prot_E_fasciculatus_S2_contig7321.15514.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig7321.15514.1
Unique Nameprot_E_fasciculatus_S2_contig7321.15514.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length600
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7321.15514.1 vs. uniprot
Match: A0A6H5L7V8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7V8_9PHAE)

HSP 1 Score: 323 bits (827), Expect = 5.760e-95
Identity = 221/298 (74.16%), Postives = 231/298 (77.52%), Query Frame = 0
Query:    1 MVGYVAKNGQAFEDRVRKREVSNPTFDFLSPTNKFHAYYKRQLALAKGEPVPPAPRQGDKGGAPATGGSSNSDVGRAPGAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVVGGMEGESAKPGASASQENGSAASVSLTARTKRRRSQDESXXXXXXXXNSADGDNAASTAAAPVDASSVAVNLREKLGAKLGIALSTINDRRGKADDGSQEAEEDEKGENDPTPGSASGSRGRVSAEGKVGESASQPEPEG-------AEGGRRADDEETRRANRLKRMRLMSGHYKLAVLEHSSE 291
            MVGYVAKNGQAFEDRV+KRE SNPTFDFL+P NKFHAYYKRQLALAKGEPV PAP QG+ GGAPATGGSSNSDVGRA GAV            XXXXXXXXXXXX      V GG EGESAKPGA ASQENGSAAS SLTA TKRRR QDES   XXXXX             APVDASS A NLREK G KL +ALST+ D+RGKA DG Q A+ D+KGE DPTPGSASGSRGR+SAEGKV  +ASQPEPEG       AEGGR ADDEETRRANRLKRMRLMSGHYKLAVLEHSSE
Sbjct:  452 MVGYVAKNGQAFEDRVKKREASNPTFDFLNPANKFHAYYKRQLALAKGEPVQPAPGQGNTGGAPATGGSSNSDVGRAAGAVPGSSASQRPSSSXXXXXXXXXXXXTPCGIAVGGGTEGESAKPGAPASQENGSAASGSLTAGTKRRRPQDESGGSXXXXXXXXXXXX---XXXAPVDASSAAGNLREKQGDKLRMALSTVKDKRGKAGDGRQAADGDKKGEGDPTPGSASGSRGRLSAEGKVC-AASQPEPEGVGAPSSAAEGGR-ADDEETRRANRLKRMRLMSGHYKLAVLEHSSE 744          
BLAST of mRNA_E_fasciculatus_S2_contig7321.15514.1 vs. uniprot
Match: D7FJ62_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ62_ECTSI)

HSP 1 Score: 298 bits (762), Expect = 1.110e-86
Identity = 203/273 (74.36%), Postives = 208/273 (76.19%), Query Frame = 0
Query:    1 MVGYVAKNGQAFEDRVRKREVSNPTFDFLSPTNKFHAYYKRQLALAKGEPVPPAPRQGDKGGAPATGGSSNSDVGRAPGAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVVGGMEGESAKPGASASQENGSAASVSLTARTKRRRSQDESXXXXXXXXNSADGDNAASTAAAPVDASSVAVNLREKLGAKLGIALSTINDRRGKADDGSQEAEEDEKGENDPTPGSASGSRGRVSAEGKVGESASQPEPEGA-------EGGRRADDEETR 266
            MVGYVAKNGQAFEDRVRKREVSNPTFDFL+P NKFHAYYKRQLALAKGEPV PAP QG+ GGAPATGGSSNSDV       XXXXXXX  XXX   XX             V GG EGESAKPGA A QENGSAASVSLTA  KRRR QDESXX      NSADGD+A STAA PVD SS   NLREKLG KLGIALST+NDRRGKADDG Q  E DEKGE DPTPGSASG RGRVSAEGKV  +ASQPEPEGA       EGGR ADDEETR
Sbjct:  431 MVGYVAKNGQAFEDRVRKREVSNPTFDFLNPANKFHAYYKRQLALAKGEPVSPAPGQGNTGGAPATGGSSNSDVRXXXXXXXXXXXXXRPXXXYTAXXTAASVGGASCGIAVGGGTEGESAKPGAPADQENGSAASVSLTAGKKRRRPQDESXXGGSNG-NSADGDDATSTAAGPVDTSSAEGNLREKLGDKLGIALSTVNDRRGKADDGRQVVEGDEKGEGDPTPGSASGRRGRVSAEGKV-RAASQPEPEGAGAPSSAAEGGR-ADDEETR 700          
BLAST of mRNA_E_fasciculatus_S2_contig7321.15514.1 vs. uniprot
Match: A0A7J7IYS6_BUGNE (Uncharacterized protein n=1 Tax=Bugula neritina TaxID=10212 RepID=A0A7J7IYS6_BUGNE)

