mRNA_E-fasciculatus_F_contig10855.692.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig10855.692.1
Unique NamemRNA_E-fasciculatus_F_contig10855.692.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig10855.692.1 vs. uniprot
Match: D7FS57_ECTSI (Chloride channel protein EriC n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS57_ECTSI)

HSP 1 Score: 530 bits (1365), Expect = 2.980e-179
Identity = 291/317 (91.80%), Postives = 293/317 (92.43%), Query Frame = 1 
Query:    1 ADVFKGNFPGFGWMKKAPQWSKPIMMAAVTGTVGVFFPQVLFFGYDTLDKLLANTGSYSLPLLCFLCVAKALLTAGALGSGLVGGTFAPSLFLGATAGAAYQRILQGCLTAFRSTAGPSLAAASTSLLPVTSVLGLGGPGGDLSSLLTIAGSPAYAMVGAAAVLSALYRAPLTGSLLLFELTKDYDIVLPLMAAAGVSSLVVELFSRADAPAVQPMPRDMSLEIGLKISGRVDKLMGKIQSLRKRGXXXXXXXRISRELYEQGVTDALVPRILALTADTPLSEAMRAFRLTRNEFAVVVSSSGFDTYQAPSDSSGGG 951
            ADVFKGNFPGFGWMKKAPQWSKPIMMAAVTGTVGVFFPQVLFFGYDTLDKLLANTGSYSLPLLCFLCVAKALLTAGALGSGLVGGTFAPSLFLGATAGAAYQRILQGCLTAFRSTAGPSL AAST LLPVTSVLGLGGPGGDLSSLLTIAGSPAYAMVGAAAVLSALYRAPLTGSLLLFELTKDYDIVLPLMAAAGVSSLVVE+FSRADAPAVQPMPRDMSLEIGLKISG+ DKLMGKIQ             R S E     VTDALVPRILALTADTPL EAMRAFRLTRNEFAVVVSSSGFDTYQAPSDSSGGG
Sbjct:  382 ADVFKGNFPGFGWMKKAPQWSKPIMMAAVTGTVGVFFPQVLFFGYDTLDKLLANTGSYSLPLLCFLCVAKALLTAGALGSGLVGGTFAPSLFLGATAGAAYQRILQGCLTAFRSTAGPSLDAASTFLLPVTSVLGLGGPGGDLSSLLTIAGSPAYAMVGAAAVLSALYRAPLTGSLLLFELTKDYDIVLPLMAAAGVSSLVVEVFSRADAPAVQPMPRDMSLEIGLKISGKADKLMGKIQG--------GGGGRESLESCTSKVTDALVPRILALTADTPLPEAMRAFRLTRNEFAVVVSSSGFDTYQAPSDSSGGG 690
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BLAST of mRNA_E-fasciculatus_F_contig10855.692.1 vs. uniprot
Match: A0A836C8J5_9STRA (Chloride channel n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8J5_9STRA)

HSP 1 Score: 222 bits (566), Expect = 2.510e-62
Identity = 140/301 (46.51%), Postives = 183/301 (60.80%), Query Frame = 1 
Query:    4 DVFKGNFPGFGWMKKAPQWSKPIMMAAVTGTVGVFFPQVLFFGYDTLDKLLANTGSYSLPLLCFLCVAKALLTAGALGSGLVGGTFAPSLFLGATAGAAYQRILQGCLTAFRSTAGPSLAAASTSLLPVTSVLGLGGPGGDLSSLLTIAGSPAYAMVGAAAVLSALYRAPLTGSLLLFELTKDYDIVLPLMAAAGVSSLVVELFS-RADAPAVQPMPRDMSLEIGLKISGRVDKLMGKIQSLRKRGXXXXXXXRISRE--LYEQGVTDALVPRILALTADTPLSEAMRAFRLTRNEFAVVV 897
            DVF+G   GF +M   P+W+KP++ AA+TG +G+ FPQ+LFFGY TLD LLANTG Y    L  LCV KA++TA   GSGLVGGTFAP+LFLGATAGA YQR +   L+A                L     L   G G  ++ LL +A  PAY+MVGAA+VL+A+YRAPLT SLLLFELT+DYDIVLPLMA+AGV+SL+V+L   R++ P  +P+       + L        L+  + S+              R+  +    V DAL+P +L + A+ PLS+A   F+  R   AVVV
Sbjct:  410 DVFQGKQAGFKFMSDVPEWTKPLIGAALTGAIGIVFPQILFFGYQTLDTLLANTGRYGALQLARLCVVKAVMTAVCFGSGLVGGTFAPALFLGATAGACYQRGVVNLLSA----------------LSANPFLFHNGGGAFVNGLLNVAAGPAYSMVGAASVLAAVYRAPLTSSLLLFELTRDYDIVLPLMASAGVASLLVQLVQDRSEQPRQEPVA------LLLPAGAASQPLLKPVPSVPVNYMEMGMSAAAKRQAVISTLAVKDALLPELLLIAANAPLSDAAHLFQHHRCNVAVVV 688
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BLAST of mRNA_E-fasciculatus_F_contig10855.692.1 vs. uniprot
Match: A0A836CI00_9STRA (Chloride channel (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI00_9STRA)

HSP 1 Score: 196 bits (499), Expect = 3.800e-54
