prot_E_fasciculatus_S2_contig849.16617.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig849.16617.1
Unique Nameprot_E_fasciculatus_S2_contig849.16617.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length218
Homology
BLAST of mRNA_E_fasciculatus_S2_contig849.16617.1 vs. uniprot
Match: A0A6H5J8A4_9PHAE (AAA_12 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8A4_9PHAE)

HSP 1 Score: 286 bits (732), Expect = 3.670e-89
Identity = 170/223 (76.23%), Postives = 179/223 (80.27%), Query Frame = 0
Query:    1 VVRVGVITPYRGQVHCIQQEL--GGGGRRLKGGVEDGGVDAEVSTVDGFQGKEVDVVLFSCVRAPSAGGGRGGGG--IGFLADQRRMNVALTRARRSLVVLGNVGRLSSDETWKALVDHSKSRKRLEPEAAKGRTSVGGGRGG-DGEALCTRLEEASAGKQGKRDRSVDRQSTGREGGGRGQRGETDETVGSRGAGGSDKVEIQARRRRTGSRTGGHGGGDDS 218
            VVRVG+ITPYRGQVHCIQQEL  GGGGRRLKGGVEDGGVDAEVSTVDGFQGKEVDVVLFSCVRAPS+G         IGFLADQRRMNVALTRAR SL++LGNVGRLSSD TW ALVDHSKSR+RLEPE  K RTS G      DGEALC RLE+A+AGK+G RDRS DRQ TGR   GRG RGE D+ VGSR A GSD  EIQA RR  GSRTGGH  GD S
Sbjct:  127 VVRVGIITPYRGQVHCIQQELSGGGGGRRLKGGVEDGGVDAEVSTVDGFQGKEVDVVLFSCVRAPSSGXXXXXXXXXIGFLADQRRMNVALTRARCSLIILGNVGRLSSDATWNALVDHSKSRERLEPEVVKARTSGGXXXXXXDGEALCARLEKAAAGKKGGRDRSGDRQGTGRNQAGRGGRGEADDAVGSRVADGSDGKEIQAPRRAAGSRTGGHVRGDGS 349          
BLAST of mRNA_E_fasciculatus_S2_contig849.16617.1 vs. uniprot
Match: D8LLI3_ECTSI (Presumed helicase required for RNA polymerase II transcription termination and processing of RNAs n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLI3_ECTSI)

HSP 1 Score: 290 bits (742), Expect = 1.190e-87
Identity = 175/224 (78.12%), Postives = 179/224 (79.91%), Query Frame = 0
Query:    1 VVRVGVITPYRGQVHCIQQELGGGGR-----RLKGGVEDGGVDAEVSTVDGFQGKEVDVVLFSCVRAPSAGGGRGGGGIGFLADQRRMNVALTRARRSLVVLGNVGRLSSDETWKALVDHSKSRKRLEPEAAKGRTSVGGGRGG-DGEALCTRLEEASAGKQGKRDRSVDRQSTGREGGGRGQRGETDETVGSRGAGGSDKVEIQARRRRTGSRTGGHGGGDDS 218
            VVRVGVITPYRGQVHCIQQEL G        RLKGGVEDGGVDAEVSTVDGFQGKEVDVVLFSCVRAPS+G       IGFLADQRRMNVALTRARRSLVVLGNVGRLSSD TWKALVDHSKSR RLEPEA K RTS G      DGEALC RLEE +AGK+G RDRS DRQSTGR   GRG RGE D+ VGS  AGGSDK EIQA RR  GSRTGGHG GD S
Sbjct:  602 VVRVGVITPYRGQVHCIQQELSGXXXXXXXXRLKGGVEDGGVDAEVSTVDGFQGKEVDVVLFSCVRAPSSGXXXXXX-IGFLADQRRMNVALTRARRSLVVLGNVGRLSSDGTWKALVDHSKSRDRLEPEAVKARTSGGXXXXXXDGEALCARLEETAAGKKGGRDRSGDRQSTGRNRAGRGGRGEADDAVGSGVAGGSDKKEIQAPRRPAGSRTGGHGRGDGS 824          
BLAST of mRNA_E_fasciculatus_S2_contig849.16617.1 vs. uniprot
Match: A0A2E8QK80_9EURY (AAA_12 domain-containing protein n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A2E8QK80_9EURY)

