prot_E_fasciculatus_S2_contig9371.17422.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig9371.17422.1
Unique Nameprot_E_fasciculatus_S2_contig9371.17422.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length111
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9371.17422.1 vs. uniprot
Match: D7FZ76_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ76_ECTSI)

HSP 1 Score: 182 bits (461), Expect = 3.360e-57
Identity = 104/108 (96.30%), Postives = 107/108 (99.07%), Query Frame = 0
Query:    3 DTTFDFEKRRNRPVKYDREAMGKTLLAMKKVKEVQAKREKRFFENRHKGALAKEKASIKADIKDNIELLAPAAAVDREKTITAISDKAKQQKASAAASKARALMETED 110
            DTTFDFEKRRNRPVKYDREAMGKTLLAMKKVKEVQAKREKRFFENRHKGALAKEKA+IKA+IKDNIELLAPAAAVDREKT+TAISDKAKQ KASAAASKARALMETED
Sbjct:   29 DTTFDFEKRRNRPVKYDREAMGKTLLAMKKVKEVQAKREKRFFENRHKGALAKEKAAIKAEIKDNIELLAPAAAVDREKTLTAISDKAKQ-KASAAASKARALMETED 135          
BLAST of mRNA_E_fasciculatus_S2_contig9371.17422.1 vs. uniprot
Match: A0A6H5KA78_9PHAE (TRASH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA78_9PHAE)

HSP 1 Score: 180 bits (457), Expect = 4.600e-56
Identity = 103/108 (95.37%), Postives = 106/108 (98.15%), Query Frame = 0
Query:    3 DTTFDFEKRRNRPVKYDREAMGKTLLAMKKVKEVQAKREKRFFENRHKGALAKEKASIKADIKDNIELLAPAAAVDREKTITAISDKAKQQKASAAASKARALMETED 110
            DTTFDFEKRRNRPVKYDREAMGKTLLAMKKVKEVQAKREKRFFENRHKGALAKEKA+IKA+IKDNIELLAPAAAVDREKT+TAISDKAKQ KASAAASKAR LMETED
Sbjct:   67 DTTFDFEKRRNRPVKYDREAMGKTLLAMKKVKEVQAKREKRFFENRHKGALAKEKAAIKAEIKDNIELLAPAAAVDREKTLTAISDKAKQ-KASAAASKARTLMETED 173          
BLAST of mRNA_E_fasciculatus_S2_contig9371.17422.1 vs. uniprot
Match: A0A835Z8F8_9STRA (RL30, ribosomal protein 30 60S large ribosomal subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8F8_9STRA)

HSP 1 Score: 115 bits (289), Expect = 1.800e-30
Identity = 65/102 (63.73%), Postives = 83/102 (81.37%), Query Frame = 0
Query:    3 DTTFDFEKRRNRPVKYDREAMGKTLLAMKKVKEVQAKREKRFFENRHKGALAKEKASIKADIKDNIELLAPAAAVDREKTITAISDKAKQQKASAAASKARA 104
            DTTFDFEKRRNRPVKYDRE MGKTLLAMKKV EVQA+REKRFF+ RHK   A+EKA+I+ +++ NIELL PAAA DREK +  + +  +Q+++  A ++A+A
Sbjct:   67 DTTFDFEKRRNRPVKYDRELMGKTLLAMKKVTEVQAQREKRFFDVRHKDKAAREKAAIRTEVEQNIELLVPAAA-DREKALANVKEVIRQKESKNALTRAKA 167          
BLAST of mRNA_E_fasciculatus_S2_contig9371.17422.1 vs. uniprot
Match: A0A4D9CSX3_9STRA (TRASH domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CSX3_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 1.600e-21
Identity = 48/89 (53.93%), Postives = 71/89 (79.78%), Query Frame = 0
Query:    3 DTTFDFEKRRNRPVKYDREAMGKTLLAMKKVKEVQAKREKRFFENRHKGALAKEKASIKADIKDNIELLAPAAAVDREKTITAISDKAK 91
            D TFDFEKRRNRPVKYDR+ +GKT+ AM+K++ +Q++RE+ F++ R + A  KEKA+++ ++K+N+ELLAPAAA  REK +  + +K K
Sbjct:   66 DATFDFEKRRNRPVKYDRDLVGKTVQAMQKIRTIQSRREEVFYQTRMREAKMKEKAALQVEVKENVELLAPAAA-SREKVLLNVREKVK 153          