Identity = 137/322 (42.55%), Postives = 170/322 (52.80%), Query Frame = 1 
Query:    4 DVFKGNFPGFGWMKKAPQWSKPIMMAAVTGTVGVFFPQVLFFGYDTLDKLLANTGSYSLPLLCFLCVAKALLTAGALGSGLVGGTFAPSLFLGATAGAAYQRILQGCLTAFRSTAGPSLAAASTSLLPVTSVLGLGGPGGDLSSLLTIAGSPAYAMVGAAAVLSALYRAPLTGSLLLFELTKDYDIVLPLMAAAGVSSLVVELFSRADAPA-------------------------VQPMPRDMSLEIGLKISGRVDKLMGKIQSLRKRGXXXXXXXRISRELYEQGVTDALVPRILALTADTPLSEAMRAFRLTRNEFAVV 894
            DVF G   GF +M+  P   KP++ AA TG VG++FPQ+LFFGY+TL  LLANTG Y    L  LC+ KA  TA   GSGLVGGTFAPSLFLGATAGA YQR +   L A  STA                                +A +PAY+MVGAA+VL+A+YRAPLT SLLLFELT+DYDIVLPLMA+AGV+SL+VEL     A                           V P+P    +E+G+ ++ R   +M  +                        V DAL+P +L + A  PLS A   F+  R + AVV
Sbjct:  255 DVFDGTQLGFAFMRDVPAGVKPLIGAAFTGFVGLWFPQILFFGYETLTSLLANTGRYGTLQLLQLCILKAATTAACFGSGLVGGTFAPSLFLGATAGAFYQRGVVMLLAAVSSTA----------------------------HFAQVAAAPAYSMVGAASVLAAVYRAPLTSSLLLFELTRDYDIVLPLMASAGVASLLVELVQSRSAAVLXXXXXXXXXXXLLLSDTETPQFAPVAPVPIGY-VEMGMSVAARRQAVMATL-----------------------AVRDALLPEVLLIAAAAPLSAAAALFQHHRCDVAVV 524
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BLAST of mRNA_E-fasciculatus_F_contig10855.692.1 vs. uniprot
Match: A0A4D9CYP4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CYP4_9STRA)

HSP 1 Score: 168 bits (426), Expect = 4.510e-43
Identity = 103/201 (51.24%), Postives = 132/201 (65.67%), Query Frame = 1 
Query:   19 NFPGFGWMKKAPQWSKPIMMAAVTGTVGVFFPQVLFFGYDTLDKLLANTGSYSLPLLCFLCVAKALLTAGALGSGLVGGTFAPSLFLGATAGAAYQRILQGCLTAFRSTAGPSLAAASTSLLPVTSVLGLGGPGGDLSSLLTIAGSPAYAMVGAAAVLSALYRAPLTGSLLLFELTKDYDIVLPLMAAAGVSSLVVELFSR 621
             +P + +M + P+  KP++  A+ G  G+ FPQ+LFFGY+TLD L+AN  SY   LL  L   KA +TA  L SGLVGG FAPSLFLGATAGAAYQ++L   L A                             G  ++++ IAG PAYAMVGAA+VL++++RAPLTGSLLLFELT+DYDI+LPLMA+AG+ SL+VEL  R
Sbjct:  260 RWPAWNFMGRVPRAFKPMLGGALCGLTGILFPQILFFGYETLDGLIANQ-SYPALLLLGLLALKAGMTALCLASGLVGGLFAPSLFLGATAGAAYQKLLNLFLQA----------------------------SGLAATVIPIAGPPAYAMVGAASVLASMFRAPLTGSLLLFELTRDYDILLPLMASAGMGSLLVELVER 431
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BLAST of mRNA_E-fasciculatus_F_contig10855.692.1 vs. uniprot
Match: A0A7S3XXN0_HETAK (Chloride channel protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXN0_HETAK)

HSP 1 Score: 167 bits (422), Expect = 4.950e-43
Identity = 127/316 (40.19%), Postives = 165/316 (52.22%), Query Frame = 1 
Query:    1 ADVFKG----NFPGFGWMKKAPQWSKPIMMAAVTGTVGVFFPQVLFFGYDTLDKLLANTG-SYSLPLLCFLCVAKALLTAGALGSGLVGGTFAPSLFLGATAGAAYQRILQGCLTAFRSTAGPSLAAASTSLLPVTSVLGLGGPGGDLSSLLTIAGSPAYAMVGAAAVLSALYRAPLTGSLLLFELTKDYDIVLPLMAAAGVSSLVVEL---FSRADAPAVQPMPRDMSLEIGLKISGRVDKLMGKIQSLRKR----------GXXXXXXXRISRELYEQGVTDALVPRILALTADTPLSEAMRAFRLTRNEFAVV 894
            A+ FK     N PG       P+   P++       + + FPQ+LFFGYDTLDKLLANT  SYS   L    V K + T+  LGSGLVGGTFAP+LFLGAT GA Y  ++ G L    ST                           LS  L IA +PAYAMVGA+AVLSAL+RAPLTGSLL+FELT+DYDI+LPLMAAAG++SLVV+       A   A Q      + E    I G +  +  ++ S ++                   R  + L +  V  AL+ R + L + T + EA+  F +   +FA+V
