prot_E_fasciculatus_S2_contig8386.16517.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig8386.16517.1
Unique Nameprot_E_fasciculatus_S2_contig8386.16517.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length500
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8386.16517.1 vs. uniprot
Match: D8LR75_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR75_ECTSI)

HSP 1 Score: 522 bits (1345), Expect = 1.790e-176
Identity = 408/506 (80.63%), Postives = 416/506 (82.21%), Query Frame = 0
Query:    1 MDGAIQDDELWRRAFSANAGLFFDDQLSDFGPLLTGDDPAAAT-AAAGVADAALGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHQPHMRVQIACRPSTLVAXXXXXXXXXPPESENXXXXXXXXXXXXXXXXIGPAPESARSRANLQVTALSSNAAESTTPPLEQQAAAEGPSAEQQQ--GAPNQRGGESFSRKRDRAKLLRQQMNDGLDNLHEALVEISTSGANLSASAATSLIPTRGPRRAAVVACSAGLVRDLISTCIALRKDKVSLSGRLAEAQRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-GVASSAKVFGQLLSLSVFGFLGPQSLEEASKVSREWRDKCTWDCNWSTLCVSRWRIGPEQRHAEVWRAPDGADGKGKG--VARSVVSPPAPPPTWQSIYGRLHRDVHAPSGAFCPSHMVIGRSFQEGVAVWIALNRRSNGMTGRSVMTQGSTGLRMTEV 500
            MDGA+QDD+LWRRAFS NAGLFFD+Q +DFGPLLTGDD AAA  AAAGVAD  +GM  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    PH+RVQIACRPSTLVA XXXXXXXX      XXXXXXXXXXX     IGPAPESARS+ANL   ALS                            GAPNQRGGESFSRKRDRAKLLRQQMNDGLDNLHEALVEISTSGANLSASAATSLIPTRGPRRAAVVACSAGLVRDLISTCIALRKDK SLS R AEA RQ  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                 GVASSAKVFGQLLSLSVFGFLGPQSLEEASKVSREWRDKCTWDCNWSTLCVSRWR+GPEQRHAEVWR PD ADGKGK   VARS VSPPAPPPTWQSIYGRLH DVHAPSG FCPSHMVIGRS QEGVAVWIAL RRSNGMTGRSVMTQGSTGLR TEV
Sbjct:    1 MDGAMQDDDLWRRAFSTNAGLFFDEQ-ADFGPLLTGDDTAAALIAAAGVADPVVGMPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----PHVRVQIACRPSTLVAAXXXXXXXXXXXXXXXXXXXXXXXXXRQQRKIGPAPESARSKANLPA-ALSXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAPNQRGGESFSRKRDRAKLLRQQMNDGLDNLHEALVEISTSGANLSASAATSLIPTRGPRRAAVVACSAGLVRDLISTCIALRKDKASLSARFAEALRQLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSHGLDSGGAGGGAEAVVGVASSAKVFGQLLSLSVFGFLGPQSLEEASKVSREWRDKCTWDCNWSTLCVSRWRLGPEQRHAEVWRVPDDADGKGKXXXVARSAVSPPAPPPTWQSIYGRLHGDVHAPSGTFCPSHMVIGRSVQEGVAVWIALTRRSNGMTGRSVMTQGSTGLRTTEV 500          
BLAST of mRNA_E_fasciculatus_S2_contig8386.16517.1 vs. uniprot
Match: A0A6H5JYB8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYB8_9PHAE)

HSP 1 Score: 449 bits (1155), Expect = 1.270e-149
Identity = 283/319 (88.71%), Postives = 286/319 (89.66%), Query Frame = 0
Query:  189 GAPNQRGGESFSRKRDRAKLLRQQMNDGLDNLHEALVEISTSGANLSASAATSLIPTRGPRRAAVVACSAGLVRDLISTCIALRKDKVSLSGRLAEAQRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-GVASSAKVFGQLLSLSVFGFLGPQSLEEASKVSREWRDKCTWDCNWSTLCVSRWRIGPEQRHAEVWRAPDGADGKGK------GVARSVVSPPAPPPTWQSIYGRLHRDVHAPSGAFCPSHMVIGRSFQEGVAVWIALNRRSNGMTGRSVMTQGSTGLRMTEV 500
            GAPNQRGGESFSRKRDRAKLLRQQMNDGLDNLHEALVEISTSGANLSASAATSLIPTRGPRRAAVVACSAGLVRDLISTCIALRKDK SL  RLAEA RQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                 GVASSAKVFGQLLSLSVFGFLGPQSLEEASKVSR+WRDKCTWDCNWSTLCVSRWR+GPEQRHAEVWR PD ADG GK      GVARSV+SPPAPPPTWQSIYGRLHRDVHAPSG FCPSHMVIGRS QEGVAVWIALNRRSNGMTGRSVMTQGSTGLR TEV
Sbjct:   41 GAPNQRGGESFSRKRDRAKLLRQQMNDGLDNLHEALVEISTSGANLSASAATSLIPTRGPRRAAVVACSAGLVRDLISTCIALRKDKASLLARLAEALRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSHGRDSGGASGAVATAGVASSAKVFGQLLSLSVFGFLGPQSLEEASKVSRDWRDKCTWDCNWSTLCVSRWRLGPEQRHAEVWRVPDDADGTGKXXXXXKGVARSVLSPPAPPPTWQSIYGRLHRDVHAPSGTFCPSHMVIGRSVQEGVAVWIALNRRSNGMTGRSVMTQGSTGLRTTEV 359          
BLAST of mRNA_E_fasciculatus_S2_contig8386.16517.1 vs. uniprot
Match: A0A6H5JU73_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU73_9PHAE)

