prot_E_fasciculatus_S2_contig7472.15638.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E_fasciculatus_S2_contig7472.15638.1
Unique Name	prot_E_fasciculatus_S2_contig7472.15638.1
Type	polypeptide
Organism	Ectocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length	1328

Homology

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BLAST of mRNA_E_fasciculatus_S2_contig7472.15638.1 vs. uniprot
Match: D7G3H2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3H2_ECTSI)

HSP 1 Score: 1760 bits (4559), Expect = 0.000e+0
Identity = 1040/1330 (78.20%), Postives = 1061/1330 (79.77%), Query Frame = 0

Query:    1 MATGAHGGEDHAASCAPPIEVVHAFGSCPDKVRDNICALDEERVVYVVGSRIAVTAPADGSSSANDSSSSGGSSRLEFLSTGLRVARVTAVACSPDRRFVAACYKAVVEEDRNQTTAYATVYHMPSRPRASRVKTLSYERPRRQQQQGHLRSGGRSRSSNXXXXXXXXXXXYCSSTTSSGGTGDKGCGRLSPPPTALPSATAEFATATFSHDGQILALLDGSPAWTLLWFEWKTGKRMFTVQLDSPVHRVSLSPFDNSKTATAGADGLFRIWSTQQGGKVSCMVPIPGLRGDVCYRDVAWLNADRLVLAAHEGTVTLVSPNEVLQEWNLGRSDGLGTSSLPPTGDGADDSASSVGTDDTLSAAGVHGGSLNVVATHRRGFFVGGSHGQVLVFEQETRAGGASGGRETYALARVVRIFGVGLVELKPTMEPDYRWLLAGGEDGEIGLLDTDEIFSAVPDGDSLASSXXXXXXXXXXXXXXXLASGTTGQPATDEKKRTPVPRLCRGGGHASASAA-GVAVETSSGSAADGGGEAVSRGFAKAMDAFEDSLRAAADAELASTGSGSRQQVGNHKGSASLSAGPSSASASRETPGKVKGNPQYRPVARALGVRGMKGGEGGGGSLSCLAVCARKPLLAAIARGGGGISARAGEHLNLGDDESSDVGDESRSATADSKADSGMPRKKXXXXXXXXXXXXPAIGASAGGVAGGSEIQIWNYRTKRLLVRHRFGGDASSGNGGAQAGELLGSVVVAGGDDQGXGDGEDAGGVHEEGATCPVSISLHPSGDSIAVAFPHCVNVFYIVGSGGEAIGDQDNGXXXXXXXVTDPVTSKEPLSMSLQQLGVADAVAAVEMAPLATLRSDQREILTKGMFSVPGEQEPIINCEPVSAVHYSPGGHLIAVVTGKVVQVLGVHSGTAGGRLGRVQTLSGHVSDVSAFCWGADNRRCWTAADGYIFEWEARNENVGSGLGALGTDKVRRGEFVSKRVAFESIVADPSLDGGLVACXXXXXXXXXXXXXXXXXXXXXXGRKLSHATMSKLDGGARGKSQRGSGLLSAAAPAAENCSPHVGATAKRTNSNSNDGNATAELQAPRVGGSDNKTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSRVATAEAARVGDRCQSSS-FFVWPPKLEPVSGEPGLEVRVPHRLTCVRATAFETRYRGAHNILLAGTKGGLALAFDWGCLLRDSAAGDDEQKGDRREKGGVLMPSAQVCLHSLPITSLALTVDGKHFFTAAGDGSVFMCKVQLEGRHTTMSNNRGATISSVAANASSSFPPRSKPKPNVVATSPQHVSK 1328
            MATGAHG EDHAASCAPPIEVVHAFGSCPDKVRDNICALDEERVVYVVGSR+AVTAPA+GS  AND  S  GSSRLEFLSTGLRVARVTAVACSPDRRFVAACYKAVVEED NQT AYATVYHMPSRPRASRVKTLSYERPRRQQQQGHLRSGGRSRSSN           YCS T SSGGTGDKGCGR SPPPT LPSATAEFATATFSHDGQILALLDGSPAWTLLWFEWKTGKRMFTVQLDSPVHRV+LSPFDNSKT TAGADGLFRIWSTQQGGKVSCMVPIPGLRGDVCYRDVAWLNADRLVLAAHEGTVTLVSPNEVLQEW+L RSDGLG SS PP GDGA