mRNA_E-fasciculatus_F_contig10647.513.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig10647.513.1 vs. uniprot
Match: A0A6H5KZP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZP2_9PHAE) HSP 1 Score: 459 bits (1180), Expect = 1.350e-156 Identity = 225/313 (71.88%), Postives = 247/313 (78.91%), Query Frame = 1
Query: 7 VSVRTLAGKTINLVVGSHNTIDDVKQQIQDKEGIPPDEQRYIFGGRQLEDGRTMGDYNIQKGSTLHLVLRMSGGGGDQPRRASIAVSAKFADVSDSSGLTEHAFSDHEPDWRIAKPGLCLEGRCTNSDCDADGCMVILNHGFQDFDLMRQGRDPECCPMCHSKVVPSTCGFTDCTWRYKGRKAGETNVLVGMWKEAGDSYHRFKEDGEEVEWDRLLIQVRPLLKLEQRVLSAPPARKRVK-------------PSVVDHTWGRCTRCTDCSAFEETLASDETVLECGHRFHTKCLAGWERDSMIVCPICREES 906
+ V+TL GKT+ LVVGS+NTI D+KQ +QD EGIPPD+QR IF G QLEDG T+ YNIQ STLHLVLR+ GGG P IAV AKF DVSDSSGLTEHAFSDH P WR+A+PGLCLEGRCTNSDCDA G MVILNHG +DFDL+R GRDP+ CPMC+ +VVPSTC FTDCTWRYKGRKAGETNVLVGMWKEAGDSYHRF GE VEWDRLLIQ RPLLKLEQRV SAPPA +RV+ V+DHTWGRC SAF T ASDETVL+CGHRFHT+CL GWE+ SMIVCPICREES
Sbjct: 272 IFVKTLTGKTVKLVVGSYNTIADIKQMMQDMEGIPPDQQRLIFAGVQLEDGLTISFYNIQGNSTLHLVLRLRGGGFAAPP---IAVGAKFVDVSDSSGLTEHAFSDHAPRWRVAEPGLCLEGRCTNSDCDAHGRMVILNHGLRDFDLIRPGRDPKRCPMCNFEVVPSTCAFTDCTWRYKGRKAGETNVLVGMWKEAGDSYHRFDGRGE-VEWDRLLIQARPLLKLEQRVPSAPPADERVERPNTTAISATSTVADVIDHTWGRCXXXXXXSAFGATSASDETVLDCGHRFHTRCLTGWEQGSMIVCPICREES 580
BLAST of mRNA_E-fasciculatus_F_contig10647.513.1 vs. uniprot
Match: D7G3U0_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3U0_ECTSI) HSP 1 Score: 308 bits (788), Expect = 1.900e-102 Identity = 147/199 (73.87%), Postives = 162/199 (81.41%), Query Frame = 1
Query: 352 PGLCLEGRCTNSDCDADGCMVILNHGFQDFDLMRQGRDPECCPMCHSKVVPSTCGFTDCTWRYKGRKAGETNVLVGMWKEAGDSYHRFKEDGEEVEWDRLLIQVRPLLKLEQRVLSAPPARKRV-KPS------------VVDHTWGRCTRCTDCSAFEETLASDETVLECGHRFHTKCLAGWERDSMIVCPICREESS 909
P LCLEGRCTN CDA G MVILNH F+DFDL+R GRDP+ CPMC+ +VVPSTC FTDCTWRYKGRKAGETNVLVGMWKEAGDSYHRF+E GE V+WDRLLIQVRPLLKLEQRV SAPPA +R+ +P+ V+DHTW RCT SAF T ASDETVL+CGHRFHT+CLAGWE+ SMIVCPICREESS
Sbjct: 18 PRLCLEGRCTNRQCDAHGRMVILNHAFRDFDLIRPGRDPKRCPMCNREVVPSTCAFTDCTWRYKGRKAGETNVLVGMWKEAGDSYHRFEEGGE-VQWDRLLIQVRPLLKLEQRVPSAPPADERMERPNTTANTATSTVAVVIDHTWSRCTXXXXXSAFGATPASDETVLDCGHRFHTRCLAGWEQGSMIVCPICREESS 215
BLAST of mRNA_E-fasciculatus_F_contig10647.513.1 vs. uniprot
Match: A0A225VQY5_9STRA (Ubiquitin family protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VQY5_9STRA) HSP 1 Score: 248 bits (634), Expect = 5.410e-77 Identity = 133/305 (43.61%), Postives = 176/305 (57.70%), Query Frame = 1