HSP 1 Score: 103 bits (256), Expect = 8.150e-24
Identity = 53/117 (45.30%), Postives = 76/117 (64.96%), Query Frame = 0
Query:    4 VGVITPYRGQVHCIQQELGGGGRRLKGGVEDGGVDAEVSTVDGFQGKEVDVVLFSCVRAPSAGGGRGGGGIGFLADQRRMNVALTRARRSLVVLGNVGRLSSDETWKALVDHSKSRK 120
            +G++TPY GQV  I+  L            +  +  EV TVDG+QG+E DV++FSCVR+ S G       +GFL+D+RR+NVALTR++R LVV+GN   L  D+ W++ +DH +SRK
Sbjct:   87 IGIVTPYAGQVRAIRDIL-----------PESMMGVEVRTVDGYQGREKDVIIFSCVRSNSEGN------VGFLSDRRRLNVALTRSKRGLVVIGNPDTLRHDDDWRSWIDHVRSRK 186          
BLAST of mRNA_E_fasciculatus_S2_contig849.16617.1 vs. uniprot
Match: D8LE51_ECTSI (SEN1 protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE51_ECTSI)

HSP 1 Score: 107 bits (266), Expect = 4.660e-23
Identity = 60/137 (43.80%), Postives = 81/137 (59.12%), Query Frame = 0
Query:    3 RVGVITPYRGQVHCIQQELGGGGRRLKGGVEDGGVDAEVSTVDGFQGKEVDVVLFSCVRAPSA-----GGGRGGGGIGFLADQRRMNVALTRARRSLVVLGNVGRLSSDETWKALVDHSKSRKRLEPEAAKGRTSVG 134
            R+GVI PYR Q+  +Q+ +   G R  G         EVSTVDGFQG+E D+++FSCVRAP        G   GGGIGFL D RR+NVA+TRA+ ++ ++G+ G L     W+ L++ SK R      +  G TS G
Sbjct:  940 RIGVIAPYRNQIRALQRGMWSTGLRHDG--------VEVSTVDGFQGREKDIMIFSCVRAPELQRSGDSGSSSGGGIGFLDDWRRLNVAITRAKFAMWIVGHAGVLKQSTDWRELINDSKKRNAFIDSSNPGATSSG 1068          
BLAST of mRNA_E_fasciculatus_S2_contig849.16617.1 vs. uniprot
Match: A0A6H5JS06_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS06_9PHAE)

HSP 1 Score: 105 bits (263), Expect = 1.180e-22
Identity = 66/167 (39.52%), Postives = 91/167 (54.49%), Query Frame = 0
Query:    3 RVGVITPYRGQVHCIQQELGGGGRRLKGGVEDGGVDAEVSTVDGFQGKEVDVVLFSCVRAPSA-----GGGRGGGGIGFLADQRRMNVALTRARRSLVVLGNVGRLSSDETWKALVDHSKSRKRLEPEAAKGRTSVG---------GGRGGDG--EALCTRLEEASA 153
            ++GVI PYR Q+  +Q+ +   G R  G         EVSTVDGFQG+E D+++FSCVRAP        G   GGG+GFL D RR+NVA+TRA+ ++ ++G+ G L     W+ L++ SK R      +  G TS G         G  GGD   +   TR+ E  A
Sbjct: 1131 KIGVIAPYRNQIRALQRGMWSTGLRHDG--------VEVSTVDGFQGREKDIMIFSCVRAPELQRSGDSGSSSGGGVGFLDDWRRLNVAITRAKFAMWIVGHAGVLKQSTDWRELINDSKKRDAFIDSSNPGATSSGRNSGSNTSRGSNGGDSWTDTTSTRVLEKEA 1289          
BLAST of mRNA_E_fasciculatus_S2_contig849.16617.1 vs. uniprot
Match: W7TPV4_9STRA (Helicase sen1 n=3 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TPV4_9STRA)