Sbjct:   52 AEAFKKLSDKNSPG----PYVPKHLTPLIGGLFCSLLSLDFPQILFFGYDTLDKLLANTVLSYSTTDLALFVVLKMVATSVCLGSGLVGGTFAPALFLGATTGAVYHNVVAGFLETLTSTL-------------------------SLSKPLIIAYAPAYAMVGASAVLSALFRAPLTGSLLMFELTRDYDIILPLMAAAGIASLVVDSGIKMEEAMEVAAQAKKATAANEEEASIKGGMVAVSSEMSSKKESIIAGVGSEILDEMGVPVGRFDQILKDMTVDKALIRRPVQLCSTTSIKEALAKFAVENCDFAIV 338
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BLAST of mRNA_E-fasciculatus_F_contig10855.692.1 vs. uniprot
Match: A0A7S1GKF0_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GKF0_CYCTE)

HSP 1 Score: 152 bits (385), Expect = 3.100e-41
Identity = 101/211 (47.87%), Postives = 129/211 (61.14%), Query Frame = 1 
Query:    1 ADVFKGNFPGF-------GWMKKAPQWSKPIMMAAVTGTVGVFFPQVLFFGYDTLDKLLANTGSYSLPLLCFLCVAKALLTAGALGSGLVGGTFAPSLFLGATAGAAYQRILQGCLTAFRSTAGPSLAAASTSLLPVTSVLGLGGPGGDLSSLLTIAGSPAYAMVGAAAVLSALYRAPLTGSLLLFELTKDYDIVLPLMAAAGVSSLVVEL 612
            A +F+  F G         W  K P   KP++   + G VG+ FPQ+LFFGY+TL+ LLANT   +   L  L V K L TA + GSGLVGGTFAPSLFLG   GA++  ++ G L ++    G   AAA+T L  +  V                   PAYAMVGAA+VL+AL+RAPLT SLLLFELT+DYD++LPLMA+AGV SLV ++
Sbjct:    4 AQLFQSLFEGSLGPNRVRNWFSKIPSAGKPVLGGLLCGLVGLGFPQILFFGYETLNGLLANTSLPTATSLSLL-VVKTLTTALSAGSGLVGGTFAPSLFLGGMLGASFHNVMAG-LFSYAQAHG---AAAATPLFQLADV-------------------PAYAMVGAASVLAALFRAPLTASLLLFELTRDYDVILPLMASAGVGSLVGDI 190
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BLAST of mRNA_E-fasciculatus_F_contig10855.692.1 vs. uniprot
Match: M2W5F5_GALSU (Chloride channel/carrier, CIC family n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W5F5_GALSU)

HSP 1 Score: 162 bits (409), Expect = 7.420e-41
Identity = 100/207 (48.31%), Postives = 133/207 (64.25%), Query Frame = 1 
Query:    1 ADVFKGNFPGFGWMKKAPQWSKPIMMAAVTGTVGVFFPQVLFFGYDTLDKLLANTGSYSLPLLCFLCVAKALLTAGALGSGLVGGTFAPSLFLGATAGAAYQRILQ----GCLTAFRSTAGPSLAAASTSLLPVTSVLGLGGPGGDLSSLLTIAGSPAYAMVGAAAVLSALYRAPLTGSLLLFELTKDYDIVLPLMAAAGVSSLVVE 609
            ++ F+G      WMK  P  +KP +   + G + +FFPQ+LFFGYDTLD LLA++  + L LL  L   K ++T+ +LGSGLVGGTFAP+LF+GAT GA Y ++L     G L     + G  L++                    +SS+L IAG PAY+MVG AAVLS ++RAPLT SLLLFELT+DY IVLPLMA++G+SS +VE
Sbjct:  348 SNFFQGKLSISEWMKAVPTVTKPFLGGLLNGLIALFFPQILFFGYDTLDALLADS-DFPLQLLFTLLFLKPIVTSLSLGSGLVGGTFAPTLFVGATLGACYAKLLAQIDYGILHVMNQSFGSWLSS-------------------GMSSILLIAGPPAYSMVGMAAVLSGVFRAPLTSSLLLFELTRDYRIVLPLMASSGLSSWLVE 534
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BLAST of mRNA_E-fasciculatus_F_contig10855.692.1 vs. uniprot
Match: A0A7S1UR58_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UR58_9STRA)

HSP 1 Score: 155 bits (392), Expect = 9.960e-41
Identity = 100/202 (49.50%), Postives = 129/202 (63.86%), Query Frame = 1 
Query:   37 WMKKAPQWSKPIMMAAVTGTVGVFFPQVLFFGYDTLDKLLANTGSYSLPLLCFLCVAKALLTAGALGSGLVGGTFAPSLFLGATAGAAYQRILQGCLTAFRSTAGPSLAAASTSLLPVTSVLGLGGPGGDLSSLLTIAGSPAYAMVGAAAVLSALYRAPLTGSLLLFELTKDYDIVLPLMAAAGVSSLVVELFSRADAPAVQ 642
