prot_E_fasciculatus_S2_contig9003.17102.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig9003.17102.1
Unique Nameprot_E_fasciculatus_S2_contig9003.17102.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length92
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig9003.17102.1 vs. uniprot
Match: A0A6H5K6W2_9PHAE (Arginyl-tRNA synthetase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6W2_9PHAE)

HSP 1 Score: 117 bits (292), Expect = 1.080e-28
Identity = 66/78 (84.62%), Postives = 70/78 (89.74%), Query Frame = 0 
Query:   15 MRTRRGSLLAYRRESVVVPLAALALLGSTSPTMTATAFLPTSLIGSSTRAMLLPRWYNGAASVSAATRVASRRAAHST 92
            MRTR GS LAYRRE  VVPLAALALLGSTSPTMT TAFLPTSL+GSSTR+M+LPRW+NGAASVSA  R ASRRAAHST
Sbjct:    1 MRTRPGSFLAYRREFFVVPLAALALLGSTSPTMTVTAFLPTSLMGSSTRSMILPRWHNGAASVSATARFASRRAAHST 78
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9003.17102.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K6W2_9PHAE1.080e-2884.62Arginyl-tRNA synthetase n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..28
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 49..92
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 29..40
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 41..48
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..48

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig9003contigE_fasciculatus_S2_contig9003:2484..3750 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig9003.17102.1mRNA_E_fasciculatus_S2_contig9003.17102.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig9003 2484..3750 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig9003.17102.1 ID=prot_E_fasciculatus_S2_contig9003.17102.1|Name=mRNA_E_fasciculatus_S2_contig9003.17102.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=92bp
MSTGCLLCSPCKRSMRTRRGSLLAYRRESVVVPLAALALLGSTSPTMTAT
AFLPTSLIGSSTRAMLLPRWYNGAASVSAATRVASRRAAHST
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