HSP 1 Score: 105 bits (262), Expect = 1.690e-22
Identity = 60/117 (51.28%), Postives = 81/117 (69.23%), Query Frame = 0
Query:    6 VITPYRGQVHCIQQELGGGGRRLKGGVEDGGVDAEVSTVDGFQGKEVDVVLFSCVRAPSAGGGRGGGGIGFLADQRRMNVALTRARRSLVVLGNVGRLSSDETWKALVDHSKSRKRL 122
            VITPYR QV  +++ L     R++ G E+G   AEVST+DGFQG+E +V++FSCVRA   GG      IGFLAD+RRMNV LTRARRSL VL +   L +D +W+A ++ ++ R+ L
Sbjct: 2384 VITPYRAQVRLVEEHL-----RVRFG-EEGSSLAEVSTIDGFQGREKEVIIFSCVRANPQGGT-----IGFLADERRMNVGLTRARRSLFVLCHRASLWTDRSWRAFIEDAEERQSL 2489          
BLAST of mRNA_E_fasciculatus_S2_contig849.16617.1 vs. uniprot
Match: A0A067EWL0_CITSI (AAA_12 domain-containing protein n=1 Tax=Citrus sinensis TaxID=2711 RepID=A0A067EWL0_CITSI)

HSP 1 Score: 103 bits (256), Expect = 2.070e-22
Identity = 58/118 (49.15%), Postives = 77/118 (65.25%), Query Frame = 0
Query:    2 VRVGVITPYRGQVHCIQQELGGGGRRLKGGVEDGGVDAEVSTVDGFQGKEVDVVLFSCVRAPSAGGGRGGGGIGFLADQRRMNVALTRARRSLVVLGNVGRLSSDETWKALVDHSKSR 119
            V VG+ITPY+ Q+ C+Q E     R +    E  G D  ++TVD FQG+E DV++ SCVRA + G       +GF+AD RRMNVALTRARR+L V+GN G L+  + W AL+  SK+R
Sbjct:   96 VTVGIITPYKLQLKCLQHEF----RNVLNSEE--GKDLYINTVDAFQGQERDVIIMSCVRASNHG-------VGFVADIRRMNVALTRARRALWVMGNAGALTQSDDWAALIADSKAR 200          
BLAST of mRNA_E_fasciculatus_S2_contig849.16617.1 vs. uniprot
Match: Q0IZ90_ORYSJ (Os10g0118900 protein (Fragment) n=2 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q0IZ90_ORYSJ)

HSP 1 Score: 99.4 bits (246), Expect = 2.400e-22
Identity = 57/117 (48.72%), Postives = 75/117 (64.10%), Query Frame = 0
Query:    4 VGVITPYRGQVHCIQQELGGGGRRLKGGVEDGGVDAEVSTVDGFQGKEVDVVLFSCVRAPSAGGGRGGGGIGFLADQRRMNVALTRARRSLVVLGNVGRLSSDETWKALVDHSKSRK 120
            VG+ITPY+ Q+ C+Q+E            EDG  D  ++TVD FQG+E DV++ SCVRA + G       +GF+AD RRMNVALTRARR+L V+GN G L   E W  L+  +K+RK
Sbjct:   30 VGIITPYKLQLKCLQREF-----EEVMSTEDG-KDIYINTVDAFQGQERDVIIMSCVRASNHG-------VGFVADIRRMNVALTRARRALWVVGNAGALMQSEDWALLIADAKARK 133          
BLAST of mRNA_E_fasciculatus_S2_contig849.16617.1 vs. uniprot
Match: A0A662XGC1_9STRA (TFIIS N-terminal domain-containing protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XGC1_9STRA)

HSP 1 Score: 104 bits (260), Expect = 2.950e-22
Identity = 60/121 (49.59%), Postives = 78/121 (64.46%), Query Frame = 0
Query:    4 VGVITPYRGQVHCIQQELGGGGRRLKGGVEDGGVDAEVSTVDGFQGKEVDVVLFSCVRAPSAGGGRGGGGIGFLADQRRMNVALTRARRSLVVLGNVGRLSSDETWKALVDHSKSRKRLEP 124
            VG ++PY+ QV  ++QE+       + G+    V  EV+TVDGFQG+E DV++FSCVRA   GG      IGFL D RR+NVA+TRAR  L V+GNV  L  DETW ALV  ++ R+ L P
Sbjct: 1175 VGFVSPYKEQVRVLRQEI------TRSGIPSN-VSVEVNTVDGFQGREKDVIVFSCVRASRRGG------IGFLRDIRRLNVAITRARFCLYVVGNVNTLVRDETWAALVKSARDRRLLIP 1282          
BLAST of mRNA_E_fasciculatus_S2_contig849.16617.1 vs. uniprot
Match: G4YRP3_PHYSP (TFIIS N-terminal domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YRP3_PHYSP)

