prot_E_fasciculatus_S2_contig9644.17654.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig9644.17654.1
Unique Nameprot_E_fasciculatus_S2_contig9644.17654.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length98
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9644.17654.1 vs. uniprot
Match: D8LEF3_ECTSI (Putative hUPF2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEF3_ECTSI)

HSP 1 Score: 179 bits (453), Expect = 4.110e-50
Identity = 93/95 (97.89%), Postives = 93/95 (97.89%), Query Frame = 0
Query:    4 RRELREKHTPEALKVSRDAHEANKPKLKSDLKKTTAFTKKVKVLSEDQRSALTKDVETLNLNRYVSEVVDAVAENRLKNADVSVAVHLCCLMHQR 98
            RRELREKHTPEALK SRDAHEANKPKLKSDLKKTTAFTKKVK LSEDQRSALTKDVETLNLNRYVSEVVDAVAENRLKNADVSVAVHLCCLMHQR
Sbjct:  428 RRELREKHTPEALKASRDAHEANKPKLKSDLKKTTAFTKKVKALSEDQRSALTKDVETLNLNRYVSEVVDAVAENRLKNADVSVAVHLCCLMHQR 522          
BLAST of mRNA_E_fasciculatus_S2_contig9644.17654.1 vs. uniprot
Match: A0A835YRH9_9STRA (Armadillo-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRH9_9STRA)

HSP 1 Score: 129 bits (325), Expect = 7.430e-33
Identity = 65/98 (66.33%), Postives = 80/98 (81.63%), Query Frame = 0
Query:    1 DARRRELREKHTPEALKVSRDAHEANKPKLKSDLKKTTAFTKKVKVLSEDQRSALTKDVETLNLNRYVSEVVDAVAENRLKNADVSVAVHLCCLMHQR 98
            D  RR LR ++TP A+  SR +H ANK KLKSDLKKT+ FT KV+ L+E QR+ +TKD+ETLNL+ YVSE+VDAVAE +LK +DVSVAVHLCC+MHQR
Sbjct:   11 DEERRALRARNTPGAVAASRASHNANKSKLKSDLKKTSTFTSKVRTLTEAQRATITKDIETLNLSHYVSEIVDAVAEAKLKTSDVSVAVHLCCMMHQR 108          
BLAST of mRNA_E_fasciculatus_S2_contig9644.17654.1 vs. uniprot
Match: A0A3R7M352_PENVA (Regulator of nonsense transcripts 2 n=1 Tax=Penaeus vannamei TaxID=6689 RepID=A0A3R7M352_PENVA)

HSP 1 Score: 87.4 bits (215), Expect = 1.070e-19
Identity = 48/93 (51.61%), Postives = 62/93 (66.67%), Query Frame = 0
Query:    6 ELREKHTPEALKVSRDAHEANKPKLKSDLKKTTAFTKKVKVLSEDQRSALTKDVETLNLNRYVSEVVDAVAENRLKNADVSVAVHLCCLMHQR 98
            E +E   PE +K   D  E N   L S LKK TAF +K+K L+E Q  +L KD+++LNL +YVSEV  AV E +LK +D+S AVHLC L+HQR
Sbjct:   39 EKKENDDPEIVK---DRPELNTALLDSSLKKNTAFIRKLKNLTESQHDSLVKDLQSLNLTKYVSEVAQAVVETKLKMSDISTAVHLCSLLHQR 128          
BLAST of mRNA_E_fasciculatus_S2_contig9644.17654.1 vs. uniprot
Match: A0A4D9D616_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D616_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 2.360e-19
Identity = 50/96 (52.08%), Postives = 68/96 (70.83%), Query Frame = 0
Query:    4 RRELREKHTPEALKVSRDAHEANKPKLKSDLKKTTAFTKKVKV-LSEDQRSALTKDVETLNLNRYVSEVVDAVAENRLKNADVSVAVHLCCLMHQR 98
            R +LR  + P A + SR AHEA   +LKSDLK+TTAF K+V+  L E+QR AL +D+  LNL+ +VSE+V AVA+ +LK ADV  A+ +C  +HQR
Sbjct:  149 RAKLRLLNAPSAARASRAAHEAGLRQLKSDLKRTTAFIKRVRTGLGEEQREALLRDISGLNLSMFVSELVQAVADAKLKGADVPAAIQVCSALHQR 244          
BLAST of mRNA_E_fasciculatus_S2_contig9644.17654.1 vs. uniprot
Match: A0A8J5NAL5_HOMAM (Regulator of nonsense transcripts 2-like n=1 Tax=Homarus americanus TaxID=6706 RepID=A0A8J5NAL5_HOMAM)

