prot_E-fasciculatus_F_contig1065.516.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1065.516.1
Unique Nameprot_E-fasciculatus_F_contig1065.516.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length840
Homology
BLAST of mRNA_E-fasciculatus_F_contig1065.516.1 vs. uniprot
Match: A0A6H5K655_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K655_9PHAE)

HSP 1 Score: 521 bits (1342), Expect = 6.570e-177
Identity = 268/349 (76.79%), Postives = 288/349 (82.52%), Query Frame = 0
Query:  493 ERPNEDSDAPINTRMAAISGFEGEVVAWSFGDGPDVLRNHDLDFELEVPDLGRNVPALIGLCSSSAEVVDGKQCLLHPVVRCLARNGERFDPNLCLRLPVGDEASTESGSDPESDDENADVAFRAYLESKFTVVTREDASSEWVPMDGTIKQAEGGVFVLEVAVPHFCDFALSQDINVSPGCVEVVPLPKLMGKARRSHFHFVNQGEESLVAHCWGTVKKTGFWDSLRFNLGGGATSAHAEFEGHRQRVDTGNGAVYSVEVPRRDPTNP-ENQVPRVFLGTESITVAWTTQRR-QNARRRLAQVWGSSPMQHKHAMVFGPLLDIDTCQVSNLPVDDGESLGKLVKSKVE 839
            + P+EDSDA INTRMAAIS FEGEVVAWSFGD PDVLRNHDLDF+LEVPDLGRNVP LIGLCSSSAEVVDGKQCLLHPVVRCLARNGE FDPNL LRLP+GDEAS ESGSD  SDD   DVA+RAYL SKFTVVTREDASS WVP+DGTI+QAEGGVFVLEVAVPHFCDFALSQ I+V  GC+E+VPLPKL GK RRSHFHFVNQGEE+LVAHC G V+KTGFWD  + NLG GATSA+                   VE P    TNP +++V RVFLGTES+TVAWT+QR  QNAR R+ QVWG SPMQHKHAMVFGPL  IDTCQVSNL VDDGES GKLVKSKVE
Sbjct:    2 DHPDEDSDALINTRMAAISDFEGEVVAWSFGDSPDVLRNHDLDFDLEVPDLGRNVPTLIGLCSSSAEVVDGKQCLLHPVVRCLARNGESFDPNLRLRLPLGDEASMESGSDGASDDXXXDVAYRAYLASKFTVVTREDASSGWVPIDGTIQQAEGGVFVLEVAVPHFCDFALSQGISVPRGCMEIVPLPKLKGKPRRSHFHFVNQGEENLVAHCRGAVEKTGFWDFFKINLGAGATSAN-------------------VEDPAS--TNPNKSEVCRVFLGTESVTVAWTSQRYPQNARHRIPQVWGFSPMQHKHAMVFGPLSGIDTCQVSNLKVDDGESFGKLVKSKVE 329          
BLAST of mRNA_E-fasciculatus_F_contig1065.516.1 vs. uniprot
Match: D8LHD4_ECTSI (Putative leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHD4_ECTSI)

HSP 1 Score: 381 bits (979), Expect = 1.090e-116
Identity = 202/357 (56.58%), Postives = 246/357 (68.91%), Query Frame = 0
Query:  488 ARAIGERPNEDSDAPINTRMAAISGFEGEVVAWSFGDGPDVLRNHDLDFELEVPDLGRNVPALIGLCSSSAEVVDGKQCLLHPVVRCLARNGERFDPNLCLRLPVGDEASTESGSDPESDDENADVAFRAYLESKFTVVTREDASSEWVPMDGTIKQAEGGVFVLEVAVPHFCDFALSQDINVSPGCVEVVPLPKLMGKARRSHFHFVNQGEESLVAHCWGTVKKTGFWDSLRFNLGGGATSAHAEFEGHRQRVDTGNGAVYSVEVPRRDPTNPENQVPRVFLGTESITVAWTTQRRQNA------RRRLAQVWGSSPMQHKHAMVFGPLLDIDTCQVSNLPVDDGESLGKLVKSKV 838
            AR +  +  +  D  ++  MA ISGF+G V+AWSFG  P VLR++  +FELEVP LGRNVPALIGL SSSAEVVDG++CLLHPVV CLAR+GE FDP LCLR PVGD  S ESGSD  SDD  A+V +RAYLES F+ +TR+ ASSEWVP+DGTI+Q + G+FVLEV V HFCDFAL Q I V  G VE+V LP+L  K+RRSH+HFVN G E+LV HCWG  +K GF +S R  LG G     AE E  R  VD     VY V+VP     +P N+   V  G ES+TVA+TTQ+   A         L QVWG+  MQHKHAM+FG L +  +  V NL V+DG ++G+LV+SKV
Sbjct:  418 ARPVATKTRDVRDTTVDGGMAEISGFDGYVMAWSFGQHPAVLRSNGFEFELEVPRLGRNVPALIGLRSSSAEVVDGEKCLLHPVVTCLARSGEVFDPPLCLRFPVGDVNSMESGSDCGSDD--AEVTYRAYLESTFSTLTRKHASSEWVPVDGTIEQTDEGIFVLEVQVSHFCDFALKQAIKVDSGGVELVKLPQLKHKSRRSHYHFVNLGTENLVVHCWGVTRKRGFLESFRLKLGFGLNGGDAEVEATRTLVDAPGTGVYKVDVPGGPVDDPRNEACLVVNGFESLTVAYTTQKTVRAGTLFGSTHELVQVWGTRHMQHKHAMIFGILPE--SALVPNLKVEDGVNVGELVRSKV 770          
BLAST of mRNA_E-fasciculatus_F_contig1065.516.1 vs. uniprot
Match: A0A6H5KIZ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIZ7_9PHAE)