HSP 1 Score: 137 bits (345), Expect = 7.940e-31
Identity = 145/191 (75.92%), Postives = 154/191 (80.63%), Query Frame = 0
Query:    1 MDGAIQDDELWRRAFSANAGLFFDDQLSDFGPLLTG-DDPAAATAAAGVADAALGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHQPHMRVQIACRPSTLVAXXXXXXXXXPPESENXXXXXXXXXXXXXXXXIGPAPESARSRANLQVTALSSNAAESTTPPLEQQAAAEGPSAEQQQGA 190
            MDG +QDD+LWRRAFSANAGLF D+Q +DFGPLLTG DDPAA TAAAGVAD  +GM  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      HQPH+RVQIACRPSTLVA  XXXXXXX      XXXXXXXXXXXX    IGPAPESARSR N+   ALSSNAAEST   LEQQ AAEGP AE+QQ +
Sbjct:    1 MDGVMQDDDLWRRAFSANAGLFVDEQ-ADFGPLLTGGDDPAAVTAAAGVADPVVGMPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQ-----HQPHVRVQIACRPSTLVATPXXXXXXXXXXXXXXXXXXXXXXXXXQQRRIGPAPESARSRVNMPA-ALSSNAAESTAAALEQQVAAEGPPAEKQQAS 184          
BLAST of mRNA_E_fasciculatus_S2_contig8386.16517.1 vs. uniprot
Match: A0A835YLV5_9STRA (BHLH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLV5_9STRA)

HSP 1 Score: 108 bits (271), Expect = 1.790e-21
Identity = 62/188 (32.98%), Postives = 86/188 (45.74%), Query Frame = 0
Query:  346 ASSAKVFGQLLSLSVFGFLGPQSLEEASKVSREWRDKCTWDCNWSTLCVSRWRIGPEQRHAEVWRAPDGADGKGKGVARSVVSPP----------------------------APPPTWQSIYGRLHRDVHAPSGAFCPSHM----------------VIGRSFQEGVAVWIALNRRSNGMTGRSVMT 489
            +++A VFG   +L +  FL   SLE A +  R+WR +C WDC W+  C +RWR+  + R  E W+A        + + R   +P                             APP +W+ +Y  LHR++  P GA C S                  VIGR+   G  VW+AL RRSNGMT RSV+T
Sbjct:  287 SAAAAVFGASCALPIHAFLDAASLEAARRACRDWRARCAWDCTWARQCAARWRLRGQDRALEAWQARFSRVSNAQRLRRRDCAPETRAGALLRAGERCHAQLEQYYRDPEALAAPPVSWREVYCALHRELRLPDGALCVSAAAXXXXXAPHALGRGEDVIGRAAGGGACVWVALCRRSNGMTARSVVT 474          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8386.16517.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LR75_ECTSI1.790e-17680.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JYB8_9PHAE1.270e-14988.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JU73_9PHAE7.940e-3175.92Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A835YLV5_9STRA1.790e-2132.98BHLH domain-containing protein n=1 Tax=Tribonema m... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 275..295
NoneNo IPR availableGENE3D1.20.1280.50coord: 349..447
e-value: 2.4E-6
score: 29.4
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 357..441

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8386contigE_fasciculatus_S2_contig8386:206..3824 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8386.16517.1mRNA_E_fasciculatus_S2_contig8386.16517.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig8386 206..3824 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig8386.16517.1 ID=prot_E_fasciculatus_S2_contig8386.16517.1|Name=mRNA_E_fasciculatus_S2_contig8386.16517.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=500bp
MDGAIQDDELWRRAFSANAGLFFDDQLSDFGPLLTGDDPAAATAAAGVAD
AALGMPPPSPAPASSNVASLAPMPFVAAAAPAPAIRQQQQQQRHQPHMRV
QIACRPSTLVAAPPPPPPPAPPESENPPSRPAPPPSQRQQRKIGPAPESA
RSRANLQVTALSSNAAESTTPPLEQQAAAEGPSAEQQQGAPNQRGGESFS
RKRDRAKLLRQQMNDGLDNLHEALVEISTSGANLSASAATSLIPTRGPRR
AAVVACSAGLVRDLISTCIALRKDKVSLSGRLAEAQRQQQQQQQQQGASD
GSSAHLQGGAGAAAGGDGETAARKKHDDGGSHGRDSGGAAAAAGVASSAK
VFGQLLSLSVFGFLGPQSLEEASKVSREWRDKCTWDCNWSTLCVSRWRIG
PEQRHAEVWRAPDGADGKGKGVARSVVSPPAPPPTWQSIYGRLHRDVHAP
SGAFCPSHMVIGRSFQEGVAVWIALNRRSNGMTGRSVMTQGSTGLRMTEV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036047F-box-like_dom_sf