            +M+     +KP++   + G +G+ FPQ+LFFGYDTL+ LLANT S S PLL  L   K   TA + GSGLVGGTFAPSLFLGA  GA++  ++   L    +  G   +A +T +L         G  G       +A  PAYAMVGAA+VL+AL+RAPLT SLLLFELT+DYD++LPLMA+AGV SLV +L   A   A +
Sbjct:  116 YMRDLRPEAKPVIGGLLCGLIGLAFPQILFFGYDTLNGLLANT-SQSTPLLLSLLFVKLGTTALSAGSGLVGGTFAPSLFLGAMLGASFHNVMSWLL---HTAVGHGTSATTTLML---------GAAGSFQ----LADMPAYAMVGAASVLAALFRAPLTASLLLFELTRDYDVILPLMASAGVGSLVSDLVEEASVSAAE 300
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BLAST of mRNA_E-fasciculatus_F_contig10855.692.1 vs. uniprot
Match: A0A7S0LY74_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0LY74_9CRYP)

HSP 1 Score: 152 bits (383), Expect = 3.460e-39
Identity = 96/207 (46.38%), Postives = 121/207 (58.45%), Query Frame = 1 
Query:   10 FKGNFPGFGWMKKAPQWSKPIMMAAVTGTVGVFFPQVLFFGYDTLDKLLANTGSYSLPLLCFLCVAKALLTAGALGSGLVGGTFAPSLFLGATAGAAYQRILQGCLTAFRSTAGPSLAAASTSLLPVTSVLGLGGPGGDLSSLLTIAGSPAYAMVGAAAVLSALYRAPLTGSLLLFELTKDYDIVLPLMAAAGVSSLVVELFSRADA 630
            + G  PGF +M   P+  +P++ A + G V   FPQVLFFGY+TL  +L N   YS   L  L   K +LTA +LGSGLVGG FAPSLFLG+T GAAY  +L                             GLG           IAG+ +YAMVGAAAVL+A +RAP+TG LLLFELT+DYDIVLPLMA+ G+ ++ ++L   A A
Sbjct:  177 YAGRIPGFEFMAAIPKEVRPMVGALLCGIVAARFPQVLFFGYETLGSILKNAEGYSPESLLTLMSLKLVLTASSLGSGLVGGIFAPSLFLGSTLGAAYGNLLHSA--------------------------GLG-----------IAGASSYAMVGAAAVLAATFRAPITGILLLFELTRDYDIVLPLMASVGIGTVTIDLLEPAYA 346
[Close]
BLAST of mRNA_E-fasciculatus_F_contig10855.692.1 vs. uniprot
Match: A0A7S0ZAY3_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZAY3_9RHOD)

HSP 1 Score: 145 bits (366), Expect = 6.520e-38
Identity = 95/212 (44.81%), Postives = 129/212 (60.85%), Query Frame = 1 
Query:   16 GNFPGFGWMKKAPQWSKPIMMAAVTGTVGVFFPQVLFFGYDTLDKLLANTGSYSLPLLCFLCVAKALLTAGALGSGLVGGTFAPSLFLGATAGAAYQRILQ----GCLTAFRSTAGPSLAAASTSLLPVTSVLGLGGPGGDLSSLLTIAGSPAYAMVGAAAVLSALYRAPLTGSLLLFELTKDYDIVLPLMAAAGVSSLVVELFSRADAPAV 639
            G  PG   ++K P + KP +     G V V++PQ+LFFGYDTLD LLA+   + L LL  L + K ++TA +LGSGL+GGTFAP++FLGAT GA+Y ++L+       +     AGP + +A                   +    +IAG PAY++VG AA L+A +RAPLT  LL+FELT+DY I+LPLMA+ G SS +VE    A  PAV
Sbjct:   29 GEAPG---LRKVPAFFKPAIGGVACGIVAVYYPQILFFGYDTLDALLADV-QFPLGLLLTLLLLKPVMTAISLGSGLIGGTFAPTMFLGATLGASYNKLLETGYENAASILYKNAGPDMTSA-------------------VIESFSIAGPPAYSIVGMAAALAAGFRAPLTAFLLMFELTRDYRIILPLMASVGFSSWLVERVE-ARTPAV 216
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10855.692.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FS57_ECTSI2.980e-17991.80Chloride channel protein EriC n=2 Tax=Ectocarpus T... [more]
A0A836C8J5_9STRA2.510e-6246.51Chloride channel n=1 Tax=Tribonema minus TaxID=303... [more]
A0A836CI00_9STRA3.800e-5442.55Chloride channel (Fragment) n=1 Tax=Tribonema minu... [more]
A0A4D9CYP4_9STRA4.510e-4351.24Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S3XXN0_HETAK4.950e-4340.19Chloride channel protein n=2 Tax=Heterosigma akash... [more]
A0A7S1GKF0_CYCTE3.100e-4147.87Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
M2W5F5_GALSU7.420e-4148.31Chloride channel/carrier, CIC family n=1 Tax=Galdi... [more]