HSP 1 Score: 292 bits (747), Expect = 3.570e-85
Identity = 172/362 (47.51%), Postives = 224/362 (61.88%), Query Frame = 0
Query:  494 RPNEDSDAPINT-----RMAAISGFEGEVVAWSFGDGPDVLRNHDLDFELEV-PDLGRNVPALIGL--CSSSAEVVDGKQCLLHPVVRCLARNGERFDPNLCLRLPVGDEASTESGSDPESDDENADVAFRAYLESKFTVVTREDASSEWVPMDGTIKQAEGGV-FVLEVAVPHFCDFALSQDINVSPGCVEVVPLPKLMGKARRSHFHFVNQGEESLVAHCWGTVKKTGFWDSLRFN----LGGGATSAHAEFEGHRQRVDTGNGAVYSVEVPRRDPTNPENQVPRVFLGTESITVAWTTQRRQNAR-----RRLAQVWGSSPMQHKHAMVFGPLLDIDTCQVSNLPVDDGESLGKLVKSK 837
            R +ED    I T     +M+++  F+G+VVAWSFG+  +VLR+ D +FELEV P L +N PAL+GL  CS SAE V+G+Q LLH V+ CL R GE+FDP L LR PVGDE S ESGS   S D+ A+ A+RA+L+S F+ V R+DASSEWVP+ G I + +GG  F LEV + HFCDF LSQ I+V  G  E++ LPK M  +R++H+HF N G + LV H WG  +K  F + +R N    L GG+  A  E    R  VD      Y V VP    +  + QV R F+  E  TVAWTTQ R +        +L QVWGS+PM   H +V G +    T  ++NL VDDGE +G+LV SK
Sbjct:  210 RYSEDKRLKIGTTHTSSQMSSLQDFKGDVVAWSFGNRAEVLRSPDSEFELEVQPGLNKNYPALVGLGLCSGSAEYVNGEQYLLHCVLTCLTRAGEKFDPPLLLRFPVGDEDSMESGSLDGSQDD-AEEAYRAHLQSTFSAVKRDDASSEWVPIGGDIVRMKGGRDFFLEVKISHFCDFGLSQAIDVEVGYTELIELPKKMFSSRKTHYHFANLGTKPLVFHVWGAGRKEVFVNVVRANAAVDLAGGSVGAEME----RTLVDVPGSGPYEVHVPGEAGSGSKPQVCRKFVDLEKPTVAWTTQERISPSSGVEGHQLVQVWGSTPMLSGHVLVVGAMAPDATPAIANLRVDDGEDVGRLVWSK 566          
BLAST of mRNA_E-fasciculatus_F_contig1065.516.1 vs. uniprot
Match: A0A6H5JX36_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX36_9PHAE)

HSP 1 Score: 80.9 bits (198), Expect = 3.510e-15
Identity = 39/59 (66.10%), Postives = 42/59 (71.19%), Query Frame = 0
Query:    1 MGSTDRDALNNLYEATGGAGWVTKTNWGSSAPLSQWHGVAVNDQGRVVKLVLDSNSLEG 59
            M STDRDAL  LY AT G  W T  NW + APLSQWHGV VNDQGRVV L L  N+L+G
Sbjct:    1 MASTDRDALVALYNATEGGRWSTNRNWNTGAPLSQWHGVHVNDQGRVVALELAENNLQG 59          
BLAST of mRNA_E-fasciculatus_F_contig1065.516.1 vs. uniprot
Match: D8LBY3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBY3_ECTSI)