HSP 1 Score: 104 bits (259), Expect = 4.200e-22
Identity = 60/117 (51.28%), Postives = 76/117 (64.96%), Query Frame = 0
Query:    4 VGVITPYRGQVHCIQQELGGGGRRLKGGVEDGGVDAEVSTVDGFQGKEVDVVLFSCVRAPSAGGGRGGGGIGFLADQRRMNVALTRARRSLVVLGNVGRLSSDETWKALVDHSKSRK 120
            VG ++PY+ QV  ++QE+       K G+    V  EV+TVDGFQG+E DV++FSCVRA   GG      IGFL D RR+NVA+TRAR  L V+GNV  L  DETW ALV  ++ RK
Sbjct: 1954 VGFVSPYKEQVRVLRQEI------TKSGIPTT-VSIEVNTVDGFQGREKDVIIFSCVRASKRGG------IGFLRDIRRLNVAITRARFCLYVVGNVNTLVRDETWAALVKSARDRK 2057          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig849.16617.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J8A4_9PHAE3.670e-8976.23AAA_12 domain-containing protein n=1 Tax=Ectocarpu... [more]
D8LLI3_ECTSI1.190e-8778.13Presumed helicase required for RNA polymerase II t... [more]
A0A2E8QK80_9EURY8.150e-2445.30AAA_12 domain-containing protein n=1 Tax=Euryarcha... [more]
D8LE51_ECTSI4.660e-2343.80SEN1 protein n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A6H5JS06_9PHAE1.180e-2239.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
W7TPV4_9STRA1.690e-2251.28Helicase sen1 n=3 Tax=Nannochloropsis gaditana Tax... [more]
A0A067EWL0_CITSI2.070e-2249.15AAA_12 domain-containing protein n=1 Tax=Citrus si... [more]
Q0IZ90_ORYSJ2.400e-2248.72Os10g0118900 protein (Fragment) n=2 Tax=Oryza sati... [more]
A0A662XGC1_9STRA2.950e-2249.59TFIIS N-terminal domain-containing protein (Fragme... [more]
G4YRP3_PHYSP4.200e-2251.28TFIIS N-terminal domain-containing protein n=1 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041679DNA2/NAM7 helicase-like, AAA domainPFAMPF13087AAA_12coord: 3..99
e-value: 1.1E-29
score: 103.5
NoneNo IPR availableGENE3D3.40.50.300coord: 2..128
e-value: 4.5E-35
score: 122.8
NoneNo IPR availablePANTHERPTHR10887DNA2/NAM7 HELICASE FAMILYcoord: 3..150
NoneNo IPR availablePANTHERPTHR10887:SF382HELICASE SENATAXIN-RELATEDcoord: 3..150
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 4..119

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig849contigE_fasciculatus_S2_contig849:18636..19752 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig849.16617.1mRNA_E_fasciculatus_S2_contig849.16617.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig849 18636..19752 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig849.16617.1 ID=prot_E_fasciculatus_S2_contig849.16617.1|Name=mRNA_E_fasciculatus_S2_contig849.16617.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=218bp
VVRVGVITPYRGQVHCIQQELGGGGRRLKGGVEDGGVDAEVSTVDGFQGK
EVDVVLFSCVRAPSAGGGRGGGGIGFLADQRRMNVALTRARRSLVVLGNV
GRLSSDETWKALVDHSKSRKRLEPEAAKGRTSVGGGRGGDGEALCTRLEE
ASAGKQGKRDRSVDRQSTGREGGGRGQRGETDETVGSRGAGGSDKVEIQA
RRRRTGSRTGGHGGGDDS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR041679DNA2/NAM7-like_AAA