Query: 7 VSVRTLAGKTINLVVGSHNTIDDVKQQIQDKEGIPPDEQRYIFGGRQLEDGRTMGDYNIQKGSTLHLVLRMSGGGGDQPRRASIAVSAKFADVSDSSGLTEHAFSDHEPDWRIAKPGLCLEGRCTNSDCDADGCMVILNHGFQDFDLMRQGRDPECCPMCHSKVVPSTCGFTDCTWRYKGRKAGETNVLVGMWKEA-GDSYHRFKEDGEE--VEWDRLLIQVRPLLKLEQRVLSAPPARKRVKPSVVDHTWGRCTRCTDCSAFEETLASDETVLECGHRFHTKCLAGWER-----DSMIVCPICR 897
+ ++TL GKT+ + S ++ID+VKQ+IQD++G PPD+QR IF G+ LEDGRT+GDY I GS++ VLR+ GGGG S FADVSD+S L EH FS + P WR GL +EGRC N C A G M+I + F F+LMR R CPMC V P TCGF DC W++ G ++ + + WK+A G+ YHRF D + VEWD LLI V+P + + A PA +V S D T C C + ET+A + C H FHT C+ W + DS+ CP+CR
Sbjct: 75 IYIKTLTGKTLKIHCTSTDSIDNVKQKIQDQDGTPPDQQRLIFAGKHLEDGRTLGDYGIFHGSSVCQVLRLRGGGGP-------LTSMYFADVSDNSILREHTFSTNAPQWRSCGKGLNIEGRCENRGCPAFGKMIIYPNRFNPFNLMRGDRAH--CPMCGDDVKPLTCGFYDCVWKFDGIRSSDGFSISSPWKDASGEKYHRFDADEKHGSVEWDSLLIMVKPRGEAASAKIIASPAIHQVNASTSDSEQESETICPICWSIAETVAGETITTHCEHTFHTSCIQEWAQWCSRHDSLPSCPVCR 370
BLAST of mRNA_E-fasciculatus_F_contig10647.513.1 vs. uniprot
Match: S4W648_9VIRU (Ubiquitin n=1 Tax=Pandoravirus salinus TaxID=1349410 RepID=S4W648_9VIRU) HSP 1 Score: 226 bits (577), Expect = 7.760e-66 Identity = 123/302 (40.73%), Postives = 166/302 (54.97%), Query Frame = 1
Query: 13 VRTLAGKTINLVVGSHNTIDDVKQQIQDKEGIPPDEQRYIFGGRQLEDGRTMGDYNIQKGSTLHLVLRMSGGGGDQPRRASIAVSAKFADVSDSSGLTEHAFSDHEPDWRIAKPGLCLEGRCTNSDCDADGCMVILNHGFQDFDLMRQGRDPECCPMCHSKVVPSTCGFTDCTWRYKGRKAGETNVLVGMWKEAGDSYHRFKED-GEEVEWDRLLIQVRPLLKLEQRVLSAPPARKRVKPSVVDHTWGRCTRCTDCSAFEETLASDETVLECGHRFHTKCLAGWERDSMIVCPICREESSSP 915
V+TL GK I + N+I+++K I DKEG+PPD+QR ++ G+Q+EDGR + DY I+ +++HLVLR+ GGGG P SA F D+ ++ + +S PDWRI KPGLC+EGRC N C A G MVI+N GF FDL+ D CP C V P TC F +C W++ G K G++ G W A D+YH F ED VEW RLLI+ R + K+ + + P KP D C + S + VL+CGH FH+ C+ W S CP CR + P
Sbjct: 346 VQTLTGKVITIEAAPANSIEEIKCIIHDKEGLPPDQQRLLYAGQQMEDGRRLADYAIRAEASMHLVLRLRGGGGGPP------ASATFVDMENTGAMQCRQWSKSAPDWRIVKPGLCIEGRCKNVGCAAYGRMVIVNKGFDTFDLLLDA-DTCACPECDKHVKPKTCAFNNCWWKWNGIKEGDSRKYAGKWTLADDNYHCFAEDEAGSVEWTRLLIRARSIPKVAKSGGNEPIG----KP--FDMFCCICISSINSSGVHK-------VLDCGHAFHSPCIDAWVARSP-TCPHCRHKVVEP 626
BLAST of mRNA_E-fasciculatus_F_contig10647.513.1 vs. uniprot
Match: A0A6A3IE52_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3IE52_9STRA) HSP 1 Score: 219 bits (558), Expect = 2.110e-65 Identity = 127/304 (41.78%), Postives = 168/304 (55.26%), Query Frame = 1
Query: 7 VSVRTLAGKTINLVVGSHNTIDDVKQQIQDKEGIPPDEQRYIFGGRQLEDGRTMGDYNIQKGSTLHLVLRMSGGGGDQPRRASIAVSAKFADVSDSSGLTEHAFSDHEPDWRIAKPGLCLEGRCTNSDCDADGCMVILNHGFQDFDLMRQGRDPECCPMCHSKVVPSTCGFTDCTWRYKGRKAGETNVLVGMWK-EAGDSYHRFKED--GEEVEWDRLLIQVRPLLKLEQRVLSAPPARKRVKPSVVDHTWGRCTRCTDCSAFEETLASDETVLECGHRFHTKCLAGWERDS-----MIVCPIC 894
