prot_E_fasciculatus_S2_contig888.16982.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E_fasciculatus_S2_contig888.16982.1
Unique Name	prot_E_fasciculatus_S2_contig888.16982.1
Type	polypeptide
Organism	Ectocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length	247

Homology

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BLAST of mRNA_E_fasciculatus_S2_contig888.16982.1 vs. uniprot
Match: D7FR36_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR36_ECTSI)

HSP 1 Score: 222 bits (566), Expect = 3.840e-71
Identity = 102/111 (91.89%), Postives = 105/111 (94.59%), Query Frame = 0

Query:  104 DGSTEYLIDLNRQSDGSLRAAGICGVFRDWDEADRAELEEGCDDYDPCNGECGEFQVCSRSYFSYSAASYFCSDTCDPSPCSEGEECTLTYPPCSESDVCGPVATCGEEEG 214
            DGSTEYLIDLNRQSDGSLRAAGICGVFR+WDEADR ELEEGCDDYDPCNGECGEFQVCSRSYFSYS ASYFCSDTCDPSPCSEGEECTLTYP CS S+VCGPVA CGE +G
Sbjct:    4 DGSTEYLIDLNRQSDGSLRAAGICGVFREWDEADRVELEEGCDDYDPCNGECGEFQVCSRSYFSYSDASYFCSDTCDPSPCSEGEECTLTYPVCSASEVCGPVADCGEGDG 114

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BLAST of mRNA_E_fasciculatus_S2_contig888.16982.1 vs. uniprot
Match: A0A6H5L054_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L054_9PHAE)

HSP 1 Score: 221 bits (564), Expect = 1.270e-70
Identity = 106/113 (93.81%), Postives = 109/113 (96.46%), Query Frame = 0

Query:   49 VDGEDINSDDTYTLETIEVFKAEEPGPNEYDEVGSQFEITTAGNSGLCGVYMETTDGSTEYLIDLNRQSDGSLRAAGICGVFRDWDEADRAELEEGCDDYDPCNGECGEFQVC 161
            VDGEDINSDD YTLETIEVFKAE+PGPNEYDE GSQFEITTAGNSGLCGVYM+  DGSTEYLIDLNRQSDGSLRAAGICGVFR+WDEADRAELEEGCDDYDPCNGECGEFQVC
Sbjct:   10 VDGEDINSDDIYTLETIEVFKAEDPGPNEYDEAGSQFEITTAGNSGLCGVYMDA-DGSTEYLIDLNRQSDGSLRAAGICGVFREWDEADRAELEEGCDDYDPCNGECGEFQVC 121

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BLAST of mRNA_E_fasciculatus_S2_contig888.16982.1 vs. uniprot
Match: D7G2B7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2B7_ECTSI)

HSP 1 Score: 62.8 bits (151), Expect = 1.070e-7
Identity = 29/73 (39.73%), Postives = 40/73 (54.79%), Query Frame = 0

Query:  151 CNGECGEFQVCSRSYFSYSAASYFCSDTCDPSPCSEGEECTLTYPPCSESDVCGPVATCGEEEGGETPAPSST 223
            C G C EFQ C     +++   Y+CS  CDPSPC +GEECTL    C+   +CG  + C       +P P++T
Sbjct:  273 CEGRCSEFQECLFYSGNFAEDQYYCSAVCDPSPCGDGEECTLVPASCAPGSICGKRSIC-------SPLPAAT 338

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig888.16982.1 vs. uniprot

BLAST of mRNA_E_fasciculatus_S2_contig888.16982.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
D7FR36_ECTSI	3.840e-71	91.89	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5L054_9PHAE	1.270e-70	93.81	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7G2B7_ECTSI	1.070e-7	39.73	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.40.50.120		coord: 22..151 e-value: 2.1E-7 score: 33.0
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 6..16
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..5
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 22..247
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..21
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 17..21
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..21 score: 0.763
IPR008993	Tissue inhibitor of metalloproteinases-like, OB-fold	SUPERFAMILY	50242	TIMP-like	coord: 22..161

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E_fasciculatus_S2_contig888	contig	E_fasciculatus_S2_contig888:18749..26064 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-07-07

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E_fasciculatus_S2_contig888.16982.1	mRNA_E_fasciculatus_S2_contig888.16982.1	Ectocarpus fasciculatus EfasUO2	mRNA	E_fasciculatus_S2_contig888 18749..26064 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E_fasciculatus_S2_contig888.16982.1 ID=prot_E_fasciculatus_S2_contig888.16982.1|Name=mRNA_E_fasciculatus_S2_contig888.16982.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=247bp
MSLKYLAAAAVALCWSSRASACSCVAIGALCDSIQNTDVVLHVSAVSWVD
GEDINSDDTYTLETIEVFKAEEPGPNEYDEVGSQFEITTAGNSGLCGVYM
ETTDGSTEYLIDLNRQSDGSLRAAGICGVFRDWDEADRAELEEGCDDYDP
CNGECGEFQVCSRSYFSYSAASYFCSDTCDPSPCSEGEECTLTYPPCSES
DVCGPVATCGEEEGGETPAPSSTPGPETAPPIASDEEEEVTLPPTNE

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR008993	TIMP-like_OB-fold