HSP 1 Score: 59.7 bits (143), Expect = 1.420e-5
Identity = 24/55 (43.64%), Postives = 40/55 (72.73%), Query Frame = 0
Query:    4 YVAKNGQAFEDRVRKREVSNPTFDFLSPTNKFHAYYK---RQLALAKGEPVPPAP 55
            +VA+NG +FE+R++  E++NP F+FL+PT+ +HAYY+   ++    KG+ V P P
Sbjct:   55 FVARNGPSFEERIKANEINNPKFNFLTPTDPYHAYYQHKVKEFGEGKGQDVVPQP 109          
BLAST of mRNA_E_fasciculatus_S2_contig7321.15514.1 vs. uniprot
Match: UPI000C758172 (splicing factor 3A subunit 1-like isoform X1 n=2 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C758172)

HSP 1 Score: 58.5 bits (140), Expect = 3.070e-5
Identity = 23/49 (46.94%), Postives = 39/49 (79.59%), Query Frame = 0
Query:    3 GYVAKNGQAFEDRVRKREVSNPTFDFLSPTNKFHAYYKRQLA-LAKGEP 50
            G+VA+NGQ FE R+++ EV+NP F+FL+P + +HAYY+ ++  + +G+P
Sbjct:   26 GFVARNGQEFEHRIKQNEVNNPKFNFLNPGDPYHAYYQHKVVQIREGKP 74          
BLAST of mRNA_E_fasciculatus_S2_contig7321.15514.1 vs. uniprot
Match: A0A8K0SGF4_9HYPO (Pre-mRNA splicing factor PRP21 like protein-domain-containing protein n=1 Tax=Stachybotrys elegans TaxID=80388 RepID=A0A8K0SGF4_9HYPO)

HSP 1 Score: 58.2 bits (139), Expect = 3.360e-5
Identity = 23/42 (54.76%), Postives = 32/42 (76.19%), Query Frame = 0
Query:    3 GYVAKNGQAFEDRVRKREVSNPTFDFLSPTNKFHAYYKRQLA 44
            GYVA+NG  FEDR+R +E SNP F FLSP + +H +Y+ +L+
Sbjct:   39 GYVARNGNVFEDRIRDKESSNPKFSFLSPNDAYHDFYQWRLS 80          
BLAST of mRNA_E_fasciculatus_S2_contig7321.15514.1 vs. uniprot
Match: A0A218YWG2_9HELO (Uncharacterized protein n=1 Tax=Marssonina coronariae TaxID=503106 RepID=A0A218YWG2_9HELO)

HSP 1 Score: 57.8 bits (138), Expect = 4.670e-5
Identity = 24/45 (53.33%), Postives = 32/45 (71.11%), Query Frame = 0
Query:    3 GYVAKNGQAFEDRVRKREVSNPTFDFLSPTNKFHAYYKRQLALAK 47
            GYVA+NG  FEDR+R++E  NP F FLSP + ++AYY  +L   K
Sbjct:   39 GYVARNGNVFEDRIREKEKHNPKFSFLSPNDSYNAYYLWRLGEIK 83          
BLAST of mRNA_E_fasciculatus_S2_contig7321.15514.1 vs. uniprot
Match: A0A3P7P5R5_DIBLA (Uncharacterized protein (Fragment) n=1 Tax=Dibothriocephalus latus TaxID=60516 RepID=A0A3P7P5R5_DIBLA)

HSP 1 Score: 55.5 bits (132), Expect = 5.160e-5
Identity = 22/49 (44.90%), Postives = 38/49 (77.55%), Query Frame = 0
Query:    4 YVAKNGQAFEDRVRKREVSNPTFDFLSPTNKFHAYYKRQLA-LAKGEPV 51
            +VA+NG  FE R+R+ E++NP F+FL+P++ +HAYY+ ++   A+G+ V
Sbjct:   36 FVARNGPDFESRIRQNEINNPKFNFLTPSDPYHAYYQHKVRDFAEGKAV 84          
BLAST of mRNA_E_fasciculatus_S2_contig7321.15514.1 vs. uniprot
Match: K1Q318_CRAGI (Splicing factor 3 subunit 1 n=3 Tax=Crassostrea TaxID=6564 RepID=K1Q318_CRAGI)

HSP 1 Score: 57.4 bits (137), Expect = 7.070e-5
Identity = 27/58 (46.55%), Postives = 40/58 (68.97%), Query Frame = 0
Query:    4 YVAKNGQAFEDRVRKREVSNPTFDFLSPTNKFHAYYK---RQLALAKG-EPVPPAPRQ 57
            +VA+NG  FE R+RK E++N  F+FL+P++ +HAYY+   R+    +G EPV P P Q
Sbjct:   49 FVARNGPEFESRIRKNEMNNSKFNFLNPSDPYHAYYQHKVREFKEGRGQEPVAPKPSQ 106          
BLAST of mRNA_E_fasciculatus_S2_contig7321.15514.1 vs. uniprot
Match: A0A2V1B8Q1_9HELO (Surp module n=8 Tax=leotiomyceta TaxID=716546 RepID=A0A2V1B8Q1_9HELO)