DSA SVGTDDTLSA GVHGGSLNVVATHRRGFFVGGS GQVLVFEQETRAGGASGGRETYALARVVRIFGV LVEL+PTMEPDYRWLLAGGEDGEIGLLDTDEIFSAVPDGDSL SSXXXXXXXXXXXXXXX                TPVPRLCRGGGHA A+A  GVA+ET      DGGGEAVSRGFAKAMDAFEDSLRAAADAELASTG+GSRQQ GNH+GSASLSAGPSSASASRET GKVK N QYRPVARALGVRGM G    G                                                                XXXXXXXXXXXX    ASAGG+ G SEIQIWNYRTKRLL                 AGELLGSVVVAGGDDQ  GDG DAGGV EEGATCPVSISLHPSGDSIAVAFPHCVNVFYIVGSGGEAIGDQDN        VTDPVTSKEPLSMSLQQLGVA+AVAAVEMAPLATLRSDQREILTKGMFSVPGEQEPIINCEPVSAVHYSPGGHLIAVVTGKVVQVLGVHSGTAGGRLGRVQTLSGH SDVSAFCWGADNRRCWTAADGYIFEWE     VGSGLGALGTDKVRRGEFVSKRVAFE IVADP+LDGGLVACXXXXXXXXXXXXXX        GRKLS  TM KLDGGARGKSQRGSGL SAA PAAENCSPH+G   KRTNSN NDGNATAELQAP VGGS+  TG                                           GSRVATA+AAR+GDRCQSSS FFVWPPKLEP+SGEPGLE                TRYRGAHN+LLAGTKGGLALAFDWGCLLRDSAAGD+E KGD REKGGVL+PSAQVCLHSLPITSLALT DGKHFFTAA DG+VFMCKVQLEGRHTT SN RGAT S V  NA SSFPPR KPKPN VATS QHVSK
Sbjct:    1 MATGAHGDEDHAASCAPPIEVVHAFGSCPDKVRDNICALDEERVVYVVGSRVAVTAPANGS--ANDGGS--GSSRLEFLSTGLRVARVTAVACSPDRRFVAACYKAVVEEDPNQTAAYATVYHMPSRPRASRVKTLSYERPRRQQQQGHLRSGGRSRSSNSSRSSSRHDS-YCS-TASSGGTGDKGCGRFSPPPTVLPSATAEFATATFSHDGQILALLDGSPAWTLLWFEWKTGKRMFTVQLDSPVHRVALSPFDNSKTVTAGADGLFRIWSTQQGGKVSCMVPIPGLRGDVCYRDVAWLNADRLVLAAHEGTVTLVSPNEVLQEWDLSRSDGLGASSFPPDGDGAGDSAGSVGTDDTLSA-GVHGGSLNVVATHRRGFFVGGSRGQVLVFEQETRAGGASGGRETYALARVVRIFGVSLVELRPTMEPDYRWLLAGGEDGEIGLLDTDEIFSAVPDGDSLTSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPVPRLCRGGGHAPATAXXGVALETXX-XXTDGGGEAVSRGFAKAMDAFEDSLRAAADAELASTGTGSRQQGGNHRGSASLSAGPSSASASRETGGKVKANTQYRPVARALGVRGMLGE---GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASAGGIDGSSEIQIWNYRTKRLL-----------------AGELLGSVVVAGGDDQVGGDGTDAGGVREEGATCPVSISLHPSGDSIAVAFPHCVNVFYIVGSGGEAIGDQDNACGGGGGGVTDPVTSKEPLSMSLQQLGVAEAVAAVEMAPLATLRSDQREILTKGMFSVPGEQEPIINCEPVSAVHYSPGGHLIAVVTGKVVQVLGVHSGTAGGRLGRVQTLSGHASDVSAFCWGADNRRCWTAADGYIFEWE-----VGSGLGALGTDKVRRGEFVSKRVAFEGIVADPTLDGGLVACXXXXXXXXXXXXXXKNRADADGGRKLSRGTMGKLDGGARGKSQRGSGLPSAA-PAAENCSPHLGNAPKRTNSNGNDGNATAELQAPGVGGSNTNTGGERRSKRRHLEPSSTCATTGGSTAPVSLLPRGSSAAAARRG--GSRVATADAARLGDRCQSSSSFFVWPPKLEPISGEPGLE----------------TRYRGAHNVLLAGTKGGLALAFDWGCLLRDSAAGDEE-KGDLREKGGVLVPSAQVCLHSLPITSLALTADGKHFFTAAEDGAVFMCKVQLEGRHTTTSNTRGATTS-VVGNAYSSFPPRPKPKPNAVATSSQHVSK 1276