HSP 1 Score: 87.8 bits (216), Expect = 3.840e-18
Identity = 49/97 (50.52%), Postives = 67/97 (69.07%), Query Frame = 0
Query:    2 ARRRELREKHTPEALKVSRDAHEANKPKLKSDLKKTTAFTKKVKVLSEDQRSALTKDVETLNLNRYVSEVVDAVAENRLKNADVSVAVHLCCLMHQR 98
            AR+ ELR ++    L V++D  E N   L S LKK TAF KK+K L+E Q  +L +D+++LNL +YVSEV  AV E +LK +D++ AVHLC L+HQR
Sbjct:  104 ARKAELRVQN----LAVAKDRPELNTAMLDSSLKKNTAFIKKLKNLTESQHDSLIRDLQSLNLTKYVSEVAQAVVEAKLKMSDITTAVHLCSLLHQR 196          
BLAST of mRNA_E_fasciculatus_S2_contig9644.17654.1 vs. uniprot
Match: UPI001C45EDC1 (regulator of nonsense transcripts 2-like isoform X1 n=5 Tax=Astacidea TaxID=6712 RepID=UPI001C45EDC1)

HSP 1 Score: 87.8 bits (216), Expect = 3.880e-18
Identity = 49/97 (50.52%), Postives = 67/97 (69.07%), Query Frame = 0
Query:    2 ARRRELREKHTPEALKVSRDAHEANKPKLKSDLKKTTAFTKKVKVLSEDQRSALTKDVETLNLNRYVSEVVDAVAENRLKNADVSVAVHLCCLMHQR 98
            AR+ ELR ++    L V++D  E N   L S LKK TAF KK+K L+E Q  +L +D+++LNL +YVSEV  AV E +LK +D++ AVHLC L+HQR
Sbjct:  130 ARKAELRVQN----LAVAKDRPELNTAMLDSSLKKNTAFIKKLKNLTESQHDSLIRDLQSLNLTKYVSEVAQAVVEAKLKMSDITTAVHLCSLLHQR 222          
BLAST of mRNA_E_fasciculatus_S2_contig9644.17654.1 vs. uniprot
Match: A0A7S2WVG7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WVG7_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 4.010e-18
Identity = 52/103 (50.49%), Postives = 66/103 (64.08%), Query Frame = 0
Query:    1 DARRRELREKHTPEALKVSRDAHEANKPKLKSDLKKTTAFTKKVKV-LSEDQRSALTKDVETLNLNRYVSEVVDAV----AENRLKNADVSVAVHLCCLMHQR 98
            D  R+ LRE   PEAL+  R  H ANK KLKSDL+K TAFTKKVK  + E   + L KD+ETLNL+ Y+SE+V A+    A  RLK +D+   V +C  +H R
Sbjct:   32 DQERQRLREASLPEALEAFRAQHAANKSKLKSDLRKATAFTKKVKAGVVERDVTGLLKDIETLNLSMYISEIVAAIVSPEALQRLKTSDIHSVVRICVALHLR 134          
BLAST of mRNA_E_fasciculatus_S2_contig9644.17654.1 vs. uniprot
Match: UPI001C716FA3 (regulator of nonsense transcripts 2-like n=1 Tax=Penaeus japonicus TaxID=27405 RepID=UPI001C716FA3)

HSP 1 Score: 86.7 bits (213), Expect = 9.680e-18
Identity = 44/83 (53.01%), Postives = 58/83 (69.88%), Query Frame = 0
Query:   16 LKVSRDAHEANKPKLKSDLKKTTAFTKKVKVLSEDQRSALTKDVETLNLNRYVSEVVDAVAENRLKNADVSVAVHLCCLMHQR 98
            + V +D  E N   L S LKK TAF KK+K L+E Q  +L KD+++LNL +YVSEV  AV E +LK +D++ AVHLC L+HQR
Sbjct:  130 IAVVKDRPELNTALLDSSLKKNTAFIKKLKNLTESQHDSLVKDLQSLNLTKYVSEVAQAVVETKLKMSDIATAVHLCSLLHQR 212          
BLAST of mRNA_E_fasciculatus_S2_contig9644.17654.1 vs. uniprot
Match: UPI001C710D49 (regulator of nonsense transcripts 2-like n=5 Tax=Penaeus TaxID=133894 RepID=UPI001C710D49)

