prot_E-fasciculatus_F_contig1070.560.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1070.560.1
Unique Nameprot_E-fasciculatus_F_contig1070.560.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length314
Homology
BLAST of mRNA_E-fasciculatus_F_contig1070.560.1 vs. uniprot
Match: D7FII9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FII9_ECTSI)

HSP 1 Score: 556 bits (1433), Expect = 4.830e-199
Identity = 286/313 (91.37%), Postives = 297/313 (94.89%), Query Frame = 0
Query:    1 MAPQSSLASGGLHVLLLLCCCIQWSQGFIAVSPCFRRGCSQQTLSSTDDLHKRGSRGSGRHASLIRRRSGGQGFSLRANEAGGGAEEEDDTLELTKGFYSEVAARLGKTAKGKPEDSQEVAXXXXXXXXXXXXXXXXXRARRDFGFEQDLGLELEKRNITKEAEAKKIIDAGLEQMPGVTSSATFLPSSELTPREVVTSVLEALKNNDQPYHNHGVEVFIRFLAPSSAMHGVEMSGVARYLAENRNRAFMHWDTMAFPRPLTVSGGAKQNKAFQPVKLKDTMTGAWHSVSVYLTLDARSNCWLIESCIVKGEV 313
            MAPQ +LA+GGLHVLLLLCCC+QWS GFIAVSPCFRRGCSQQTLSST+DLHKR SRGSGRH SLIRRRSGG GFSL+ANEAGGGAEEEDDTLELTKGFYSE+AARLGKTA+G+P+DSQE A       XXXXXXX   RARRDFGFEQDLGLELEKRNITKEAEAKKIIDAGLEQMPGVTSSATFLPSSELTPREVVTSVLEALKNNDQPYHNHGVEVFIRFLAPSSAMHGVEMSGVARYLAENRNRAFMHW+TMAFPRPLTVSGGAKQNKAFQPVKL+DTMTGAWHSVSVYLTLDARSNCWLIESCIVKGEV
Sbjct:    1 MAPQGNLAAGGLHVLLLLCCCVQWSHGFIAVSPCFRRGCSQQTLSSTNDLHKRESRGSGRHGSLIRRRSGGPGFSLKANEAGGGAEEEDDTLELTKGFYSEIAARLGKTAQGQPQDSQETAKDEDSGSXXXXXXXDELRARRDFGFEQDLGLELEKRNITKEAEAKKIIDAGLEQMPGVTSSATFLPSSELTPREVVTSVLEALKNNDQPYHNHGVEVFIRFLAPSSAMHGVEMSGVARYLAENRNRAFMHWNTMAFPRPLTVSGGAKQNKAFQPVKLRDTMTGAWHSVSVYLTLDARSNCWLIESCIVKGEV 313          
BLAST of mRNA_E-fasciculatus_F_contig1070.560.1 vs. uniprot
Match: A0A7S3WL80_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3WL80_EMIHU)

