prot_E_fasciculatus_S2_contig8218.16372.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E_fasciculatus_S2_contig8218.16372.1
Unique Name	prot_E_fasciculatus_S2_contig8218.16372.1
Type	polypeptide
Organism	Ectocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length	238

Homology

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BLAST of mRNA_E_fasciculatus_S2_contig8218.16372.1 vs. uniprot
Match: A0A6H5L123_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L123_9PHAE)

HSP 1 Score: 358 bits (920), Expect = 5.100e-118
Identity = 195/233 (83.69%), Postives = 197/233 (84.55%), Query Frame = 0

Query:    9 RDSQPPG----AAASPVRSEDGNFVDGVGARLGVGGGRGGASAGAKRRINLSDHHGVAAEFTARDPEGGXXXXXXXXXXXIDGMPPPRRGLRHSQSIPGGTFPQGPLLARALTEIDRGIEEASNRRTSHLRTAKALATLWLALLAGGAVAKSDDGFMGYIARGAAGVFGGFLCTAASALFLLYWFSAKEEVQGLKEVFQTATNYERHLPMEEAFPDGGFDASQLYSYMEQNFR 237
            RDSQP G    AAASPVRSEDGNFVDGVGA L           GAKRRINLSDHHGV AEFTARDPEG            +DGMPPPRRGLRHSQSIPGGTFPQGPLLARALTEIDRGIEEA NRRTSHLRTAKALATLWLALLAGGA+AKSD G MGYIARGAAGVFGG LCTAASALFLLYWFSAKEEVQGLKEVFQTATNYERHLPMEEAFPDGGFD  QLYSYMEQNFR
Sbjct:  394 RDSQPRGGVRAAAASPVRSEDGNFVDGVGAGLXXXXXXXXXXDGAKRRINLSDHHGVGAEFTARDPEGDDDDNHSSLDDDVDGMPPPRRGLRHSQSIPGGTFPQGPLLARALTEIDRGIEEALNRRTSHLRTAKALATLWLALLAGGAMAKSD-GSMGYIARGAAGVFGGVLCTAASALFLLYWFSAKEEVQGLKEVFQTATNYERHLPMEEAFPDGGFDTLQLYSYMEQNFR 625

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BLAST of mRNA_E_fasciculatus_S2_contig8218.16372.1 vs. uniprot
Match: D8LH10_ECTSI (Similar to neutral Sphingomyelinase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH10_ECTSI)

HSP 1 Score: 310 bits (794), Expect = 2.040e-100
Identity = 162/180 (90.00%), Postives = 164/180 (91.11%), Query Frame = 0

Query:   58 HHGVAAEFTARDPEGGXXXXXXXXXXXIDGMPPPRRGLRHSQSIPGGTFPQGPLLARALTEIDRGIEEASNRRTSHLRTAKALATLWLALLAGGAVAKSDDGFMGYIARGAAGVFGGFLCTAASALFLLYWFSAKEEVQGLKEVFQTATNYERHLPMEEAFPDGGFDASQLYSYMEQNFR 237
            H  VAAEFTARDPEGG  XX       IDGMPPPRRGLRHSQSIPGGTFPQGPLLARALTEIDRGIEEASNRRT HLRTAKALATLWLALLAGGAVAKSD G MGYIARGAAGVFGG LCTAASALFLLYWFSAK+EVQGLKEVFQTATNYERHLPMEEAFPDGGFD SQLYSYMEQ+FR
Sbjct:  336 HRAVAAEFTARDPEGGDDXXHSSLDDDIDGMPPPRRGLRHSQSIPGGTFPQGPLLARALTEIDRGIEEASNRRTCHLRTAKALATLWLALLAGGAVAKSD-GLMGYIARGAAGVFGGVLCTAASALFLLYWFSAKQEVQGLKEVFQTATNYERHLPMEEAFPDGGFDTSQLYSYMEQHFR 514

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig8218.16372.1 vs. uniprot

BLAST of mRNA_E_fasciculatus_S2_contig8218.16372.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5L123_9PHAE	5.100e-118	83.69	Endo/exonuclease/phosphatase domain-containing pro...	[more]
D8LH10_ECTSI	2.040e-100	90.00	Similar to neutral Sphingomyelinase, putative n=1 ...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 155..159
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 137..154
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..136
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 160..189
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 190..237
None	No IPR available	TMHMM	TMhelix		coord: 137..154
None	No IPR available	TMHMM	TMhelix		coord: 169..191

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E_fasciculatus_S2_contig8218	contig	E_fasciculatus_S2_contig8218:327..2887 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-07-07

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E_fasciculatus_S2_contig8218.16372.1	mRNA_E_fasciculatus_S2_contig8218.16372.1	Ectocarpus fasciculatus EfasUO2	mRNA	E_fasciculatus_S2_contig8218 174..4456 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E_fasciculatus_S2_contig8218.16372.1 ID=prot_E_fasciculatus_S2_contig8218.16372.1|Name=mRNA_E_fasciculatus_S2_contig8218.16372.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=238bp
MGSSNSSSRDSQPPGAAASPVRSEDGNFVDGVGARLGVGGGRGGASAGAK
RRINLSDHHGVAAEFTARDPEGGDDDDDNSLDDDIDGMPPPRRGLRHSQS
IPGGTFPQGPLLARALTEIDRGIEEASNRRTSHLRTAKALATLWLALLAG
GAVAKSDDGFMGYIARGAAGVFGGFLCTAASALFLLYWFSAKEEVQGLKE
VFQTATNYERHLPMEEAFPDGGFDASQLYSYMEQNFR*