prot_E-fasciculatus_F_contig1065.515.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1065.515.1
Unique Nameprot_E-fasciculatus_F_contig1065.515.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length520
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1065.515.1 vs. uniprot
Match: A0A6H5K7G4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7G4_9PHAE)

HSP 1 Score: 652 bits (1681), Expect = 1.910e-230
Identity = 402/501 (80.24%), Postives = 425/501 (84.83%), Query Frame = 0 
Query:   20 VLRCLGPLSWLQCASVCSGWSDAILSPKPTTARASTALAVARESISGGASTAAA-AVLPAAAEQIATAPTSGTTSPAADTTETSTSDGGAEAVSGKGKGMAA-TAVVTADLWREFAVTVIRYNEPAAADCDTGGYVPNDSGSNDTNSCTYGFGHHHRFRHHTLTRNRNGRSKPLRALHPSSRCGAHSHFFRHVCLEGDPTVLGPPLRATIAASGGGTGRRETAIATVSLTDVSKAAEARFRRPRALVKFLWLWIRHSNTDHRQTTVPTIELTRNNLHFTYESPWDRRRGTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALLNEALGVFTKLFVLCRRCRRPCTTLYVSQDDANGIARNGTGGKESAG-AAAVIPEVRGRRVTLWVECQEDGCGWRSGMGIAAAAGGSTAPPPWLAKFARYVQSRAWKGINTLPEDHGTEWFSDTSPAAVQHRLNEARAKSVGLDALARRRSDEGDSDGLSDGSGASSSDEVN 517
            +LRCLGPLSWL CASVCSGWSDAILS KP TAR   ALAVA E  SGGASTA A  V+PA  ++ ATAPTSGTTSPAAD TE S SDGGAEAV+GK K  AA TAVV  DLWREFAVTVIRYN PA AD D GG     SG++ +N  T  FG +HR+ HH LTR+R  RSKPLRALHP SR GAH HFFRHVCLEGDPTVLGPPLRATIAASG GTGRRETAIATVSL DVSKAAEARFRRPRAL+KFLWLWIR+SNT+HR TTVPTIELT NN+ FTY+SP  RRRG GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LL+EALGVFTKLFVLC RCRRPCTTL+ +QDDA+ +A+N  GGKESAG  AAVIPEVRGRRVTLWVECQED CGWRSGM +AA      APPPWLAKFARYVQSRAWKGINTLPEDHGTEWFSDTSPAAVQ RLNEARA SVGLDALARR SD GDSDG SDGSGASSSDE N
Sbjct:    1 MLRCLGPLSWLHCASVCSGWSDAILSRKPKTARGPAALAVAGEPTSGGASTAPAIVVVPAGEQETATAPTSGTTSPAADRTEASISDGGAEAVNGKEKAAAAATAVVKTDLWREFAVTVIRYNGPAVADRDIGG-----SGTSGSNCPTCSFGQNHRY-HHNLTRDR--RSKPLRALHPPSRGGAHGHFFRHVCLEGDPTVLGPPLRATIAASGSGTGRRETAIATVSLADVSKAAEARFRRPRALIKFLWLWIRYSNTEHRLTTVPTIELTPNNIQFTYKSPCGRRRGIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-LLSEALGVFTKLFVLCHRCRRPCTTLFANQDDASNVAQNVAGGKESAGRTAAVIPEVRGRRVTLWVECQEDWCGWRSGMSVAAGXXXXXAPPPWLAKFARYVQSRAWKGINTLPEDHGTEWFSDTSPAAVQRRLNEARANSVGLDALARRGSDGGDSDGFSDGSGASSSDEAN 492
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BLAST of mRNA_E-fasciculatus_F_contig1065.515.1 vs. uniprot
Match: D7FLN6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLN6_ECTSI)

HSP 1 Score: 169 bits (429), Expect = 1.160e-47
Identity = 85/95 (89.47%), Postives = 87/95 (91.58%), Query Frame = 0 
Query:  423 MGIAAAAGGSTAPPPWLAKFARYVQSRAWKGINTLPEDHGTEWFSDTSPAAVQHRLNEARAKSVGLDALARRRSDEGDSDGLSDGSGASSSDEVN 517
            M +AA  GGSTAP PWLAKFARYVQSRAWKGINTLPEDHGTEWFSDTSPAAVQ RLNEARA SVGLDALARR SD GD+DGLSDGSGASSSDEVN
Sbjct:    1 MSVAAGGGGSTAPSPWLAKFARYVQSRAWKGINTLPEDHGTEWFSDTSPAAVQRRLNEARANSVGLDALARRESDGGDNDGLSDGSGASSSDEVN 95
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1065.515.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K7G4_9PHAE1.910e-23080.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FLN6_ECTSI1.160e-4789.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001810F-box domainPFAMPF00646F-boxcoord: 14..48
e-value: 6.9E-5
score: 22.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1065contigE-fasciculatus_F_contig1065:4625..7128 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1065.515.1mRNA_E-fasciculatus_F_contig1065.515.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1065 3069..7353 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1065.515.1 ID=prot_E-fasciculatus_F_contig1065.515.1|Name=mRNA_E-fasciculatus_F_contig1065.515.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=520bp
MNGFGAIERALQMPELLTSVLRCLGPLSWLQCASVCSGWSDAILSPKPTT
ARASTALAVARESISGGASTAAAAVLPAAAEQIATAPTSGTTSPAADTTE
TSTSDGGAEAVSGKGKGMAATAVVTADLWREFAVTVIRYNEPAAADCDTG
GYVPNDSGSNDTNSCTYGFGHHHRFRHHTLTRNRNGRSKPLRALHPSSRC
GAHSHFFRHVCLEGDPTVLGPPLRATIAASGGGTGRRETAIATVSLTDVS
KAAEARFRRPRALVKFLWLWIRHSNTDHRQTTVPTIELTRNNLHFTYESP
WDRRRGTGGGSAAKTVAGPGSSRSSSSRSKKKANSPQSCCVTTTALLNEA
LGVFTKLFVLCRRCRRPCTTLYVSQDDANGIARNGTGGKESAGAAAVIPE
VRGRRVTLWVECQEDGCGWRSGMGIAAAAGGSTAPPPWLAKFARYVQSRA
WKGINTLPEDHGTEWFSDTSPAAVQHRLNEARAKSVGLDALARRRSDEGD
SDGLSDGSGASSSDEVNNK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001810F-box_dom