A0A7S1UR58_9STRA9.960e-4149.50Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S0LY74_9CRYP3.460e-3946.38Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
A0A7S0ZAY3_9RHOD6.520e-3844.81Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig10855contigE-fasciculatus_F_contig10855:2..4659 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score533.9
Seed ortholog evalue5.6e-149
Seed eggNOG ortholog2880.D7FS57
KEGG rclassRC00311,RC00313
KEGG koko:K01637
KEGG ReactionR00479
KEGG Pathwayko00630,ko01100,ko01110,ko01120,ko01200,map00630,map01100,map01110,map01120,map01200
KEGG ModuleM00012
EggNOG free text desc.voltage-gated chloride channel activity
EggNOG OGsCOG0038@1,KOG0475@2759
EC4.1.3.1
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categoryother localisation
Exons7
Model size1034
Cds size1032
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927586.1566556-CDS-E-fasciculatus_F_contig10855:1..1181622927586.1566556-CDS-E-fasciculatus_F_contig10855:1..118Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10855 2..118 +
1695995608.0675576-CDS-E-fasciculatus_F_contig10855:1..1181695995608.0675576-CDS-E-fasciculatus_F_contig10855:1..118Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10855 2..118 +
1622927586.1738672-CDS-E-fasciculatus_F_contig10855:565..6581622927586.1738672-CDS-E-fasciculatus_F_contig10855:565..658Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10855 566..658 +
1695995608.0784647-CDS-E-fasciculatus_F_contig10855:565..6581695995608.0784647-CDS-E-fasciculatus_F_contig10855:565..658Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10855 566..658 +
1622927586.1915767-CDS-E-fasciculatus_F_contig10855:989..10971622927586.1915767-CDS-E-fasciculatus_F_contig10855:989..1097Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10855 990..1097 +
1695995608.0896132-CDS-E-fasciculatus_F_contig10855:989..10971695995608.0896132-CDS-E-fasciculatus_F_contig10855:989..1097Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10855 990..1097 +
1622927586.2046955-CDS-E-fasciculatus_F_contig10855:1717..19481622927586.2046955-CDS-E-fasciculatus_F_contig10855:1717..1948Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10855 1718..1948 +
1695995608.101247-CDS-E-fasciculatus_F_contig10855:1717..19481695995608.101247-CDS-E-fasciculatus_F_contig10855:1717..1948Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10855 1718..1948 +
1622927586.2186592-CDS-E-fasciculatus_F_contig10855:2392..25631622927586.2186592-CDS-E-fasciculatus_F_contig10855:2392..2563Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10855 2393..2563 +
1695995608.1134424-CDS-E-fasciculatus_F_contig10855:2392..25631695995608.1134424-CDS-E-fasciculatus_F_contig10855:2392..2563Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10855 2393..2563 +
1622927586.2290018-CDS-E-fasciculatus_F_contig10855:2596..26651622927586.2290018-CDS-E-fasciculatus_F_contig10855:2596..2665Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10855 2597..2665 +