BLAST of mRNA_E_fasciculatus_S2_contig9371.17422.1 vs. uniprot
Match: A0A448YUA5_9STRA (TRASH domain-containing protein n=2 Tax=Pseudo-nitzschia TaxID=41953 RepID=A0A448YUA5_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 2.390e-21
Identity = 50/91 (54.95%), Postives = 72/91 (79.12%), Query Frame = 0
Query:    3 DTTFDFEKRRNRPVKYDREAMGKTLLAMKKVKEVQAKREKRFFENRHKGALAKEKASIKADIKDNIELLAPAAAVDREKTITAISDKAKQQ 93
            D+TFDFEKRRNRPVKYDR+ MGKT+LAM++V+ ++  RE+RFF+NR K + A++K   + +I+ +IELLAPA A +RE+ +  + D AKQ+
Sbjct:   66 DSTFDFEKRRNRPVKYDRDLMGKTILAMRRVESIKKAREQRFFDNRVKDSKAEKKQQARVEIEKSIELLAPAVA-NREQVMRNVIDSAKQR 155          
BLAST of mRNA_E_fasciculatus_S2_contig9371.17422.1 vs. uniprot
Match: W7T7Z2_9STRA (Ribosome biogenesis protein rlp24 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T7Z2_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 2.780e-21
Identity = 48/91 (52.75%), Postives = 73/91 (80.22%), Query Frame = 0
Query:    3 DTTFDFEKRRNRPVKYDREAMGKTLLAMKKVKEVQAKREKRFFENRHKGALAKEKASIKADIKDNIELLAPAAAVDREKTITAISDKAKQQ 93
            D TFDFEKRRNRPVKYDR+ +GKT+ AM+K++ +Q++RE+ F++ R + A  KEKA+++ ++K+N+ELLAPAAA  REK +  + +K K++
Sbjct:  142 DATFDFEKRRNRPVKYDRDLVGKTVQAMQKIRTIQSRREEVFYQTRMREAKMKEKAALQVEVKENVELLAPAAA-SREKALLNVREKVKER 231          
BLAST of mRNA_E_fasciculatus_S2_contig9371.17422.1 vs. uniprot
Match: A0A6U3SB39_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3SB39_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 2.830e-21
Identity = 52/94 (55.32%), Postives = 73/94 (77.66%), Query Frame = 0
Query:    3 DTTFDFEKRRNRPVKYDREAMGKTLLAMKKVKEVQAKREKRFFENRHKGALAKEKASIKADIKDNIELLAPAAAVDREKTITAISDKAKQQKAS 96
            D+TF+FEKRRNRPVKYDR  MGKT+LAM++V+ ++ KRE+RFF NR K A  ++KA  + +I+  IELLAPA A +RE+ +  + DKA+++ AS
Sbjct:   66 DSTFEFEKRRNRPVKYDRNLMGKTILAMQRVQAIKEKREERFFANRMKDAKKEQKAQARVEIEKGIELLAPAVA-NREEVMRNVVDKARERIAS 158          
BLAST of mRNA_E_fasciculatus_S2_contig9371.17422.1 vs. uniprot
Match: A0A1E7FH63_9STRA (60S ribosomal protein L24 n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FH63_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 5.920e-21
Identity = 51/89 (57.30%), Postives = 69/89 (77.53%), Query Frame = 0
Query:    3 DTTFDFEKRRNRPVKYDREAMGKTLLAMKKVKEVQAKREKRFFENRHKGALAKEKASIKADIKDNIELLAPAAAVDREKTITAISDKAK 91
            D+TFDFEKRRNRPVKYDR+ MGKT+LAMK+V+ ++  RE+RFFENR   A A++K   + +I+ +IELLAPA A +RE+ +  + D AK
Sbjct:   66 DSTFDFEKRRNRPVKYDRDLMGKTILAMKRVETIKKAREERFFENRMSDAKAEKKKQARVEIEKSIELLAPAVA-NREQVMRNVIDSAK 153          
BLAST of mRNA_E_fasciculatus_S2_contig9371.17422.1 vs. uniprot
Match: A0A7S0PX55_9STRA (Hypothetical protein n=1 Tax=Asterionellopsis glacialis TaxID=33640 RepID=A0A7S0PX55_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 2.400e-19
Identity = 48/89 (53.93%), Postives = 68/89 (76.40%), Query Frame = 0
