prot_E_fasciculatus_S2_contig884.16939.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E_fasciculatus_S2_contig884.16939.1
Unique Name	prot_E_fasciculatus_S2_contig884.16939.1
Type	polypeptide
Organism	Ectocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length	340

Homology

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BLAST of mRNA_E_fasciculatus_S2_contig884.16939.1 vs. uniprot
Match: A0A6H5L8S0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8S0_9PHAE)

HSP 1 Score: 343 bits (881), Expect = 4.390e-114
Identity = 278/301 (92.36%), Postives = 282/301 (93.69%), Query Frame = 0

Query:    1 MSAHFDGGAEIAGRRLREVEVSYVDDPTLDMGAEDSDDCPASPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS-LDRGARKKKRAKDKGRKKAWLWRYVNVEKKKLLVWDRRGGRLLRSISLKDIESLLVIPDEDAPASILEVYISSPSTSSAASNGTVAGDGSGDSPVEGAGDEGDEEAQRAXXXXXXXXXXXXXXXXXXLVLQARSRRETLLWAKVLQENVELMTKRQVPLENRDEETSLSDVQQLAKLLTHQLSELQDSGINN 300
            MSAHFDGGAEIAGRRLREVEVSYVDDPTLDMGAEDSDDCPASPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      XXXXXXXXXXXXXXXXXXXXXXXXXX  LDRGARKKKRAKDKG KKAW WRYVNVEKKKLLVWDRRGGRLLRSISL+DIESLLVIPDE APASILEVYISSPS S  ASNGTV GDGS +SP+EGAGDEG+EEAQ  XXXXXXXXXXXXXXXXX LVLQARSRRETLLWAKVLQENVELMTKRQVPLENRDEETSLSDVQQLAKLLTHQLSELQDSGINN
Sbjct:    1 MSAHFDGGAEIAGRRLREVEVSYVDDPTLDMGAEDSDDCPASPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGRAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDRGARKKKRAKDKGGKKAWAWRYVNVEKKKLLVWDRRGGRLLRSISLRDIESLLVIPDEGAPASILEVYISSPSNSGGASNGTVTGDGSENSPIEGAGDEGEEEAQXXXXXXXXXXXXXXXXXXXVLVLQARSRRETLLWAKVLQENVELMTKRQVPLENRDEETSLSDVQQLAKLLTHQLSELQDSGINN 301

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BLAST of mRNA_E_fasciculatus_S2_contig884.16939.1 vs. uniprot
Match: D8LLT7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLT7_ECTSI)

HSP 1 Score: 91.3 bits (225), Expect = 3.050e-19
Identity = 43/43 (100.00%), Postives = 43/43 (100.00%), Query Frame = 0

Query:    1 MSAHFDGGAEIAGRRLREVEVSYVDDPTLDMGAEDSDDCPASP 43
            MSAHFDGGAEIAGRRLREVEVSYVDDPTLDMGAEDSDDCPASP
Sbjct:    1 MSAHFDGGAEIAGRRLREVEVSYVDDPTLDMGAEDSDDCPASP 43

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig884.16939.1 vs. uniprot

BLAST of mRNA_E_fasciculatus_S2_contig884.16939.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5L8S0_9PHAE	4.390e-114	92.36	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LLT7_ECTSI	3.050e-19	100.00	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 276..296

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E_fasciculatus_S2_contig884	contig	E_fasciculatus_S2_contig884:18151..21265 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-07-07

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E_fasciculatus_S2_contig884.16939.1	mRNA_E_fasciculatus_S2_contig884.16939.1	Ectocarpus fasciculatus EfasUO2	mRNA	E_fasciculatus_S2_contig884 17135..21265 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E_fasciculatus_S2_contig884.16939.1 ID=prot_E_fasciculatus_S2_contig884.16939.1|Name=mRNA_E_fasciculatus_S2_contig884.16939.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=340bp
MSAHFDGGAEIAGRRLREVEVSYVDDPTLDMGAEDSDDCPASPPPTYYLR
VREENKRRATGGGNGGGRDDDDAESNGGRAEQETGEGGGKSDDDADNDAN
DDTNNNNSLDRGARKKKRAKDKGRKKAWLWRYVNVEKKKLLVWDRRGGRL
LRSISLKDIESLLVIPDEDAPASILEVYISSPSTSSAASNGTVAGDGSGD
SPVEGAGDEGDEEAQRARRRRQQESGEGEGAGGGVLVLQARSRRETLLWA
KVLQENVELMTKRQVPLENRDEETSLSDVQQLAKLLTHQLSELQDSGINN
NNNNNNTAAAKRPSIAWACSEQTPPSPKAQSTAPRLRAS*