HSP 1 Score: 86.7 bits (213), Expect = 9.870e-18
Identity = 44/83 (53.01%), Postives = 58/83 (69.88%), Query Frame = 0
Query:   16 LKVSRDAHEANKPKLKSDLKKTTAFTKKVKVLSEDQRSALTKDVETLNLNRYVSEVVDAVAENRLKNADVSVAVHLCCLMHQR 98
            + V +D  E N   L S LKK TAF KK+K L+E Q  +L KD+++LNL +YVSEV  AV E +LK +D++ AVHLC L+HQR
Sbjct:  130 IAVVKDRPELNTALLDSSLKKNTAFIKKLKNLTESQHDSLVKDLQSLNLTKYVSEVAQAVVETKLKMSDIATAVHLCSLLHQR 212          
BLAST of mRNA_E_fasciculatus_S2_contig9644.17654.1 vs. uniprot
Match: A0A0P4WH54_SCYOL (Uncharacterized protein n=3 Tax=Portunidae TaxID=6757 RepID=A0A0P4WH54_SCYOL)

HSP 1 Score: 85.9 bits (211), Expect = 1.840e-17
Identity = 43/83 (51.81%), Postives = 59/83 (71.08%), Query Frame = 0
Query:   16 LKVSRDAHEANKPKLKSDLKKTTAFTKKVKVLSEDQRSALTKDVETLNLNRYVSEVVDAVAENRLKNADVSVAVHLCCLMHQR 98
            L V++D  E N   L S LKK TAF KK+K L+E Q  +L +D+++LNL +YVSEV  AV E +LK +D++ AVH+C L+HQR
Sbjct:  128 LAVAKDRPELNTALLDSSLKKNTAFIKKLKNLTESQHESLVRDLQSLNLTKYVSEVAQAVVEAKLKMSDINTAVHICSLLHQR 210          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9644.17654.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEF3_ECTSI4.110e-5097.89Putative hUPF2 n=2 Tax=Ectocarpus TaxID=2879 RepID... [more]
A0A835YRH9_9STRA7.430e-3366.33Armadillo-type protein n=1 Tax=Tribonema minus Tax... [more]
A0A3R7M352_PENVA1.070e-1951.61Regulator of nonsense transcripts 2 n=1 Tax=Penaeu... [more]
A0A4D9D616_9STRA2.360e-1952.08Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A8J5NAL5_HOMAM3.840e-1850.52Regulator of nonsense transcripts 2-like n=1 Tax=H... [more]
UPI001C45EDC13.880e-1850.52regulator of nonsense transcripts 2-like isoform X... [more]
A0A7S2WVG7_9STRA4.010e-1850.49Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
UPI001C716FA39.680e-1853.01regulator of nonsense transcripts 2-like n=1 Tax=P... [more]
UPI001C710D499.870e-1853.01regulator of nonsense transcripts 2-like n=5 Tax=P... [more]
A0A0P4WH54_SCYOL1.840e-1751.81Uncharacterized protein n=3 Tax=Portunidae TaxID=6... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016021MIF4G-like domain superfamilyGENE3D1.25.40.180coord: 1..98
e-value: 2.3E-30
score: 107.9
IPR039762Nonsense-mediated mRNA decay protein Nmd2/UPF2PANTHERPTHR12839NONSENSE-MEDIATED MRNA DECAY PROTEIN 2 UP-FRAMESHIFT SUPPRESSOR 2coord: 5..98

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig9644contigE_fasciculatus_S2_contig9644:201..494 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig9644.17654.1mRNA_E_fasciculatus_S2_contig9644.17654.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig9644 201..494 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig9644.17654.1 ID=prot_E_fasciculatus_S2_contig9644.17654.1|Name=mRNA_E_fasciculatus_S2_contig9644.17654.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=98bp
DARRRELREKHTPEALKVSRDAHEANKPKLKSDLKKTTAFTKKVKVLSED
QRSALTKDVETLNLNRYVSEVVDAVAENRLKNADVSVAVHLCCLMHQR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039762Nmd2/UPF2
IPR016021MIF4-like_sf