Query:    3 DTTFDFEKRRNRPVKYDREAMGKTLLAMKKVKEVQAKREKRFFENRHKGALAKEKASIKADIKDNIELLAPAAAVDREKTITAISDKAK 91
            D+TF+FEKRRNRPVKYDR+ MGKT+LAM++V+ ++  RE+RFF NR K A A++K   + +I+ +IELLAPA A  RE+ +  + D A+
Sbjct:   66 DSTFEFEKRRNRPVKYDRDLMGKTILAMQRVQNIKENREERFFANRMKDAKAEKKQQARVEIEKSIELLAPAVA-SREQVMKNVVDSAR 153          
BLAST of mRNA_E_fasciculatus_S2_contig9371.17422.1 vs. uniprot
Match: A0A7S3DS96_9STRA (Hypothetical protein n=2 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DS96_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 4.670e-19
Identity = 50/89 (56.18%), Postives = 65/89 (73.03%), Query Frame = 0
Query:    3 DTTFDFEKRRNRPVKYDREAMGKTLLAMKKVKEVQAKREKRFFENRHKGALAKEKASIKADIKDNIELLAPAAAVDREKTITAISDKAK 91
            D TF+FEKRRNRPVKY+RE MGKTL AMKKVK++Q  RE RFF+ R K A  ++K   + +I+ +IELLAPA A  RE+ +  + D A+
Sbjct:   66 DATFEFEKRRNRPVKYNRELMGKTLQAMKKVKDIQNAREDRFFQARMKDAAVEKKQQARVEIEKSIELLAPAVA-SREQVMRNVVDSAR 153          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9371.17422.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZ76_ECTSI3.360e-5796.30Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KA78_9PHAE4.600e-5695.37TRASH domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A835Z8F8_9STRA1.800e-3063.73RL30, ribosomal protein 30 60S large ribosomal sub... [more]
A0A4D9CSX3_9STRA1.600e-2153.93TRASH domain-containing protein n=2 Tax=Monodopsid... [more]
A0A448YUA5_9STRA2.390e-2154.95TRASH domain-containing protein n=2 Tax=Pseudo-nit... [more]
W7T7Z2_9STRA2.780e-2152.75Ribosome biogenesis protein rlp24 n=1 Tax=Nannochl... [more]
A0A6U3SB39_9STRA2.830e-2155.32Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A1E7FH63_9STRA5.920e-2157.3060S ribosomal protein L24 n=1 Tax=Fragilariopsis c... [more]
A0A7S0PX55_9STRA2.400e-1953.93Hypothetical protein n=1 Tax=Asterionellopsis glac... [more]
A0A7S3DS96_9STRA4.670e-1956.18Hypothetical protein n=2 Tax=Amphiprora paludosa T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR10792:SF8RIBOSOME BIOGENESIS PROTEIN RLP24-RELATEDcoord: 2..89
IPR000988Ribosomal protein L24e-relatedPANTHERPTHR1079260S RIBOSOMAL PROTEIN L24coord: 2..89

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig9371contigE_fasciculatus_S2_contig9371:1404..2899 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig9371.17422.1mRNA_E_fasciculatus_S2_contig9371.17422.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig9371 1404..2899 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig9371.17422.1 ID=prot_E_fasciculatus_S2_contig9371.17422.1|Name=mRNA_E_fasciculatus_S2_contig9371.17422.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=111bp
NQDTTFDFEKRRNRPVKYDREAMGKTLLAMKKVKEVQAKREKRFFENRHK
GALAKEKASIKADIKDNIELLAPAAAVDREKTITAISDKAKQQKASAAAS
KARALMETED*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000988Ribosomal_L24e-rel