HSP 1 Score: 57.0 bits (136), Expect = 7.620e-5
Identity = 23/41 (56.10%), Postives = 31/41 (75.61%), Query Frame = 0
Query:    3 GYVAKNGQAFEDRVRKREVSNPTFDFLSPTNKFHAYYKRQL 43
            GYVA+NG  FEDR+R++E  NP F FLSP + ++AYY  +L
Sbjct:   39 GYVARNGNVFEDRIREKEKHNPKFSFLSPNDSYNAYYLWRL 79          
BLAST of mRNA_E_fasciculatus_S2_contig7321.15514.1 vs. uniprot
Match: UPI0005216433 (splicing factor 3A subunit 1 n=1 Tax=Dryobates pubescens TaxID=118200 RepID=UPI0005216433)

HSP 1 Score: 57.0 bits (136), Expect = 9.500e-5
Identity = 21/44 (47.73%), Postives = 35/44 (79.55%), Query Frame = 0
Query:    4 YVAKNGQAFEDRVRKREVSNPTFDFLSPTNKFHAYYKRQLALAK 47
            +VA+NG  FE R+R+ E++NP F+FL+PT+ +HAYY+ +++  K
Sbjct:   88 FVARNGPEFEARIRQNEINNPKFNFLNPTDPYHAYYRHKVSEFK 131          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7321.15514.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A6H5L7V8_9PHAE5.760e-9574.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FJ62_ECTSI1.110e-8674.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7J7IYS6_BUGNE1.420e-543.64Uncharacterized protein n=1 Tax=Bugula neritina Ta... [more]
UPI000C7581723.070e-546.94splicing factor 3A subunit 1-like isoform X1 n=2 T... [more]
A0A8K0SGF4_9HYPO3.360e-554.76Pre-mRNA splicing factor PRP21 like protein-domain... [more]
A0A218YWG2_9HELO4.670e-553.33Uncharacterized protein n=1 Tax=Marssonina coronar... [more]
A0A3P7P5R5_DIBLA5.160e-544.90Uncharacterized protein (Fragment) n=1 Tax=Dibothr... [more]
K1Q318_CRAGI7.070e-546.55Splicing factor 3 subunit 1 n=3 Tax=Crassostrea Ta... [more]
A0A2V1B8Q1_9HELO7.620e-556.10Surp module n=8 Tax=leotiomyceta TaxID=716546 RepI... [more]
UPI00052164339.500e-547.73splicing factor 3A subunit 1 n=1 Tax=Dryobates pub... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000061SWAP/SurpSMARTSM00648surpneu2coord: 1..48
e-value: 2.2E-9
score: 47.2
IPR000061SWAP/SurpPFAMPF01805Surpcoord: 3..42
e-value: 4.6E-13
score: 48.9
IPR000061SWAP/SurpPROSITEPS50128SURPcoord: 1..39
score: 15.113
IPR035967SWAP/Surp superfamilyGENE3D1.10.10.790coord: 1..48
e-value: 6.1E-14
score: 53.5
IPR035967SWAP/Surp superfamilySUPERFAMILY109905Surp module (SWAP domain)coord: 2..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7321contigE_fasciculatus_S2_contig7321:1719..4057 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7321.15514.1mRNA_E_fasciculatus_S2_contig7321.15514.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig7321 1309..4823 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig7321.15514.1 ID=prot_E_fasciculatus_S2_contig7321.15514.1|Name=mRNA_E_fasciculatus_S2_contig7321.15514.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=600bp
MVGYVAKNGQAFEDRVRKREVSNPTFDFLSPTNKFHAYYKRQLALAKGEP
VPPAPRQGDKGGAPATGGSSNSDVGRAPGAVPGSSASQRQSSRDTASSTA
GSVGGTPGGVPVVGGMEGESAKPGASASQENGSAASVSLTARTKRRRSQD
ESDESGGSNGNSADGDNAASTAAAPVDASSVAVNLREKLGAKLGIALSTI
NDRRGKADDGSQEAEEDEKGENDPTPGSASGSRGRVSAEGKVGESASQPE
PEGAEGGRRADDEETRRANRLKRMRLMSGHYKLAVLEHSSEKQQQQQQQD
GAAAVASTEPAPGAVSAAGGGGDGVGVTTTPRRTACLTWTTPAAVATRKG
EARATTTKLPAAASRRSPPPARGRHLVAVRQNGVIVHRGPVVPTAEAAEK
TGPIPGTAHGAAGDQELKTAGAGEGRGSAGAARAIARAGGTRMRLLVEKT
GGMHGGAEAAAAVEAGHAVAVSARPAAHQAEATGIGHRGPEIAQAENGAT
TAREETEARPAVEARLRLLGSRRAVAAGGNGTVGRGGTAERGPARSREVI
VRPAAGGVRRTLARRVGVRRDPTGGAGAGTEGRAGSGLAATSDPEGDRL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035967SWAP/Surp_sf
IPR000061Surp