+ ++TL GKT ++ + NTI+++K IQ++EGIPPD+QR IF G+QLEDGR + DYNIQ GSTLHLVLR+ GG +PR FADVSD S EH FS P+WRI + GL +EGRC N C A +VI GF+ F+L + G CP C SKV P TCGF DC W+++G KA W+ +G+ Y RF D +EW+ LLI V+PL + L R+ +V C C + E L+ ECGH FH C+ W + S + CP+C
Sbjct: 104 IYIKTLTGKTTHVNCHAANTIEEIKYDIQEQEGIPPDQQRIIFAGKQLEDGRKLSDYNIQYGSTLHLVLRLRGGY-VEPRC--------FADVSDGSISVEHEFSRTAPEWRICRKGLNIEGRCMNRTCIAYHELVIHPAGFEMFNLRKDG--DVTCPKCRSKVKPVTCGFYDCAWKFEGVKARGGFFTSSPWQIVSGEKYQRFDADETSGSIEWESLLILVKPLKEAVAAELVESAQEARLHSDLV---------CAVC--WTEILSGSGAGSECGHLFHCGCIENWSKWSEGQKTLTKCPVC 385
BLAST of mRNA_E-fasciculatus_F_contig10647.513.1 vs. uniprot
Match: A0A6A3GVD8_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3GVD8_9STRA) HSP 1 Score: 218 bits (555), Expect = 1.060e-64 Identity = 120/309 (38.83%), Postives = 170/309 (55.02%), Query Frame = 1
Query: 7 VSVRTLAGKTINLVVGSHNTIDDVKQQIQDKEGIPPDEQRYIFGGRQLEDGRTMGDYNIQKGSTLHLVLRMSGGGGDQPRRASIAVSAKFADVSDSSGLTEHAFSDHEPDWRIAKPGLCLEGRCTNSDCDADGCMVILNHGFQDFDLMRQGRDPECCPMCHSKVVPSTCGFTDCTWRYKGRKAGETNVLVGMWKEAGDS-YHRFKEDGEE--VEWDRLLIQVRPLLKLEQRVLSAPPARKRV---KPSVVDHTWGRCTRCTDCSAFEETLASDETVLECGHRFHTKCLAGWER-----DSMIVCPICRE 900
+++++L GK ++ID+VK +IQDK GIPPD+QR I G QL+DGR + DY I+ GS L + LR+ GGGG +P R F DVSD+S LTE + S+ PDWR+ GL +EG C N +C+A G MVI +GF F+LM RD EC P C+ P TCGF C W+++G ++ + + W+ AG+S YHRF D VEW+ LLI V+ + E + P + + K +V W R F T + +CGH FH +C+ W D++ CP+CR+
Sbjct: 120 LTIKSLTGKIAIFCAMPSDSIDNVKLRIQDKWGIPPDQQRLICAGVQLQDGRALSDYKIKTGSELLVFLRLRGGGGPRPPRK------VFVDVSDNSNLTEQSLSNEAPDWRVCDEGLNIEGECENRECEAFGQMVIYQYGFDSFNLMGD-RDVEC-PKCYETFTPITCGFYKCVWKFEGVRSSDGYFISSPWQNAGESKYHRFDSDENSGSVEWNSLLIVVKS--RRESTAVKIPATTRSMIVRKDNVCSICWSR---------FGSTAKRTMSTAKCGHTFHRECINKWSEWCSSHDALPSCPLCRQ 409
BLAST of mRNA_E-fasciculatus_F_contig10647.513.1 vs. uniprot
Match: A0A5J4VNX4_9EUKA (Putative ring and ubiquitin domain containing protein n=1 Tax=Streblomastix strix TaxID=222440 RepID=A0A5J4VNX4_9EUKA) HSP 1 Score: 204 bits (519), Expect = 1.230e-57 Identity = 118/305 (38.69%), Postives = 166/305 (54.43%), Query Frame = 1
Query: 1 MDVSVRTLAGKTINLVVGSHNTIDDVKQQIQDKEGIPPDEQRYIFGGRQLEDGRTMGDYNIQKGSTLHLVLRMSGGGGDQPRRASIAVSAKFADVSDSSGLTEHAFSDHEPDWRIAKPGLCLEGRCTNSDCDADGC-MVILNHGFQDFDLMRQGRDPECCPMCHSKVVPSTCGFTDCTWRYKGRKAGETNVLVGM--WKEAGDSYHRFKE-DGEEVEWDRLLIQVRPLLKLEQRVLSAPPARKRVKPSVVDHTWGRCTRCTDCSAFEETLASDETVLECGHRFHTKCLAGWERDSMIVCPICREE 903
