prot_E_fasciculatus_S2_contig8777.16873.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E_fasciculatus_S2_contig8777.16873.1
Unique Name	prot_E_fasciculatus_S2_contig8777.16873.1
Type	polypeptide
Organism	Ectocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length	341

Homology

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BLAST of mRNA_E_fasciculatus_S2_contig8777.16873.1 vs. uniprot
Match: A0A6H5JXD5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXD5_9PHAE)

HSP 1 Score: 599 bits (1544), Expect = 7.340e-215
Identity = 307/352 (87.22%), Postives = 321/352 (91.19%), Query Frame = 0

Query:    1 MMRPPLARRAAAGYVLSCGRRRRAPPS-PSSFTGQTP-----------TRGWSSSGFAAPGGDAGAAEMPGLPSAFPWRDAPDNRGVRGLAERAMHSVMQHQHRRFLRAATKLDDADDDAFLRAAEMAFVQVAAGVFQMPAHQVIAPLANGGGGEGKASSASGDRGIRRDGLPVWDIPEGAVVDPRDVMHKDLAEFYLQAAVAAKVSRSTPFYRLHGFSSCEISNVNVLWGAQRGDLPEEGETIEIWGSKYALKSLLQDIKAISSYRLSKDRAVLDKPLSSIRKTTVQVDVDIGCTETFFVSDDRTEEVVQGSKAVAVRKHRLRLESSPFLKRDFQWSVVDLDNWMKGNTFW 340
            MMRPPLAR A AGY+LSC RR R PPS PSSFTG TP           TRGWSSSGFA PGGDA AAE+PGLPSAFPWR+APDNRGVRGL ERAM+SVMQHQHRRFLRAATKLDDADDDAFLRAAEMAFVQVAAGVFQMPAHQVIAPLA+G G EGK+SS SGDRG RRDGLPVWDIPEGA+VDPRDVMHKDLA+FY+QAAVAAKVSRSTPFYRLHG  SCEISNVNVLWGAQRGDLPEEGETIEIWGSKY LKS+L+DIKAIS YR+SKDR VLDKPLSSIRKTTVQVDVDIGCTETFFVSDDRTEE+VQGSKA AVRKHRLRLESSPFLKRDFQWSVVDLD+WMKGNTFW
Sbjct:    1 MMRPPLARSAGAGYLLSCRRRCRPPPSFPSSFTGGTPPEAAAKSNGVATRGWSSSGFATPGGDASAAEVPGLPSAFPWREAPDNRGVRGLVERAMYSVMQHQHRRFLRAATKLDDADDDAFLRAAEMAFVQVAAGVFQMPAHQVIAPLADGEGDEGKSSSESGDRGRRRDGLPVWDIPEGALVDPRDVMHKDLADFYVQAAVAAKVSRSTPFYRLHGLRSCEISNVNVLWGAQRGDLPEEGETIEIWGSKYVLKSVLEDIKAISRYRVSKDRDVLDKPLSSIRKTTVQVDVDIGCTETFFVSDDRTEEIVQGSKAFAVRKHRLRLESSPFLKRDFQWSVVDLDDWMKGNTFW 352

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BLAST of mRNA_E_fasciculatus_S2_contig8777.16873.1 vs. uniprot
Match: D8LFT8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFT8_ECTSI)

HSP 1 Score: 403 bits (1035), Expect = 1.280e-137
Identity = 218/315 (69.21%), Postives = 232/315 (73.65%), Query Frame = 0

Query:   37 TRGWSSSGFAAPGGDAGAAEMPGLPSAFPWRDAPDNRGVRGLAERAMHSVMQHQHRRFLRAATKLDDADDDAFLRAAEMAFVQVAA--GVFQMPAHQVIAPLANGGGGEGKASSASGDRGIRR---------DGLPVWDIPEGAVVDPRDVMHKDLAEFYLQAAVAAKVSRSTPFYRLHGFSSCEISNVNVLWGAQRGDLPEEGETIEIWGSKYALKSLLQDIKAISSYRLSKDRAVLDKPLSSIRKTTVQVDVDIGCTETFFVSDDRTEEVVQGSKAVAVRKHRLRLESSPFLKRDFQWSVVDLDNWMKGNTFW 340
            TRGWSSSGFA PGGDAGAAEMPGLPSAFPWR+A DNRG+RGL ERAM+SVMQHQHRRFLRAATKLDDADDDAFL       V+     G+    A     P   GG          G R  +          DGLPVWDIPEGA+VDPRDVMHKDLAEFY+QAAVAAKVSRSTPFYRLHGF+SCEISNVNVLWGAQRGDLPEEGETIEIWGSKY LKS+L+DIKAIS YR++KDRA LDKPLSSIRKTTVQVDVDIGCTETFFVSD+RTEE                              VVDLDNWMKGNTFW
Sbjct:   55 TRGWSSSGFATPGGDAGAAEMPGLPSAFPWREATDNRGMRGLVERAMYSVMQHQHRRFLRAATKLDDADDDAFLATCRRNGVRPGGRRGLPDASASGYRTPHQRGGRRRKGVFGIGGPREEKACVYPTLYPGDGLPVWDIPEGALVDPRDVMHKDLAEFYVQAAVAAKVSRSTPFYRLHGFTSCEISNVNVLWGAQRGDLPEEGETIEIWGSKYVLKSVLEDIKAISRYRVNKDRAGLDKPLSSIRKTTVQVDVDIGCTETFFVSDNRTEE------------------------------VVDLDNWMKGNTFW 339

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig8777.16873.1 vs. uniprot

BLAST of mRNA_E_fasciculatus_S2_contig8777.16873.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5JXD5_9PHAE	7.340e-215	87.22	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LFT8_ECTSI	1.280e-137	69.21	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..23
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 10..18
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..9
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 19..23
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 24..340

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E_fasciculatus_S2_contig8777	contig	E_fasciculatus_S2_contig8777:2262..5827 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-07-07

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E_fasciculatus_S2_contig8777.16873.1	mRNA_E_fasciculatus_S2_contig8777.16873.1	Ectocarpus fasciculatus EfasUO2	mRNA	E_fasciculatus_S2_contig8777 1259..6226 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E_fasciculatus_S2_contig8777.16873.1 ID=prot_E_fasciculatus_S2_contig8777.16873.1|Name=mRNA_E_fasciculatus_S2_contig8777.16873.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=341bp
MMRPPLARRAAAGYVLSCGRRRRAPPSPSSFTGQTPTRGWSSSGFAAPGG
DAGAAEMPGLPSAFPWRDAPDNRGVRGLAERAMHSVMQHQHRRFLRAATK
LDDADDDAFLRAAEMAFVQVAAGVFQMPAHQVIAPLANGGGGEGKASSAS
GDRGIRRDGLPVWDIPEGAVVDPRDVMHKDLAEFYLQAAVAAKVSRSTPF
YRLHGFSSCEISNVNVLWGAQRGDLPEEGETIEIWGSKYALKSLLQDIKA
ISSYRLSKDRAVLDKPLSSIRKTTVQVDVDIGCTETFFVSDDRTEEVVQG
SKAVAVRKHRLRLESSPFLKRDFQWSVVDLDNWMKGNTFW*