prot_E_fasciculatus_S2_contig866.16772.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig866.16772.1
Unique Nameprot_E_fasciculatus_S2_contig866.16772.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length273
Homology
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig866.16772.1 vs. uniprot
Match: D7FIG5_ECTSI (Similar to Leucine rich repeat containing 15, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIG5_ECTSI)

HSP 1 Score: 179 bits (453), Expect = 6.660e-54
Identity = 92/99 (92.93%), Postives = 97/99 (97.98%), Query Frame = 0 
Query:   43 MSDCGLTDDDLDDLRSCLEAAGVSTIVELVLDTNGLTTLKPDVSGSSGTFDGMTSLEVLSLSSNELATLPADLFGSLTSLVSLFVDDNSDLTCLPDVPS 141
            MSDCGLT+DDLDD+RSCLEAAGVSTIVEL+LDTNGLT LKPDVSGSSGTFDGMTSLEVLSLS+NEL TLPADLFGSLTSLVSLFVDDNSDLTCLPD+PS
Sbjct:    1 MSDCGLTNDDLDDIRSCLEAAGVSTIVELLLDTNGLTALKPDVSGSSGTFDGMTSLEVLSLSANELTTLPADLFGSLTSLVSLFVDDNSDLTCLPDIPS 99
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig866.16772.1 vs. uniprot
Match: D8LR92_ECTSI (Hypothetical leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LR92_ECTSI)

HSP 1 Score: 87.0 bits (214), Expect = 1.160e-15
Identity = 71/220 (32.27%), Postives = 105/220 (47.73%), Query Frame = 0 
Query:   22 NSCVDPII-AGKCTIDGDGYLSMSDCGLTDDDLDDLRSCLEAAGVSTIVELVLDTNGLTTLKPDVSGSSGTFDGMTSLEVLSLSSNELA-TLPADLFGSLTSLVSLFVDDNSDLTCLPD----------------------------------------------VPSSDMETVSRSNTDIFNNVCECTPDESIFCDAGLTCQPGETGYTCVTATPSPTP 193
            N C+DP   A  C+++G   + +  CG+TDDDL+D+ +CL+  G  ++  L +  N LTT+ P+     G FDG+  LE L L++N L+ TL A+ F +L  L  L ++ NS LT LP                                               VP+S  + V    T+I + VC C+   ++ CD GL C PGE G+TC T+ P+P P
Sbjct:  179 NPCLDPASEAYLCSVNGT-EIHLDYCGITDDDLEDVETCLDVLGRGSMTALYVRFNYLTTI-PE-----GLFDGLGHLEKLYLNNNGLSETLSAESFQALGKLQVLNLNGNS-LTALPTDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLRLNPELQCVPASAADNVET--TEISSGVCGCSLAPAVLCDVGLACVPGELGFTCATSAPTPAP 388
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig866.16772.1 vs. uniprot
Match: A0A6H5JSZ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSZ2_9PHAE)

HSP 1 Score: 70.5 bits (171), Expect = 7.500e-11
Identity = 41/79 (51.90%), Postives = 50/79 (63.29%), Query Frame = 0 
Query:   21 VNSCVDPIIAGKCTIDGDGYLSMSDCGLTDDDLDDLRSCLEAAGVSTIVELVLDTNGLTTLKPDVSGSSGTFDGMTSLE 99
            VN C+D   A +C ID +G LS+  CG+TD D DDL SCLEAAG  TI  L L  N LTTL P+     G F G+T+L+
Sbjct:   21 VNVCLDSTDADRCQIDANGNLSLGLCGITDADFDDLASCLEAAGPETITTLYLSHNELTTL-PE-----GIFGGLTALQ 93
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig866.16772.1 vs. uniprot
Match: A0A6H5KAY3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAY3_9PHAE)

HSP 1 Score: 68.6 bits (166), Expect = 4.700e-10
Identity = 40/79 (50.63%), Postives = 47/79 (59.49%), Query Frame = 0 
Query:   21 VNSCVDPIIAGKCTIDGDGYLSMSDCGLTDDDLDDLRSCLEAAGVSTIVELVLDTNGLTTLKPDVSGSSGTFDGMTSLE 99
            VN C+D   A +C ID DG L +  CG+TD D DDL SCLE AG   I  L L  N LTTL P+     G F G+T+LE
Sbjct:  137 VNVCLDTTDADRCEIDADGQLDLYSCGITDADFDDLASCLEDAGPEAITYLSLSQNELTTL-PE-----GIFGGLTALE 209
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig866.16772.1 vs. uniprot
Match: D7FSS0_ECTSI (Hypothetical leucine rich repeat protein (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSS0_ECTSI)

HSP 1 Score: 64.7 bits (156), Expect = 5.360e-9
Identity = 41/105 (39.05%), Postives = 57/105 (54.29%), Query Frame = 0 
Query:   22 NSCVDPIIAGKCTIDGDGYLSMSDCGLTDDDLDDLRSCLEAAGVSTIVELVLDTNGLTTLKPDVSGSSGTFDGMTSLEVLSLSSNELATLPADLF----GSLTSL 122
            NSC DP         G   + + +CG+ D+DL+DLR C E  G +++  + +++N LT L     G +G F G  SL+ L L  N + TL AD F    GSLTSL
Sbjct:   38 NSCFDPEYDLYGCEPGSTQIDLDNCGIGDEDLEDLRECFENVGRASVTYIAMNSNSLTELP---GGENGLFAGFESLKTLGLVQNNIKTLYADSFEGLGGSLTSL 139
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig866.16772.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FIG5_ECTSI6.660e-5492.93Similar to Leucine rich repeat containing 15, part... [more]
D8LR92_ECTSI1.160e-1532.27Hypothetical leucine rich repeat protein n=2 Tax=E... [more]
A0A6H5JSZ2_9PHAE7.500e-1151.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KAY3_9PHAE4.700e-1050.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FSS0_ECTSI5.360e-939.05Hypothetical leucine rich repeat protein (Partial)... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 65..88
e-value: 400.0
score: 0.1
coord: 95..118
e-value: 1.6E-4
score: 31.0
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 39..170
e-value: 9.5E-15
score: 55.8
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 69..130
e-value: 1.2E-8
score: 34.6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..272
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..20
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.581
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 40..166

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig866contigE_fasciculatus_S2_contig866:16171..21026 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig866.16772.1mRNA_E_fasciculatus_S2_contig866.16772.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig866 16171..21026 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig866.16772.1 ID=prot_E_fasciculatus_S2_contig866.16772.1|Name=mRNA_E_fasciculatus_S2_contig866.16772.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=273bp
MRLLPCGLAAPFLFGGVAHGVNSCVDPIIAGKCTIDGDGYLSMSDCGLTD
DDLDDLRSCLEAAGVSTIVELVLDTNGLTTLKPDVSGSSGTFDGMTSLEV
LSLSSNELATLPADLFGSLTSLVSLFVDDNSDLTCLPDVPSSDMETVSRS
NTDIFNNVCECTPDESIFCDAGLTCQPGETGYTCVTATPSPTPPPTIPPT
PAPVMPPSPAPTPAPLVPTPAPSSPAPTRVPTPAPSPPPIPSFSSSRRAR
DTGCIFWTTTAGIFATLFVMNL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf
IPR003591Leu-rich_rpt_typical-subtyp