M + ++TL GKTI L V + NTI+++K IQDKEGIPP++QR IF G+QLEDG + DY I K +TLHLVLR+ GGG + F DV S L + +S P WR G+ +EGRC NS C A MVI N GF DFDL+R CPMC+S++ GF +C WR RK TN ++ WK+AGD Y + E ++ RL++ + L ++ + + K +K + + G C C + E + V++C H FH C+ W +DS + CP C+E+
Sbjct: 308 MKIFIKTLTGKTIALQVQNDNTIEEIKSLIQDKEGIPPEQQRLIFAGKQLEDGYLLADYKILKEATLHLVLRLRGGG----------EAMNFVDVERSDALIQRQWSKTAPQWRCVSRGMAIEGRCDNSSCQAHNRGMVIFNVGFSDFDLLRNESH---CPMCYSRIKGIKPGFNNCIWRIDFRK---TNGIISRLKWKKAGDEYTTYDEAQAGTADFTRLIMHAKQLSDTREQTIVSEG--KEMKTTFI--VGGSCGLCHEDKNDERD--KNVIVMKCSHNFHKVCIKIW-KDSGLKCPHCKED 589
BLAST of mRNA_E-fasciculatus_F_contig10647.513.1 vs. uniprot
Match: A0A815UV84_9BILA (Hypothetical protein n=6 Tax=Rotaria magnacalcarata TaxID=392030 RepID=A0A815UV84_9BILA) HSP 1 Score: 190 bits (482), Expect = 4.100e-56 Identity = 100/226 (44.25%), Postives = 133/226 (58.85%), Query Frame = 1
Query: 1 MDVSVRTLAGKTINLVVGSHNTIDDVKQQIQDKEGIPPDEQRYIFGGRQLEDGRTMGDYNIQKGSTLHLVLRMSGGGGDQPRRASIAVSAKFADVSDSSGLTEHAFSDHEPDWRIAKPGLCLEGRCTNSDCDADGCMVILNHGFQDFDLMRQGRDPEC-CPMCHSKVVPSTCGFTDCTWRYKGRKAGETN----VLVGMWKEAGDSYHRFKED-GEEVEWDRLLIQ 660
M V ++T KT+ + +TI+++K +IQ KEGIPPD+QR IFGG+QLEDGRT+ DYNIQK TLH+V+R+ GG + F D+S+ SGL +S P WR A PGLCLEG+CTN +C A VI+N F+ FD++ C CP+C V P+TCGF C W +KG K G G W EA ++YH F E V W +L+I+
Sbjct: 1 MQVFIKTHTCKTLTIECECSDTIENLKYKIQGKEGIPPDQQRIIFGGKQLEDGRTLADYNIQKEFTLHMVIRLRGGD----------MGVDFVDLSNGSGLKRLNWSTSAPKWRKAGPGLCLEGQCTNRNCKAYSQAVIMNIRFKKFDMLLDVNQTTCQCPICKEYVKPNTCGFNRCWWCWKGIKEGGAGEPPKACSGNWTEADNAYHYFDEKISGSVTWRQLIIE 216
BLAST of mRNA_E-fasciculatus_F_contig10647.513.1 vs. uniprot
Match: A0A835ZBQ4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBQ4_9STRA) HSP 1 Score: 193 bits (491), Expect = 2.670e-55 Identity = 121/309 (39.16%), Postives = 159/309 (51.46%), Query Frame = 1
Query: 1 MDVSVRTLAGKTINLV-VGSHNTIDDVKQQIQDKEGIPPDEQRYIFGGRQLEDGRTMGDYNIQKGSTLHLVLRMSGGGGDQPRRASIAVSAKFADVSDSSGLTEHAFSDHEPDWRIAKPGLCLEGRCTNSDCDADGCMVILNHGFQDFDLMRQGRDPEC-CPMCHSKVVPSTCGFTDCTWRYKGRKAGETNVLVGMWKEAGDS-YHRFKEDGEEVEWDRLLIQVRPLLKLEQRVLSAPPARKRVKPSVVDHTWGRCT--RCTDC-SAFEETLASDE-TVLECGHRFHTKCLAGWER---DSMIVCPICR 897
M + V+TL G L V S +TID +K+ IQD EGI PD+QR IF GRQLEDGR++ DY+IQK TLHLVLR+ GGG +FADV++ + + SD P WR + G+ +EG C N C+A +VI G F L C CP+C+S + P TCGF C W Y G K G ++ G W+ AGD Y RF+E W RL++ +P +K++ + P + S D GR C C F S + T CG+R+H CLA W S CP CR