1695995608.1273103-CDS-E-fasciculatus_F_contig10855:2596..26651695995608.1273103-CDS-E-fasciculatus_F_contig10855:2596..2665Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10855 2597..2665 +
1622927586.2417076-CDS-E-fasciculatus_F_contig10855:4414..46571622927586.2417076-CDS-E-fasciculatus_F_contig10855:4414..4657Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10855 4415..4657 +
1695995608.1368215-CDS-E-fasciculatus_F_contig10855:4414..46571695995608.1368215-CDS-E-fasciculatus_F_contig10855:4414..4657Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10855 4415..4657 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig10855.692.1prot_E-fasciculatus_F_contig10855.692.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig10855 2..4657 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig10855.692.1

>prot_E-fasciculatus_F_contig10855.692.1 ID=prot_E-fasciculatus_F_contig10855.692.1|Name=mRNA_E-fasciculatus_F_contig10855.692.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=344bp
ADVFKGNFPGFGWMKKAPQWSKPIMMAAVTGTVGVFFPQVLFFGYDTLDK
LLANTGSYSLPLLCFLCVAKALLTAGALGSGLVGGTFAPSLFLGATAGAA
YQRILQGCLTAFRSTAGPSLAAASTSLLPVTSVLGLGGPGGDLSSLLTIA
GSPAYAMVGAAAVLSALYRAPLTGSLLLFELTKDYDIVLPLMAAAGVSSL
VVELFSRADAPAVQPMPRDMSLEIGLKISGRVDKLMGKIQSLRKRGGGGG
GGGRISRELYEQGVTDALVPRILALTADTPLSEAMRAFRLTRNEFAVVVS
SSGFDTYQAPSDSSGGGTGGSGGLPGRRARTGIRPTGTQRRFWP
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mRNA from alignment at E-fasciculatus_F_contig10855:2..4659+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig10855.692.1 ID=mRNA_E-fasciculatus_F_contig10855.692.1|Name=mRNA_E-fasciculatus_F_contig10855.692.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4658bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10855:2..4659+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GCTGACGTGTTTAAGGGAAACTTCCCTGGTTTTGGGTGGATGAAGAAGGC
CCCGCAGTGGTCTAAGCCGATCATGATGGCGGCCGTTACCGGAACGGTTG
GCGTGTTCTTCCCGCAGGTGCTTGGGTGATGTGCTCACGGCCGGTGGGGG
GGGGGGGGGGTAGCGTCGTTCGTGGAGGTGTTGTTTGGGATATGGGTAGT
GGTTTATCGTAGAGAGGATCGATTGGTTCGGCTGCTTATGCGATTAAGGC
TCGGAAGTGGTTCATCGTACGGAGTGGTAGTGCTGACTGCTGTAGCGGGC
TGCTTCTTTGATCAGCCATCCCGCGCGTTGCTGCAGTAGTGGGACACATA
TGTAGATATTTGCCGCGACCTGCAGCAGTAGTGTGCTGTTTTGGATCTAG
CCTCACGCTTCGATGTTGTACCACGCCCTTGACCTAAGTACTGGCCTGTT
TTTGTGGCCCGAACATTTCAACAAGGACCCCCTGTTTCCCAGGTCCGTTA
TTGTGGCCTGAAGAATGCATCAAGGACCCCCTCTATTGCTTTCGCGGCCT
TCCTTCACGTGTAGGTTTTGTTCTTCGGGTACGACACTCTGGACAAGCTC
CTGGCTAATACCGGGTCCTACAGCTTGCCGCTGCTTTGCTTTTTGTGCGT
GGCAAAGGTGAGGTTTTATGGATTTGGTGTTGTTGTTGTTGTTAGTGTCG
TCGTCGGTGATGGTGCTGGCTGTGGTGGGGTTGTTGTTGTTGTTGTTGTT
GTTGTTGCTTGCTGTTGCCGTTGCTGCTATTGTTATTGCTGCTATTGTTG
TTGGCAGTTGCTGTTGATGTTGCCGGCATTTCATTCGGCACCTGATCCAT
CAGCAGGTGCCATTTTGGTCGTGTTTGATGTTGATCCGGAGAGGTACCGC
GTGCGAGCCTTACGTAGAGGGTGGCTGTCCCACCTCCCGCAACTGACATC
ATCCCCATGACTCTCCTCGATGCTGTTGGTGCGTACAGGCTCTGCTGACG
GCAGGTGCGTTGGGCTCGGGTCTCGTCGGCGGGACTTTCGCCCCTTCGCT
GTTCCTAGGGGCGACGGCGGGCGCGGCGTACCAGCGGATACTCCAGGTGG
GTCTTGTGTAACGTGTCCAATCGCACCAAAACCTGTGTCATGTCGTTTGT
CTCCTGTCCTGCTGTCTGGTTTGTCTGCTGAGGTCTGTGTATGGTGCTGC
