prot_E_fasciculatus_S2_contig8924.17024.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig8924.17024.1
Unique Nameprot_E_fasciculatus_S2_contig8924.17024.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length409
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig8924.17024.1 vs. uniprot
Match: D8LIC9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIC9_ECTSI)

HSP 1 Score: 627 bits (1617), Expect = 7.440e-211
Identity = 363/409 (88.75%), Postives = 374/409 (91.44%), Query Frame = 0 
Query:    1 QYGKKKSLGGYATEEEAAKAYDRAALQLFGPSAVTNFKDGKRVQLEGRSQRSGGXXXXXGS-CKAKPSPGARPLDAAKQPVERPREQQYSGDTGSGQEESSTPAKPPVSSPESTPDRVETPAEAGAAASAEDANGGASAPESENVDIGGNTPSGPPLEVGAADYADEEEMDVVTPAAVA--VPSPQKVVPSSTSESLSEPGVPPGYVSVFQGHSAPVVAAAAAYAHPGFAAPAPAGSADNVMWPGPAPAGHPGFNPYGAASVGNAYGLQYGGAPAGYRQAQHSPTGIASGLAAXXXXXXXXXXXXEHNQALMNGKGPPAAYSAPAPGYGMYGAHPVFFHGQQPGSSDGASGFALSASSAMPGMPQQPATHQDQKSANPPPKVPSPLTVAAPSSGGAAGQGYSQAALVNM 406
            Q GKKKSLGGYATEEEAAKAYDRAALQLFGP AVTNFKDGKRVQLEGRSQRSGGXXXXX   CK KPSP ARP+DAAK+PVERPRE+Q SGD  S QE  STPAKPPV+SPE+TPD +ETP EA AAASAE+ANGGASAPESENVDIGG+TPS P LEVGAAD+ADEEEMDVVTPAA A  VPS +KVVPSS  ESLSEPGVPPGYVSVFQGHSAPVVAAAAAYAHPGFA PAPAGSAD VMWPGPAPAGHPGFNPYGAASVGNAYGLQYGGAPAGYRQAQHSPTGIASGLAAXXXXXXXXXXXXEHNQALMNGKGPPAAYSA APGYGMYGAHPVFFHGQQPGSSDGASGFALSA SAMPGMPQQ    QD KS NPPPK PSPLTVAAPSSGGAAGQGYSQAALVN+
Sbjct:  859 QDGKKKSLGGYATEEEAAKAYDRAALQLFGPGAVTNFKDGKRVQLEGRSQRSGGXXXXXXXXCKPKPSPAARPVDAAKEPVERPREEQDSGDAVSSQEACSTPAKPPVASPENTPDSLETPKEAVAAASAEEANGGASAPESENVDIGGSTPSDPLLEVGAADHADEEEMDVVTPAAAAAAVPSSEKVVPSSAPESLSEPGVPPGYVSVFQGHSAPVVAAAAAYAHPGFAPPAPAGSADTVMWPGPAPAGHPGFNPYGAASVGNAYGLQYGGAPAGYRQAQHSPTGIASGLAAXXXXXXXXXXXXEHNQALMNGKGPPAAYSAAAPGYGMYGAHPVFFHGQQPGSSDGASGFALSAPSAMPGMPQQQGAQQDHKSVNPPPKAPSPLTVAAPSSGGAAGQGYSQAALVNI 1267
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8924.17024.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LIC9_ECTSI7.440e-21188.75Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 1..44
e-value: 7.2E-4
score: 19.3
IPR001471AP2/ERF domainPROSITEPS51032AP2_ERFcoord: 1..38
score: 10.81
IPR036955AP2/ERF domain superfamilyGENE3D3.30.730.10coord: 1..39
e-value: 5.1E-10
score: 41.0
NoneNo IPR availablePANTHERPTHR31194:SF77ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF2coord: 8..157
NoneNo IPR availablePANTHERPTHR31194SHN SHINE , DNA BINDING / TRANSCRIPTION FACTORcoord: 8..157
IPR016177DNA-binding domain superfamilySUPERFAMILY54171DNA-binding domaincoord: 3..38

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8924contigE_fasciculatus_S2_contig8924:12..1238 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8924.17024.1mRNA_E_fasciculatus_S2_contig8924.17024.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig8924 12..1240 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig8924.17024.1 ID=prot_E_fasciculatus_S2_contig8924.17024.1|Name=mRNA_E_fasciculatus_S2_contig8924.17024.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=409bp
QYGKKKSLGGYATEEEAAKAYDRAALQLFGPSAVTNFKDGKRVQLEGRSQ
RSGGGGGSGGSCKAKPSPGARPLDAAKQPVERPREQQYSGDTGSGQEESS
TPAKPPVSSPESTPDRVETPAEAGAAASAEDANGGASAPESENVDIGGNT
PSGPPLEVGAADYADEEEMDVVTPAAVAVPSPQKVVPSSTSESLSEPGVP
PGYVSVFQGHSAPVVAAAAAYAHPGFAAPAPAGSADNVMWPGPAPAGHPG
FNPYGAASVGNAYGLQYGGAPAGYRQAQHSPTGIASGLAAAAAAAAAAAA
AAEHNQALMNGKGPPAAYSAPAPGYGMYGAHPVFFHGQQPGSSDGASGFA
LSASSAMPGMPQQPATHQDQKSANPPPKVPSPLTVAAPSSGGAAGQGYSQ
AALVNMHAQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016177DNA-bd_dom_sf
IPR036955AP2/ERF_dom_sf
IPR001471AP2/ERF_dom