HSP 1 Score: 90.1 bits (222), Expect = 9.820e-15
Identity = 47/85 (55.29%), Postives = 55/85 (64.71%), Query Frame = 0
Query:    1 MGSTDRDALNNLYEATGGAGWVTKTNWGSSAPLSQWHGVAVNDQGRVVKLVLDSNSLEGTRVIPESLTALSELEELRFINNKLTG 85
            M  TDRDAL  LY ATGG  W  + NW + A L  WHGV VNDQGRVVKL L  N+LEG   IP +L  L  L++L   +NKL+G
Sbjct:    1 MAQTDRDALVVLYRATGGENWRERQNWDTDADLKTWHGVDVNDQGRVVKLKLRDNNLEGE--IPATLGKLGNLQQLHLSSNKLSG 83          
BLAST of mRNA_E-fasciculatus_F_contig1065.516.1 vs. uniprot
Match: D8LL09_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL09_ECTSI)

HSP 1 Score: 85.1 bits (209), Expect = 5.440e-14
Identity = 42/76 (55.26%), Postives = 55/76 (72.37%), Query Frame = 0
Query:    1 MGSTDRDALNNLYEATGGAGWVTKTNWGSSAPLSQWHGVAVNDQGRVVKLVLDSNSLEGTRVIPESLTALSELEEL 76
            M  TDRDAL  LY+A GG  W    NW + A LS+WHG+ +NDQGRVV++ L +N+L+G+  IPE+L ALS+LE L
Sbjct:   51 MPQTDRDALVALYDAAGGFNWKNNGNWNADADLSKWHGININDQGRVVEVHLAANNLQGS--IPEALGALSKLERL 124          
BLAST of mRNA_E-fasciculatus_F_contig1065.516.1 vs. uniprot
Match: A0A6H5JK91_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK91_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 8.490e-14
Identity = 42/75 (56.00%), Postives = 48/75 (64.00%), Query Frame = 0
Query:    1 MGSTDRDALNNLYEATGGAGWVTKTNWGSSAPLSQWHGVAVNDQGRVVKLVLDSNSLEGTRVIPESLTALSELEE 75
            M  TDRDAL  LY ATGG  W    NW + A L  WHGV VNDQGRVVKL L  N+LEG   IP +L  L+ L++
Sbjct:    1 MAQTDRDALVALYRATGGENWRESQNWDTDADLKTWHGVDVNDQGRVVKLKLRDNNLEGE--IPATLGQLANLQQ 73          
BLAST of mRNA_E-fasciculatus_F_contig1065.516.1 vs. uniprot
Match: D7FHA3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHA3_ECTSI)

HSP 1 Score: 86.7 bits (213), Expect = 1.120e-13
Identity = 47/85 (55.29%), Postives = 57/85 (67.06%), Query Frame = 0
Query:    1 MGSTDRDALNNLYEATGGAGWVTKTNWGSSAPLSQWHGVAVNDQGRVVKLVLDSNSLEGTRVIPESLTALSELEELRFINNKLTG 85
            M S DR AL  L+ + GG  W    NW + A LSQW+GV V   GRVV+L L SN+LEGT  IPE+L  L+EL+ LRF +NKLTG
Sbjct:    1 MASEDRAALVALFRSAGGTRWHRNKNWDTGADLSQWYGVHVKHDGRVVELWLSSNNLEGT--IPEALGVLTELKYLRFNHNKLTG 83          
BLAST of mRNA_E-fasciculatus_F_contig1065.516.1 vs. uniprot
Match: D8LFK2_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFK2_ECTSI)

HSP 1 Score: 83.6 bits (205), Expect = 1.420e-13
Identity = 46/74 (62.16%), Postives = 49/74 (66.22%), Query Frame = 0
Query:    1 MGSTDRDALNNLYEATGGAGWVTKTNWGSSAPLSQWHGVAVNDQGRVVKLVLDSNSLEGTRVIPESLTALSELE 74
            M  TDR AL  LY ATGGA W    NW +SA LSQWHGV VN QGRVVKL L  N+L G   IP+ L ALS LE
Sbjct:   71 MAQTDRKALVALYNATGGAEWKNNQNWTTSAALSQWHGVEVNTQGRVVKLSLGWNNLRGP--IPKELGALSRLE 142          
BLAST of mRNA_E-fasciculatus_F_contig1065.516.1 vs. uniprot
Match: D7FH89_ECTSI (Putative Leucine Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH89_ECTSI)

