prot_E_fasciculatus_S2_contig9570.17586.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig9570.17586.1
Unique Nameprot_E_fasciculatus_S2_contig9570.17586.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length80
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig9570.17586.1 vs. uniprot
Match: D7FLU6_ECTSI (PAP_fibrillin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLU6_ECTSI)

HSP 1 Score: 114 bits (285), Expect = 2.850e-29
Identity = 67/80 (83.75%), Postives = 69/80 (86.25%), Query Frame = 0 
Query:    1 MKVQACLAALAATASMCGAFVPALVSCRDGVRAPHAHHRPSSASPLRSSSS-PADAVDAFPSDVSPDLDDASSSSYTPPA 79
            MK+QACLAALAAT + CGAFVPALVSCRDGVRA HAHHRPSSASPLRSSSS PADAVDAFPSDVSPD      SS TPPA
Sbjct:    1 MKLQACLAALAATVNTCGAFVPALVSCRDGVRASHAHHRPSSASPLRSSSSSPADAVDAFPSDVSPDA-----SSSTPPA 75
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9570.17586.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FLU6_ECTSI2.850e-2983.75PAP_fibrillin domain-containing protein n=2 Tax=Ec... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..80
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..15
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..27
score: 5.0
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.616

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig9570contigE_fasciculatus_S2_contig9570:3097..4607 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig9570.17586.1mRNA_E_fasciculatus_S2_contig9570.17586.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig9570 3083..4607 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig9570.17586.1 ID=prot_E_fasciculatus_S2_contig9570.17586.1|Name=mRNA_E_fasciculatus_S2_contig9570.17586.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=80bp
MKVQACLAALAATASMCGAFVPALVSCRDGVRAPHAHHRPSSASPLRSSS
SPADAVDAFPSDVSPDLDDASSSSYTPPAG
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