Sbjct: 107 MKLFVKTLTGACFELDDVLSGDTIDALKEMIQDLEGILPDQQRIIFAGRQLEDGRSVADYSIQKEHTLHLVLRLRGGGCGPS-------GLQFADVTNDGAMERRSVSDDAPVWRTVRRGINMEGYCRNLRCEARVTLVIAPVGMAAFPL-----GSLCPCPVCYSAITPVTCGFYACAWTYDGAKEGG-ELVRGAWRTAGDDKYDRFRESDNMTTWSRLVLVAKPAVKVKPK-----PRATAAESSGADKAAGRLQPDECAVCLRGFGSGDGSSKATSTPCGYRYHALCLASWRECSHASCSKCPTCR 397
BLAST of mRNA_E-fasciculatus_F_contig10647.513.1 vs. uniprot
Match: A0A835ZEG5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEG5_9STRA) HSP 1 Score: 192 bits (489), Expect = 1.530e-54 Identity = 115/305 (37.70%), Postives = 160/305 (52.46%), Query Frame = 1
Query: 7 VSVRTLAGKTINLV-VGSHNTIDDVKQQIQDKEGIPPDEQRYIFGGRQLEDGRTMGDYNIQKGSTLHLVLRMSGGGGDQPRRASIAVSAKFADVSDSSGLTEHAFSDHEPDWRIAKPGLCLEGRCTNSDCDADGCMVILNHGFQDFDLMRQGRDPECCPMCHSKVVPSTCGFTDCTWRYKGRKAGETNVLVGMWKEAGDS-YHRFKEDGEEVEWDRLLIQVRPLLKLEQRVLSAPPARKRVKPSVVDHTWGRCTRCTDCSAFEETLASDE---TVLECGHRFHTKCLAGWER---DSMIVCPICR 897
+ V+TL G+++ L V +T+D +K +I D EGIP D+QR IF G+QLED RT+ DY++++ STLHLVLR+ GGG S +FADVS+ + +FS P WR + GL +EG C ++ C A G +VI G F L + CPMC S + P TCGF C W Y G K + ++ G W+ AGD Y RF+E W RL++ +P +K++ S P A V +V + + +C+ T CGHR+H CLAGW S CP CR
Sbjct: 156 IYVKTLRGQSLPLSGVLPCDTVDILKDRISDCEGIPADQQRLIFAGKQLEDSRTVDDYSMERDSTLHLVLRLRGGGCGPS-------SLQFADVSNDGAIERRSFSQDAPRWRTVRRGLNMEGYCRDARCKARGALVIAPIGMAAFPLGSRCT----CPMCGSAITPVTCGFNACAWTYDGAKE-DGELVRGAWRTAGDDKYERFRESDNMATWSRLVLVAKPAVKVK----SDPGAA--VADAVDNKEAAGASEPDECAVGLRGFGGRSGAVTTTRCGHRYHALCLAGWRECSHASCSKCPTCR 442 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10647.513.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig10647.513.1 >prot_E-fasciculatus_F_contig10647.513.1 ID=prot_E-fasciculatus_F_contig10647.513.1|Name=mRNA_E-fasciculatus_F_contig10647.513.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=308bp MDVSVRTLAGKTINLVVGSHNTIDDVKQQIQDKEGIPPDEQRYIFGGRQLback to top mRNA from alignment at E-fasciculatus_F_contig10647:189..1151+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig10647.513.1 ID=mRNA_E-fasciculatus_F_contig10647.513.1|Name=mRNA_E-fasciculatus_F_contig10647.513.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=963bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10647:189..1151+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig10647:189..1151+ >mRNA_E-fasciculatus_F_contig10647.513.1 ID=mRNA_E-fasciculatus_F_contig10647.513.1|Name=mRNA_E-fasciculatus_F_contig10647.513.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1848bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10647:189..1151+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |