDDASAQWSRAGRGEGKGFEESWKVDGEGGEGRPWKHEDLKQLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDGVPRSRPGAGWGTPPNQG 167
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10872.708.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L6A5_9PHAE9.260e-6473.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZ23_ECTSI4.850e-4081.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..95
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..75
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 96..356
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 76..87
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 88..95
NoneNo IPR availableSUPERFAMILY101447Formin homology 2 domain (FH2 domain)coord: 101..110
NoneNo IPR availableTMHMMTMhelixcoord: 76..98

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig10872contigE-fasciculatus_F_contig10872:263..2411 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig10872.708.1mRNA_E-fasciculatus_F_contig10872.708.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig10872 263..2411 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig10872.708.1 ID=prot_E-fasciculatus_F_contig10872.708.1|Name=mRNA_E-fasciculatus_F_contig10872.708.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=356bp
QTRKTDREEEAMVRSSRLRDMEPRDPRDKRRHRDPAPLNSNLYDRGGRGG
MMMMISLSTTSTCPLSVVSKRAKTRAMVLALLYLCSCPAVSAAAAAPAPP
PPPPPPPPPPPPGDAPRGGGATASAAAGGSRGGQALPRSSRDGSAKDVAA
TASAVAAAAAAAAAADAGGGGSTGGESTAGETTTDHLDLMDGHLTDSEQD
HGYSHERYQQQHQHPRQGHPRSSWVDQGGVDGGRANAYPWADGDDASAQL
NRAGRGEGKGFEESWKGDGEGGEGRPWKHEDLKQLLQDLEDTEIAGAGGA
KRGRGRRRYRSPPPSRPGARGGEGVLSGETDETDDTEDGVPRRRPGAGWG
PPPNQG
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