prot_E_fasciculatus_S2_contig8522.16658.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig8522.16658.1
Unique Nameprot_E_fasciculatus_S2_contig8522.16658.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length553
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig8522.16658.1 vs. uniprot
Match: A0A6H5L7F1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F1_9PHAE)

HSP 1 Score: 480 bits (1236), Expect = 5.150e-152
Identity = 329/432 (76.16%), Postives = 338/432 (78.24%), Query Frame = 0 
Query:  127 RLGFAAEVPRLAGGQIKTRCWKGGPTSSSEVQ-RSGLFEWGVVATSTSWRLGSSSXXXXXXXXDTTPSNPDTWRNRSERPPAVSSDTDGSSGAVXXXXXXXXXAYSALCPALHGADYGWSFPAGAEPPPTQXXXXXXXXXXXRIPPVGRRRGATEAERKAPGRGMALAADATGVXXXXDSPAGAHAATAVLTVEGDGPEELSGRRAXXXXXXXXXXXXXXGRAGAATGAFGGVRFDAAASAERSSSGGDLTAGAGRVDPDEVRRATVNTGGGRSXXXXXXXXXXXXXXXXXXXXXXXX----RPRGGGVATFESAEDKALRQMLLEATKSGRGGVALRALRLMVEENLLVSQKQYVGAMEACMRQGSWTSGLEVFRLLLEDLRPRGLSPKQSTWRSLARGLRSVGQADQALAVLRQALRAGVGGIDEQVCTL 553
            RLGFAAEVPRLAGGQIKTR WK   +SSSEVQ R GL EWGVVATSTSWRLGSS+ XXXXXXX T  SN DTWR+RSERPPAVSSD DGS  A  XXXXXXXXAYSALCPALHG    W FP   EPP   XXX        R PPVGRR  A E E K PGRG AL ADATGV    DS  GA AATAVLTVEGDG EELSGRR               GRAGAATGAFGGVRFD AASAE  S G  +T GAGRVDP E  RA V+TGGGRS    XXXXXXXXXXXXXXXXXX      R RGGG ATFESAED+ALRQ+LLEATKSGRGGVALRALRLMVEENL VSQKQYVGAMEACMRQGSWTSGLEVFRLLLEDLRPRGLSPKQSTWRSLARGLRS GQADQAL VLRQALRAGVGGIDEQVC++
Sbjct:  131 RLGFAAEVPRLAGGQIKTRWWKVSASSSSEVQQRRGLSEWGVVATSTSWRLGSSTTXXXXXXXXTPSSNADTWRHRSERPPAVSSDADGSGAADTXXXXXXXXAYSALCPALHG----WPFPEVVEPP-XXXXXVGRERERERPPPVGRRPSAAEVEAKVPGRGTALTADATGVASAADSH-GARAATAVLTVEGDGQEELSGRRVAAPGVAAAPRPPP-GRAGAATGAFGGVRFDVAASAEGGSGG--VTGGAGRVDPGEGGRAAVSTGGGRSGDSGXXXXXXXXXXXXXXXXXXKRATRKRLRGGGAATFESAEDRALRQLLLEATKSGRGGVALRALRLMVEENLSVSQKQYVGAMEACMRQGSWTSGLEVFRLLLEDLRPRGLSPKQSTWRSLARGLRSAGQADQALVVLRQALRAGVGGIDEQVCSI 553
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BLAST of mRNA_E_fasciculatus_S2_contig8522.16658.1 vs. uniprot
Match: D8LBV9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBV9_ECTSI)

HSP 1 Score: 169 bits (429), Expect = 3.640e-41
Identity = 86/90 (95.56%), Postives = 88/90 (97.78%), Query Frame = 0 
Query:  464 MVEENLLVSQKQYVGAMEACMRQGSWTSGLEVFRLLLEDLRPRGLSPKQSTWRSLARGLRSVGQADQALAVLRQALRAGVGGIDEQVCTL 553
            MVEENL VSQKQYVGAMEACMRQGSWTSGLEVFRLLLEDLRPRGLSPKQSTWRSLARGLRSVGQADQAL VLRQALRAGVGGIDEQVC++
Sbjct:    1 MVEENLSVSQKQYVGAMEACMRQGSWTSGLEVFRLLLEDLRPRGLSPKQSTWRSLARGLRSVGQADQALVVLRQALRAGVGGIDEQVCSI 90
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8522.16658.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L7F1_9PHAE5.150e-15276.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LBV9_ECTSI3.640e-4195.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 438..551
e-value: 8.7E-10
score: 40.4
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 35..553
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 27..34
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 15..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..34
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..14
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..29
score: 0.545
NoneNo IPR availableTMHMMTMhelixcoord: 20..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8522contigE_fasciculatus_S2_contig8522:2250..6572 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8522.16658.1mRNA_E_fasciculatus_S2_contig8522.16658.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig8522 2250..6572 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig8522.16658.1 ID=prot_E_fasciculatus_S2_contig8522.16658.1|Name=mRNA_E_fasciculatus_S2_contig8522.16658.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=553bp
MADSSRRRRRMPHPTVVPAFVVLASTAAATTTAASGGPAAVAPPPRRLTA
AFTSSTSGNRSSTPERRRDGRGRAGDGDGLGLGFESNTAGVMRTRGHPPG
TAAAGRRRRSLALLSSRLGSSSGSSSRLGFAAEVPRLAGGQIKTRCWKGG
PTSSSEVQRSGLFEWGVVATSTSWRLGSSSTTKRAGGNDTTPSNPDTWRN
RSERPPAVSSDTDGSSGAVTAAAAAAAAAYSALCPALHGADYGWSFPAGA
EPPPTQQQQEGRERERERIPPVGRRRGATEAERKAPGRGMALAADATGVA
AAADSPAGAHAATAVLTVEGDGPEELSGRRAAAPGAAPPPPPPPPGRAGA
ATGAFGGVRFDAAASAERSSSGGDLTAGAGRVDPDEVRRATVNTGGGRSG
GSGSGGGGTGGGGSGGRKRAARKRPRGGGVATFESAEDKALRQMLLEATK
SGRGGVALRALRLMVEENLLVSQKQYVGAMEACMRQGSWTSGLEVFRLLL
EDLRPRGLSPKQSTWRSLARGLRSVGQADQALAVLRQALRAGVGGIDEQV
CTL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf