prot_E_fasciculatus_S2_contig9766.17762.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E_fasciculatus_S2_contig9766.17762.1
Unique Name	prot_E_fasciculatus_S2_contig9766.17762.1
Type	polypeptide
Organism	Ectocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length	176

Homology

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BLAST of mRNA_E_fasciculatus_S2_contig9766.17762.1 vs. uniprot
Match: A0A6H5JFX0_9PHAE (DRIM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFX0_9PHAE)

HSP 1 Score: 301 bits (771), Expect = 1.610e-91
Identity = 163/177 (92.09%), Postives = 168/177 (94.92%), Query Frame = 0

Query:    1 MEWLKACPSSISTLRAVALLLRAIRAA-GGDGAPPPCLSADASLPVISLLEPNLASESRLLRLSTVRVLARYDPLPLTEEPSAGXXXXXXLPRQSQGESSLLELAEAVEALPVSVAAERDLMWRLGQLEVLGRSGRLPRPYARLLATHALGLLRVKFSAVWPRAVAIVSALYRQSHQ 176
            MEWL+ACPSSISTLRAVALLLRAIRAA GGDGAPPPCLSADASLP+ISLLEPNLASESRL+RLSTVRVLARYDPLPLTEEP+A       LPRQSQGESS LELAEAVEALPVSVAAERDLMWRLGQLEVLGRSGRLPRPYARLLATHALGLLRVKFSAVWPRAVAIVSALYR+SHQ
Sbjct:  880 MEWLRACPSSISTLRAVALLLRAIRAAAGGDGAPPPCLSADASLPIISLLEPNLASESRLIRLSTVRVLARYDPLPLTEEPAAAGGG---LPRQSQGESSFLELAEAVEALPVSVAAERDLMWRLGQLEVLGRSGRLPRPYARLLATHALGLLRVKFSAVWPRAVAIVSALYRRSHQ 1053

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BLAST of mRNA_E_fasciculatus_S2_contig9766.17762.1 vs. uniprot
Match: D8LFJ6_ECTSI (DRIM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFJ6_ECTSI)

HSP 1 Score: 297 bits (761), Expect = 3.570e-90
Identity = 162/177 (91.53%), Postives = 166/177 (93.79%), Query Frame = 0

Query:    1 MEWLKACPSSISTLRAVALLLRAIRAA-GGDGAPPPCLSADASLPVISLLEPNLASESRLLRLSTVRVLARYDPLPLTEEPSAGXXXXXXLPRQSQGESSLLELAEAVEALPVSVAAERDLMWRLGQLEVLGRSGRLPRPYARLLATHALGLLRVKFSAVWPRAVAIVSALYRQSHQ 176
            MEWL ACPSSISTLRAVALLLRAIRAA GGDG PPPCLSADASLPVI+LLEPNLAS+SRLLRLSTVRVLARYDPLPLTEEP+A       LPRQSQGESSLLELAEAVE LPVSVAAERDLMWRLGQLEVLGRSGRLPRPYARLLATHALGLLRVKFSAVWPRAVAIVSALYR+SHQ
Sbjct:  831 MEWLSACPSSISTLRAVALLLRAIRAAAGGDGTPPPCLSADASLPVIALLEPNLASDSRLLRLSTVRVLARYDPLPLTEEPAAAGGVG--LPRQSQGESSLLELAEAVEELPVSVAAERDLMWRLGQLEVLGRSGRLPRPYARLLATHALGLLRVKFSAVWPRAVAIVSALYRRSHQ 1005

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig9766.17762.1 vs. uniprot

BLAST of mRNA_E_fasciculatus_S2_contig9766.17762.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5JFX0_9PHAE	1.610e-91	92.09	DRIM domain-containing protein n=1 Tax=Ectocarpus ...	[more]
D8LFJ6_ECTSI	3.570e-90	91.53	DRIM domain-containing protein n=1 Tax=Ectocarpus ...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR17695	UNCHARACTERIZED	coord: 39..172
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 22..26
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 27..176
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..9
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 10..21
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..26
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..26 score: 0.546

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E_fasciculatus_S2_contig9766	contig	E_fasciculatus_S2_contig9766:4247..4774 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-07-07

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E_fasciculatus_S2_contig9766.17762.1	mRNA_E_fasciculatus_S2_contig9766.17762.1	Ectocarpus fasciculatus EfasUO2	mRNA	E_fasciculatus_S2_contig9766 4247..4774 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E_fasciculatus_S2_contig9766.17762.1 ID=prot_E_fasciculatus_S2_contig9766.17762.1|Name=mRNA_E_fasciculatus_S2_contig9766.17762.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=176bp
MEWLKACPSSISTLRAVALLLRAIRAAGGDGAPPPCLSADASLPVISLLE
PNLASESRLLRLSTVRVLARYDPLPLTEEPSAGGGGGGGLPRQSQGESSL
LELAEAVEALPVSVAAERDLMWRLGQLEVLGRSGRLPRPYARLLATHALG
LLRVKFSAVWPRAVAIVSALYRQSHQ