HSP 1 Score: 68.6 bits (166), Expect = 1.510e-10
Identity = 41/114 (35.96%), Postives = 65/114 (57.02%), Query Frame = 0
Query:  187 PSSELTPREVVTSVLEAL--KNNDQPYHNHGVEVFIRFLAPSSA--MHGVEMSGVARYLAENRNRAFMHWDTMAFPRPLT-VSGGAKQNKAFQPVKLKDTMTGAWHSVSVYLTL 295
            PS+ L+PREV+TSV+E+L   N D+P   +G EV +RFLAP+ A  +   + +G +RYL +     F+ W+   F   +  ++G     +AFQ + L+ + T  W S   +L L
Sbjct:   29 PSAALSPREVITSVMESLHRSNWDRPTECYGFEVAMRFLAPTHAAKLKKAKPTGFSRYLRQQHRIRFVKWNEYRFEGDVARLTGDDGVEEAFQMISLRSSPTAEWCSARFHLVL 142          
BLAST of mRNA_E-fasciculatus_F_contig1070.560.1 vs. uniprot
Match: A0A7R9YD20_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YD20_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 1.610e-9
Identity = 56/197 (28.43%), Postives = 98/197 (49.75%), Query Frame = 0
Query:  139 RARRDFGFEQDLGL----ELEKRNITKEAEA-KKIIDAGLEQMP-GVTSSATF-------LPSSE---LTPREVVTSVLEALKNNDQPYHNHGVEVFIRFLAPSSAMHGVEMSGVARY---LAENRNRAFMHWDTMAFPRPLTVSGGAKQNKAFQPVKLKDTMTGAWHSVSVYLTLDARSN----CWLIESCIVKGE 312
            R R  FG E++        +E +N+T + +A ++++ A L  M   +  +AT        LP+S    LTP  VV S+L+A++ ND PY NHG+EV  RF + +S+    +     +Y   + ++     + WD + F +PL  +G     KA Q ++L+   +  W  V+V   L  R+      WL++S ++  +
Sbjct:   82 RERMGFGVEEEFARVRQQRIEGKNVTGDLDASEELLKATLRAMEQNIAENATAGQLPDIKLPTSPDPALTPGLVVMSILQAMRCNDSPYENHGIEVLTRFTSSASSATDTDEPSFRKYCDFIPKSEYGILLKWDAIRF-KPLEKAG----KKALQKIQLRLADSNEW--VTVKFALSERTTFLGETWLLDSFLIARK 271          
BLAST of mRNA_E-fasciculatus_F_contig1070.560.1 vs. uniprot
Match: A0A7S0K9M8_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0K9M8_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 2.800e-6
Identity = 42/131 (32.06%), Postives = 66/131 (50.38%), Query Frame = 0
Query:  186 LPSSELTPREVVTSVLEALKNNDQPYHNHGVEVFIRFLAPSSAMHGVEMSGVARYLAE------NRNRAFMHWDTMAFPRPLTVSGGAKQNKAFQPVKLKDTMTGAWHSVSVYLTLDARSNCWLIESCIVK 310
            +P +ELT  EVVT VLEAL+NND P  N GVE+   + + +S +  +E +       E      ++     H D + F +         + +AF  V+L D M     SV+  L+  +  +CWLI+S +V+
Sbjct:  243 VPDAELTAGEVVTVVLEALRNNDNPSTNRGVEILFAYSSSASILADLERAPSVEEYGEMLRTSPDQKILLEHVDVL-FDK---ADYSQDKKRAFITVRLMD-MEKTLTSVNFILSTGSSDDCWLIDSHLVR 368          
BLAST of mRNA_E-fasciculatus_F_contig1070.560.1 vs. uniprot
Match: A0A7S2A8Z1_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A8Z1_TRICV)

HSP 1 Score: 55.8 bits (133), Expect = 4.290e-6
Identity = 42/134 (31.34%), Postives = 65/134 (48.51%), Query Frame = 0
Query:  190 ELTPREVVTSVLEALKNNDQPYHNHGVEVFIRFLAPSSAM------HGVEMSGVARYLAENRNRA-FMHWDTMAFPRPLTVSGGAKQNKAFQPVKLKDTMTGAWHSVSVYLTLDARSN----CWLIESCIVKGE 312
            ELT  EVVT+V+ ALKNN+ P  N+GV+V   + +P SA+       G+     A +L ++  +  F H D +      +      + KAF   +L+    G    VSV   L    N    CWL++S +++ E
Sbjct:    2 ELTAGEVVTTVVAALKNNNDPSPNYGVQVLFGYSSPGSAVMSAVRDEGMTPEEYADFLEDSEYKVLFEHEDCVIDKGDYSFD----RKKAFYNARLR-VGPGPLDFVSVNFILSTNGNEEDDCWLVDSMLIRPE 130          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1070.560.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FII9_ECTSI4.830e-19991.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3WL80_EMIHU1.510e-1035.96Hypothetical protein (Fragment) n=1 Tax=Emiliania ... [more]
A0A7R9YD20_9STRA1.610e-928.43Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S0K9M8_9STRA2.800e-632.06Hypothetical protein n=1 Tax=Leptocylindrus aporus... [more]
A0A7S2A8Z1_TRICV4.290e-631.34Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 23..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..313
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..27
score: 0.865

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1070contigE-fasciculatus_F_contig1070:10339..14288 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1070.560.1mRNA_E-fasciculatus_F_contig1070.560.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1070 10339..14288 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1070.560.1 ID=prot_E-fasciculatus_F_contig1070.560.1|Name=mRNA_E-fasciculatus_F_contig1070.560.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=314bp
MAPQSSLASGGLHVLLLLCCCIQWSQGFIAVSPCFRRGCSQQTLSSTDDL
HKRGSRGSGRHASLIRRRSGGQGFSLRANEAGGGAEEEDDTLELTKGFYS
EVAARLGKTAKGKPEDSQEVAEDEDSGSEIDKAIYDELRARRDFGFEQDL
GLELEKRNITKEAEAKKIIDAGLEQMPGVTSSATFLPSSELTPREVVTSV
LEALKNNDQPYHNHGVEVFIRFLAPSSAMHGVEMSGVARYLAENRNRAFM
HWDTMAFPRPLTVSGGAKQNKAFQPVKLKDTMTGAWHSVSVYLTLDARSN
CWLIESCIVKGEV*
back to top