TTGTTGTAACGGCCGTTCCCTTCCCTTCCAAAGTGGCATCTCGACAGGAC
TCGCAACGTTGTTGCTGCTGCTGCTCTTGCGGCTCTTGTAGGAGACAGGC
CTTAGTTGCGCCGGGAGTGTGCTGCGGTACGATTGGGTTGATGATGCTCC
TAGCCGAACGGTATGAGGATGCGGGCGCGTTTGGTGGGCAGCAGGGGGGC
TTTGGCTGTTGCCGACCGTTCTCGAACGCATCAACTTCTTGAATTCAACT
CCCCCCCGCCCCCCCGTTCGTCAGGACAAGGAATGATTGTGCCCGTCTGG
AGTGTGTACTCAAGACCGGTCGCCTGCTTGGAGACCACGCCCGCCGTCGC
TTTTATGTCCAGTATATAAGGGCCCGATATCATTGGTGAAAGTTTAACTA
ACGTAACTGGCCCCGACGACTACGGCTCGCACACATGACCAAACTTAACG
TAGCATATCCTGCCCCCCCCCCAAAAAACAAACAACCAATCGGCGGCGCC
CCCCCCCGTCCTGAAGGGCTGTTTGACGGCGTTCCGGTCCACCGCTGGGC
CATCCCTGGCTGCCGCGAGCACCTCCCTTCTGCCGGTGACCTCGGTGCTC
GGCCTAGGGGGTCCCGGGGGTGACCTCAGCTCGCTGCTGACTATCGCGGG
GTCCCCGGCGTACGCCATGGTCGGCGCGGCCGCGGTGCTCTCTGCGCTGT
ACCGAGCGCCGCTGACGGGCTCGCTTCTCCTGTTTGAGCTCACGAAGGTG
GGGGCCCCGTGCGTGTTGGTGGTGGGGGGCTACCATCGTGTTTTTTTCTA
CGGTTTCAGGAGTAGGCCGGGGGAGACGTGTGTGTGCGACTGTGTGGGTT
CGTCCGATTGAATGTGTGCTCCTCTGCCGTGTTGCAGCTGGCCCAGTTGG
TGGCCAGCCTGCGTCTTTTATACTCCTTTTTTTCGGCGCGTGTGAGCGTT
GGCCTGTCGAGGGCCTCCATAAAGAAGCCGAATGGACGCGAACTTGAGCC
TTGTCGCGTCTGTGTCGACACCACTTTTCGGCCCTACAAACTAGANNNNN
NNNNNAGCCGACATGGGTGTGGAGTTAACACGTTCAAGGATACCGCTCAC
TTGCTCTCTTGACCTTTGACATCATGCTGCCGCTCAGACTTGTAACCTTA
AGGCCGCCTATTTTTCTTGTCGTGGGCTCGACTGCTTTCAGGACTACGAT
ATCGTGCTGCCGCTCATGGCGGCGGCCGGTGTCTCCTCCCTAGTGGTAGA
GCTCTTCAGCCGCGCCGATGCCCCTGCCGTGCAGCCCATGCCGAGGGATA
TGAGCCTCGAGATCGGGCTCAAGATCTCCGGGAGAGTTGACAAGCTCATG
GGAAAGATCCAGGTGGGTGTTTGGTTGTCGTGGTGGGCAAACCAGTCGTT
GCGTAAAAGGGGGGGCGGGGGTGGGGGGGGGGGGAGAATCTCTCGCGAGT
TGTACGAGCAAGGGGTAAGCAGGCACGTTTGGGTTGTTGTTGTTGTTGTT
GTTGTTGTTGTCGATCCGATCGGTGTCGGTTGTGGCTGTTGTTTGTTGTC
GTTTGTCGGGTTGTTGTGGTGCTTGCTTTGCGACGGCCGAACGAGAAAGC
GGGCGAGCGGTACGAATCGGCCCTGTCGCTGCTATCGCGGCAGCATCACC
AGCACCAGCACCAGCACGCGGCAAGCCATGGAAAATACGAGAGATAAGCA
AACGACATATTCGATCGATCGAGAGAGAGAGAGACAAGGCACACCGGAGG
CTACGGCGGCCTACTGGCAGGCCAATGCGCACGACAAACTAGCAAAGGCG
GAGGCGTCACAGATGTTTCTTCTCTTCCTAGGGCGACTACAGTACCTCCA
CTCCATTGATGTTCTTGCTCCCTCCAGTGCGATGGGTTTCATATTTCGGC
CGGTACCTTAATGCTTTAATGCGACAAGTGCTGCGAACCGGAGAGCGTTT
CTTCGATCGGCGATGCCCTTTTCCGCTTCAGACCCCCCACCCCTCCGGTC
CAACCGTCGACCACGGGCGCAAACGACAACCAACCGCCATGCCACATTTC
TTATTTCGGCCAGCAGTGCTGAGAAGCAGTGCTACGAAAAGGAGAGCGTT
TCGATCGGCGATGCCTGTTTCCTCTGCAGACCCCCCCCTACCCTTCGTTC
GGCCCAACCATCGACCCCGGGCGCAAACGAATATCGACCGGCCGACACAC
AGAGACCCGCCCCGACCACTCCGTGCCGTCTGTCGACACCTTCCTTCCTT
CCTTCGCCCAAGTCCTTCCTTCGGGTGCCATGACCTTCTTCTCTCCCTCT
GCCTGCGGCCCGACGTGGCACATCTCTAACCTTGACCCTCTTCCTCCCCC
CCCTGGCCCACTCCTTCTTCTTCTCACATGGGAACTCCGTCCATTTTGAT
CGACGTCGACCTGGATTATTCTGGCGCCGCTTGTTGTTCCACCGCACCCA
CTACACGTGCGTGTGCGCCGCAACGCGGGCACATTTTTTGGGGGGGGGCG
GTTCTTTGTGCCGCGCACCAACGTAAAGCAACATGTTGTTGTTCACACGT
TTGCTTACGCGCCTGGGAGAGACCGCCAGAGAAAGCAGGTGCCGTGTTTT
TTCTCGAGCGCGAAAGCGCCACCGGTCCGAAACGATCGGGAGGAGCGAGC
ACCCGGCGAATCGAATTCACAAGTAGGCGTGTCGCTCCTGATAGGCCCGG
TCCACGACCCCTCTGCTCGTCCCGCGAAAGGGCTTGTTTCGGGTGCCCCC
AAACGCCTGGTTGGCGTTTCCCTGCGGAATGCCTGAGAGGAAACCTTGGC
GATTGCGCCGCCGCCCCCCGCCCCCCCCGGAAAGACCGATACAATACACC
GACCGAAACAAATCGAAACCGATCTACGGCCAAGGAAAGCGAGGACATGT
CGCCGAACGTTAAATTTACGGTCTCGAGTTGTTCGTTGAGATCGGGGGAG
AGGATGGTGGTGACGACGTTTTTTTTTGTGGGTCGGCGTCGCGACAAACG