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig7472.15638.1 vs. uniprot

BLAST of mRNA_E_fasciculatus_S2_contig7472.15638.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7G3H2_ECTSI	0.000e+0	78.20	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 872..906 e-value: 300.0 score: 1.4 coord: 915..953 e-value: 0.39 score: 19.6 coord: 1240..1279 e-value: 1.9 score: 15.3 coord: 234..273 e-value: 0.48 score: 19.0
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 200..471 e-value: 2.7E-13 score: 51.7
None	No IPR available	PANTHER	PTHR32215	FAMILY NOT NAMED	coord: 773..1292 coord: 17..726
None	No IPR available	SUPERFAMILY	82171	DPP6 N-terminal domain-like	coord: 707..1307
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 87..469

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E_fasciculatus_S2_contig7472	contig	E_fasciculatus_S2_contig7472:510..7175 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-07-07

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E_fasciculatus_S2_contig7472.15638.1	mRNA_E_fasciculatus_S2_contig7472.15638.1	Ectocarpus fasciculatus EfasUO2	mRNA	E_fasciculatus_S2_contig7472 510..7175 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E_fasciculatus_S2_contig7472.15638.1 ID=prot_E_fasciculatus_S2_contig7472.15638.1|Name=mRNA_E_fasciculatus_S2_contig7472.15638.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=1328bp
MATGAHGGEDHAASCAPPIEVVHAFGSCPDKVRDNICALDEERVVYVVGS
RIAVTAPADGSSSANDSSSSGGSSRLEFLSTGLRVARVTAVACSPDRRFV
AACYKAVVEEDRNQTTAYATVYHMPSRPRASRVKTLSYERPRRQQQQGHL
RSGGRSRSSNGSSRSSGRHDSYCSSTTSSGGTGDKGCGRLSPPPTALPSA
TAEFATATFSHDGQILALLDGSPAWTLLWFEWKTGKRMFTVQLDSPVHRV
SLSPFDNSKTATAGADGLFRIWSTQQGGKVSCMVPIPGLRGDVCYRDVAW
LNADRLVLAAHEGTVTLVSPNEVLQEWNLGRSDGLGTSSLPPTGDGADDS
ASSVGTDDTLSAAGVHGGSLNVVATHRRGFFVGGSHGQVLVFEQETRAGG
ASGGRETYALARVVRIFGVGLVELKPTMEPDYRWLLAGGEDGEIGLLDTD
EIFSAVPDGDSLASSGGGGGGPTRRKGGATLASGTTGQPATDEKKRTPVP
RLCRGGGHASASAAGVAVETSSGSAADGGGEAVSRGFAKAMDAFEDSLRA
AADAELASTGSGSRQQVGNHKGSASLSAGPSSASASRETPGKVKGNPQYR
PVARALGVRGMKGGEGGGGSLSCLAVCARKPLLAAIARGGGGISARAGEH
LNLGDDESSDVGDESRSATADSKADSGMPRKKRQRQQQQQQQQQPAIGAS
AGGVAGGSEIQIWNYRTKRLLVRHRFGGDASSGNGGAQAGELLGSVVVAG
GDDQGGGDGEDAGGVHEEGATCPVSISLHPSGDSIAVAFPHCVNVFYIVG
SGGEAIGDQDNGGGGGGGGVTDPVTSKEPLSMSLQQLGVADAVAAVEMAP
LATLRSDQREILTKGMFSVPGEQEPIINCEPVSAVHYSPGGHLIAVVTGK
VVQVLGVHSGTAGGRLGRVQTLSGHVSDVSAFCWGADNRRCWTAADGYIF
EWEARNENVGSGLGALGTDKVRRGEFVSKRVAFESIVADPSLDGGLVACC
VSGGGGGGGGGDDKNRADDDGGRKLSHATMSKLDGGARGKSQRGSGLLSA
AAPAAENCSPHVGATAKRTNSNSNDGNATAELQAPRVGGSDNKTGGGRRS
KRRHLEPSSTCATTGGSTAPVSLLPRGSSAAAAALRGGGSRVATAEAARV
GDRCQSSSFFVWPPKLEPVSGEPGLEVRVPHRLTCVRATAFETRYRGAHN
ILLAGTKGGLALAFDWGCLLRDSAAGDDEQKGDRREKGGVLMPSAQVCLH
SLPITSLALTVDGKHFFTAAGDGSVFMCKVQLEGRHTTMSNNRGATISSV
AANASSSFPPRSKPKPNVVATSPQHVSK

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036322	WD40_repeat_dom_sf
IPR015943	WD40/YVTN_repeat-like_dom_sf
IPR001680	WD40_repeat