prot_E_fasciculatus_S2_contig7493.15656.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig7493.15656.1
Unique Nameprot_E_fasciculatus_S2_contig7493.15656.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length87
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7493.15656.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 32..55
e-value: 2.7E-4
score: 30.3
coord: 56..79
e-value: 8.3E-4
score: 28.6
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 5..86
e-value: 7.1E-20
score: 73.1
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 42..86
e-value: 2.0E-8
score: 33.9
NoneNo IPR availablePANTHERPTHR24366FAMILY NOT NAMEDcoord: 14..86
NoneNo IPR availablePANTHERPTHR24366:SF102LEUCINE RICH REPEAT CONTAINING 15coord: 14..86
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 17..86

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7493contigE_fasciculatus_S2_contig7493:4329..6072 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7493.15656.1mRNA_E_fasciculatus_S2_contig7493.15656.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig7493 4329..6072 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig7493.15656.1 ID=prot_E_fasciculatus_S2_contig7493.15656.1|Name=mRNA_E_fasciculatus_S2_contig7493.15656.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=87bp
SLSQSENFDGLGFRSMHLNPLTTLAAGVFDSLTSLTGLYLSHNDLAALPA
GIFDSLKDLQDLDLGSNELTTLPAGIFNSLTSLTDL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf
IPR003591Leu-rich_rpt_typical-subtyp