HSP 1 Score: 86.3 bits (212), Expect = 1.750e-13
Identity = 45/85 (52.94%), Postives = 55/85 (64.71%), Query Frame = 0
Query:    1 MGSTDRDALNNLYEATGGAGWVTKTNWGSSAPLSQWHGVAVNDQGRVVKLVLDSNSLEGTRVIPESLTALSELEELRFINNKLTG 85
            M S DR AL  L+ +TGG  W+   NW + A LS+WHGV VN  GRVV+L L++N+L GT  IPE+L  L EL  L    NKLTG
Sbjct:   34 MSSEDRAALVALFRSTGGTRWILNANWATDADLSKWHGVEVNQHGRVVELDLNNNNLRGT--IPETLRGLKELMVLNLSCNKLTG 116          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1065.516.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K655_9PHAE6.570e-17776.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHD4_ECTSI1.090e-11656.58Putative leucine rich repeat protein n=1 Tax=Ectoc... [more]
A0A6H5KIZ7_9PHAE3.570e-8547.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JX36_9PHAE3.510e-1566.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LBY3_ECTSI9.820e-1555.29Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
D8LL09_ECTSI5.440e-1455.26Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5JK91_9PHAE8.490e-1456.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FHA3_ECTSI1.120e-1355.29Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
D8LFK2_ECTSI1.420e-1362.16Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
D7FH89_ECTSI1.750e-1352.94Putative Leucine Rich Repeat Protein n=1 Tax=Ectoc... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 166..190
e-value: 33.0
score: 9.0
coord: 70..94
e-value: 84.0
score: 5.7
coord: 214..238
e-value: 160.0
score: 3.4
coord: 118..142
e-value: 11.0
score: 13.0
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 2..159
e-value: 1.0E-39
score: 137.9
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 160..282
e-value: 9.1E-29
score: 102.1
NoneNo IPR availablePANTHERPTHR27008FAMILY NOT NAMEDcoord: 46..132
NoneNo IPR availablePANTHERPTHR27008:SF246coord: 103..209
NoneNo IPR availablePANTHERPTHR27008:SF246coord: 46..132
NoneNo IPR availablePANTHERPTHR27008FAMILY NOT NAMEDcoord: 129..271
NoneNo IPR availablePANTHERPTHR27008:SF246coord: 129..271
NoneNo IPR availablePANTHERPTHR27008FAMILY NOT NAMEDcoord: 103..209
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 5..266

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1065contigE-fasciculatus_F_contig1065:7893..16385 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1065.516.1mRNA_E-fasciculatus_F_contig1065.516.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1065 7352..16385 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1065.516.1 ID=prot_E-fasciculatus_F_contig1065.516.1|Name=mRNA_E-fasciculatus_F_contig1065.516.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=840bp
MGSTDRDALNNLYEATGGAGWVTKTNWGSSAPLSQWHGVAVNDQGRVVKL
VLDSNSLEGTRVIPESLTALSELEELRFINNKLTGPIPEALCALKELKVL
VLYKNQLNGCIPAELGDLSNLEHLSLCDNNLTGSIPRELGALSKLHTLQL
YRNMLTGSIPKELFSLSRLETLWVNRNKLTGPIPPDIGNATALVSVKLHR
NELSGHIPKELGALRKLEMLLLGYNRLVGFVPAQLVKLQSISSLELENNQ
LSGPVPCAIQLRVLQSALFSRGDELYEGDAIAAWSERFHLATVTGNAQSA
ECLKSVRSSIRTSVTSTMSTYSADMSTTSGTTSTLTKQEEAVASNMVKQL
KPPRIPGARATGHNPDEDSDAPINTRMAALKAAAAAVAAENLAAISAVAA
RSEEVDQRSHRFDTPVTENTESAECLKSVESSIRSSITSVQSTYSPDMST
TWGTTSTSTSSASTSTKQEEAVPSNTVKQLKPPRIPGARAIGERPNEDSD
APINTRMAAISGFEGEVVAWSFGDGPDVLRNHDLDFELEVPDLGRNVPAL
IGLCSSSAEVVDGKQCLLHPVVRCLARNGERFDPNLCLRLPVGDEASTES
GSDPESDDENADVAFRAYLESKFTVVTREDASSEWVPMDGTIKQAEGGVF
VLEVAVPHFCDFALSQDINVSPGCVEVVPLPKLMGKARRSHFHFVNQGEE
SLVAHCWGTVKKTGFWDSLRFNLGGGATSAHAEFEGHRQRVDTGNGAVYS
VEVPRRDPTNPENQVPRVFLGTESITVAWTTQRRQNARRRLAQVWGSSPM
QHKHAMVFGPLLDIDTCQVSNLPVDDGESLGKLVKSKVE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR003591Leu-rich_rpt_typical-subtyp