TTACCGAGCGTGTACAGTATCGTGCGACTTCCCACCGTCGTACAAGGCTG
CGTCCGGGAAGGAAACTGTGCTCCAAATTCCGGTCACGCGTCAGCAATGA
TTTGCGAGGTTAACGATGCGCACCCTTCCTTTTTGACGCACACGTGCGAC
TCACGTCGGCTGAACGGGTGTACCCCCCCCCCCGCCCCCGCCCCCCCCCT
AATTTTTTGCCAGGTGACGGACGCGCTAGTGCCCCGAATCCTAGCCCTCA
CGGCCGACACCCCCCTTTCTGAGGCAATGCGAGCCTTCCGCCTGACCCGC
AACGAGTTCGCCGTTGTCGTATCGAGCTCGGGTTTCGACACCTACCAGGC
GCCGTCGGATTCGTCGGGGGGGGGGACAGGGGGCAGCGGCGGCTTACCGG
GCAGACGGGCACGAACGGGGATACGACCGACTGGCACGCAGAGACGCTTT
TGGCCGAG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig10855:2..4659+

>mRNA_E-fasciculatus_F_contig10855.692.1 ID=mRNA_E-fasciculatus_F_contig10855.692.1|Name=mRNA_E-fasciculatus_F_contig10855.692.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2064bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10855:2..4659+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GCTGACGTGTTTAAGGGAAACTTCCCTGGTTTTGGGTGGATGAAGAAGGC
CCCGCAGTGGTCTAAGCCGATCATGATGGCGGCCGTTACCGGAACGGTTG
GCGTGTTCTTCCCGCAGGCTGACGTGTTTAAGGGAAACTTCCCTGGTTTT
GGGTGGATGAAGAAGGCCCCGCAGTGGTCTAAGCCGATCATGATGGCGGC
CGTTACCGGAACGGTTGGCGTGTTCTTCCCGCAGGTTTTGTTCTTCGGGT
ACGACACTCTGGACAAGCTCCTGGCTAATACCGGGTCCTACAGCTTGCCG
CTGCTTTGCTTTTTGTGCGTGGCAAAGGTTTTGTTCTTCGGGTACGACAC
TCTGGACAAGCTCCTGGCTAATACCGGGTCCTACAGCTTGCCGCTGCTTT
GCTTTTTGTGCGTGGCAAAGGCTCTGCTGACGGCAGGTGCGTTGGGCTCG
GGTCTCGTCGGCGGGACTTTCGCCCCTTCGCTGTTCCTAGGGGCGACGGC
GGGCGCGGCGTACCAGCGGATACTCCAGGCTCTGCTGACGGCAGGTGCGT
TGGGCTCGGGTCTCGTCGGCGGGACTTTCGCCCCTTCGCTGTTCCTAGGG
GCGACGGCGGGCGCGGCGTACCAGCGGATACTCCAGGGCTGTTTGACGGC
GTTCCGGTCCACCGCTGGGCCATCCCTGGCTGCCGCGAGCACCTCCCTTC
TGCCGGTGACCTCGGTGCTCGGCCTAGGGGGTCCCGGGGGTGACCTCAGC
TCGCTGCTGACTATCGCGGGGTCCCCGGCGTACGCCATGGTCGGCGCGGC
CGCGGTGCTCTCTGCGCTGTACCGAGCGCCGCTGACGGGCTCGCTTCTCC
TGTTTGAGCTCACGAAGGGCTGTTTGACGGCGTTCCGGTCCACCGCTGGG
CCATCCCTGGCTGCCGCGAGCACCTCCCTTCTGCCGGTGACCTCGGTGCT
CGGCCTAGGGGGTCCCGGGGGTGACCTCAGCTCGCTGCTGACTATCGCGG
GGTCCCCGGCGTACGCCATGGTCGGCGCGGCCGCGGTGCTCTCTGCGCTG
TACCGAGCGCCGCTGACGGGCTCGCTTCTCCTGTTTGAGCTCACGAAGGA
CTACGATATCGTGCTGCCGCTCATGGCGGCGGCCGGTGTCTCCTCCCTAG
TGGTAGAGCTCTTCAGCCGCGCCGATGCCCCTGCCGTGCAGCCCATGCCG
AGGGATATGAGCCTCGAGATCGGGCTCAAGATCTCCGGGAGAGTTGACAA
GCTCATGGGAAAGATCCAGGACTACGATATCGTGCTGCCGCTCATGGCGG
CGGCCGGTGTCTCCTCCCTAGTGGTAGAGCTCTTCAGCCGCGCCGATGCC
CCTGCCGTGCAGCCCATGCCGAGGGATATGAGCCTCGAGATCGGGCTCAA
GATCTCCGGGAGAGTTGACAAGCTCATGGGAAAGATCCAGTCGTTGCGTA
AAAGGGGGGGCGGGGGTGGGGGGGGGGGGAGAATCTCTCGCGAGTTGTAC
GAGCAAGGGTCGTTGCGTAAAAGGGGGGGCGGGGGTGGGGGGGGGGGGAG
AATCTCTCGCGAGTTGTACGAGCAAGGGGTGACGGACGCGCTAGTGCCCC
GAATCCTAGCCCTCACGGCCGACACCCCCCTTTCTGAGGCAATGCGAGCC
TTCCGCCTGACCCGCAACGAGTTCGCCGTTGTCGTATCGAGCTCGGGTTT
CGACACCTACCAGGCGCCGTCGGATTCGTCGGGGGGGGGGACAGGGGGCA
GCGGCGGCTTACCGGGCAGACGGGCACGAACGGGGATACGACCGACTGGC
ACGCAGAGACGCTTTTGGCCGGTGACGGACGCGCTAGTGCCCCGAATCCT
AGCCCTCACGGCCGACACCCCCCTTTCTGAGGCAATGCGAGCCTTCCGCC
TGACCCGCAACGAGTTCGCCGTTGTCGTATCGAGCTCGGGTTTCGACACC
TACCAGGCGCCGTCGGATTCGTCGGGGGGGGGGACAGGGGGCAGCGGCGG
CTTACCGGGCAGACGGGCACGAACGGGGATACGACCGACTGGCACGCAGA
GACGCTTTTGGCCG
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