prot_E_fasciculatus_S2_contig9922.17917.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E_fasciculatus_S2_contig9922.17917.1
Unique Name	prot_E_fasciculatus_S2_contig9922.17917.1
Type	polypeptide
Organism	Ectocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length	300

Homology

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BLAST of mRNA_E_fasciculatus_S2_contig9922.17917.1 vs. uniprot
Match: D8LJP4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJP4_ECTSI)

HSP 1 Score: 227 bits (579), Expect = 3.160e-69
Identity = 195/320 (60.94%), Postives = 209/320 (65.31%), Query Frame = 0

Query:    1 ARCSPRADRVGGQKKRRGAGAGTLASTV------SAPASAKPPTTPPPVRRLQQPRKPAFAGFSA-----TTAGPTVRPSILSSPSMRRVGGVGGASGSSAAGASAPRSTVGPAXXXXXXT---AVMPPAAPSLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------AAVPSGHLFGASVXXXXXXXXXXXXXXXXXXXXTALFQTQQLARDDMDVDPSKTERMATAKVMMANALASVAQVKLSLAGT-AMSKAEEEARVLQSVIADADLARALAAVEELREAEWVANQMDVDEDGD-EGPWPMEVD 298
            ARCSPRADRVGGQKKRRGAGAGT ASTV        PAS KPP  PPPVRR    RK AF GF A     TTAGP VR SILSSPSM RVG             +A RSTVGPA  XXXX    AVMPPAAPS Q XXXXXXXXXXXXX                XXXXXXXXX      +  P G LFGA+                     ++ FQTQQLARDDMDVDPSK ER++TA  +MA ALASV Q KLSLAG  +MSKAEEEA + QSVIADADLARA AA+EELREAEW +NQMDVD+D + EGPWPMEVD
Sbjct:   41 ARCSPRADRVGGQKKRRGAGAGTPASTVVGPTTMPVPASTKPPIAPPPVRRPLHARKSAFIGFPAHPSPVTTAGPAVRLSILSSPSMPRVGXXXXXXXXXXXXTAASRSTVGPAAVXXXXXXXXAVMPPAAPSFQAXXXXXXXXXXXXXQPSQGSMAAARYAAAVXXXXXXXXXXXXXMSSPAPPGQLFGAA------------------SSWSSAFQTQQLARDDMDVDPSKLERISTATAVMARALASVLQAKLSLAGRPSMSKAEEEALLWQSVIADADLARAQAAMEELREAEWASNQMDVDDDEEYEGPWPMEVD 342

[Close]

BLAST of mRNA_E_fasciculatus_S2_contig9922.17917.1 vs. uniprot
Match: A0A6H5JUB7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUB7_9PHAE)

HSP 1 Score: 122 bits (305), Expect = 1.240e-30
Identity = 70/107 (65.42%), Postives = 84/107 (78.50%), Query Frame = 0

Query:  194 TALFQTQQLARDDMDVDPSKTERMATAKVMMANALASVAQVKLSLAGTA-MSKAEEEARVLQSVIADADLARALAAVEELREAEWVANQMDVDEDGD-EGPWPMEVD 298
            +++FQTQ LARDDMDVDPSK ERM  A  M+ +ALASV Q KLSLA    ++K EE A +LQSVI DADLA A AA++ELR AEW +NQM+VD+D + EGPWPMEVD
Sbjct:   48 SSVFQTQHLARDDMDVDPSKRERMCRATAMIPSALASVVQAKLSLASRPFLTKVEEAALLLQSVIGDADLASAQAAMKELRAAEWASNQMEVDDDEEYEGPWPMEVD 154

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig9922.17917.1 vs. uniprot

BLAST of mRNA_E_fasciculatus_S2_contig9922.17917.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LJP4_ECTSI	3.160e-69	60.94	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JUB7_9PHAE	1.240e-30	65.42	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 35..299
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..17
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..34
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 30..34
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 18..29

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E_fasciculatus_S2_contig9922	contig	E_fasciculatus_S2_contig9922:1860..3441 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-07-07

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E_fasciculatus_S2_contig9922.17917.1	mRNA_E_fasciculatus_S2_contig9922.17917.1	Ectocarpus fasciculatus EfasUO2	mRNA	E_fasciculatus_S2_contig9922 1860..3441 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E_fasciculatus_S2_contig9922.17917.1 ID=prot_E_fasciculatus_S2_contig9922.17917.1|Name=mRNA_E_fasciculatus_S2_contig9922.17917.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=300bp
ARCSPRADRVGGQKKRRGAGAGTLASTVSAPASAKPPTTPPPVRRLQQPR
KPAFAGFSATTAGPTVRPSILSSPSMRRVGGVGGASGSSAAGASAPRSTV
GPAAAAAGATAVMPPAAPSLQAAAAVMPPAAPSLQAATAVMPAAAPSLQA
AAAVMPAVMPAAVPSGHLFGASVAVAAVVMPPPQPPGQLFGAATALFQTQ
QLARDDMDVDPSKTERMATAKVMMANALASVAQVKLSLAGTAMSKAEEEA
RVLQSVIADADLARALAAVEELREAEWVANQMDVDEDGDEGPWPMEVDV*