prot_E_fasciculatus_S2_contig7117.15294.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E_fasciculatus_S2_contig7117.15294.1
Unique Name	prot_E_fasciculatus_S2_contig7117.15294.1
Type	polypeptide
Organism	Ectocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length	399

Homology

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BLAST of mRNA_E_fasciculatus_S2_contig7117.15294.1 vs. uniprot
Match: D8LR50_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR50_ECTSI)

HSP 1 Score: 365 bits (938), Expect = 6.180e-119
Identity = 268/409 (65.53%), Postives = 279/409 (68.22%), Query Frame = 0

Query:    1 PLHAARHCRSFAFANAKDWDSYRREQGLITAGVERMEGRTQYYGGYKARTIFRTSALSGAAADLTRILNLLSRAEGMRGGILATAAGTTPGDVTXXXXXXXXXXTGPEELELLRQAVEMQDALGYDEPPQLPVPTRLFLASALLRGVDVGGXXXXXXXXXXVDGSSIDDGDTATTMAPVSXXXXXXXXXXXXXXXXXXXEEAEAVLLDLDAEYPNMGRTLLGLWRCREALGKHDEALESRELFLASWGPYSEVWLEDSAHVGGVLGGVDGS-----------GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGGGVFRAVLPRGRGDSEAVGAEAASIVAQGRSQGRRVGGRSDNCSSTRGHGYRAIGEGSGDDGSVVQIDGSVL 398
            PL A R  RSFAFANAKDWDSYRREQG ITAGVE MEGRTQYYG Y A             A+LTRIL+LLSRAEG+RGGI  +AAGTTPGDVT           GPEELELLRQAVEMQDALGYDEPP+LPVPTRLFLA+ALLRGVD G XXXXXXXXXX  GSS+ DGDTA       XXXXXXXXXXXXXXXXXXXEEAEAVLL++DAEYP MGRTLLGLWRCREALGKHDEAL  RE FLASWGPYSEVWLEDSAHVGGVLG                G                                         XXXXXXXXXXX GGGVFRA+LPRG G S A GAEA SIV  GR QGR           + GHGYR IGEGSGDDGSVVQIDG VL
Sbjct:  173 PLAAYRFARSFAFANAKDWDSYRREQGFITAGVEIMEGRTQYYGVYNA-------------AELTRILDLLSRAEGLRGGIHVSAAGTTPGDVTTAAT------AGPEELELLRQAVEMQDALGYDEPPRLPVPTRLFLAAALLRGVDSGXXXXXXXXXXX--GSSVGDGDTAXXXXXXXXXXXXXXXXXXXXXXXXXXEEAEAVLLEVDAEYPGMGRTLLGLWRCREALGKHDEALALRERFLASWGPYSEVWLEDSAHVGGVLGXXXXXXXXXXXXXPVVGAGLDEEEGLHHHAPQGVDGKDYRVLAGLTVAAAALSLSAFLXXXXXXXXXXXXGGGVFRALLPRGAGGS-AAGAEAVSIVVPGRGQGRXXXXXXXXXXXSGGHGYRTIGEGSGDDGSVVQIDGGVL 559

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BLAST of mRNA_E_fasciculatus_S2_contig7117.15294.1 vs. uniprot
Match: A0A6H5KN81_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN81_9PHAE)

HSP 1 Score: 306 bits (785), Expect = 3.080e-93
Identity = 233/410 (56.83%), Postives = 244/410 (59.51%), Query Frame = 0

Query:    1 PLHAARHCRSFAFANAKDWDSYRREQGLITAGVERMEGRTQYYGGYKARTIFRTSALSGAAADLTRILNLLSRAEGMRGGILATAAGTTPGDVTXXXXXXXXXXTGPEELELLRQAVEMQDALGYDEPPQLPVPTRLFLASALLRGVDVGGXXXXXXXXXXVDGSSIDDGDTATTMAPVSXXXXXXXXXXXXXXXXXXXEE-AEAVLLDLDAEYPNMGRTLLGLWRCREALGKHDEALESRELFLASWGPYSEVWLEDSAHVGGVLGGVDGS-----------GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGGGVFRAVLPRGRGDSEAVGAEAASIVAQGRSQGRRVGGRSDNCSSTRGHGYRAIGEGSGDDGSVVQIDGSVL 398
            P+ A    RSFAFANAKDWDSYRREQGLITAGVE ME RT+YYG Y A             A+LTRIL+LLSRAEG+RGGI  T+AGTTPGDV            GPEELELLRQAVEMQDALGYDEPPQLPVPTRLFLA+ALLRGVD G           VDGS               XXXXXXXXXXXXXXXXXXX   AEAVLL++DAEYP MGRTLLGLWRCREALGKHDEAL  RE FLASWGPYSEVWLEDSAHVGGVLG                G                                         XXXXXXXXXXX GGGVFRA+LPRG G S                                   YRAIGEGSGDDGSVVQIDG +L
Sbjct:  437 PVAAYHFARSFAFANAKDWDSYRREQGLITAGVEIMESRTEYYGVYNA-------------AELTRILDLLSRAEGLRGGIHGTSAGTTPGDVATGATPPGAAAAGPEELELLRQAVEMQDALGYDEPPQLPVPTRLFLAAALLRGVDSG--VGGVGIEGGVDGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEAVLLEVDAEYPGMGRTLLGLWRCREALGKHDEALALRERFLASWGPYSEVWLEDSAHVGGVLGXXXXXXXXXXXXXXXXGAGLDEEGGLHHHAPQGVDGKDYHVLAGLTVAAAALSLSAFLXXXXXXXXXXXXGGGVFRALLPRGPGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-YRAIGEGSGDDGSVVQIDGGIL 830

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig7117.15294.1 vs. uniprot

BLAST of mRNA_E_fasciculatus_S2_contig7117.15294.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LR50_ECTSI	6.180e-119	65.53	TPR repeat-containing protein n=1 Tax=Ectocarpus s...	[more]
A0A6H5KN81_9PHAE	3.080e-93	56.83	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 315..398
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 293..314
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..292
None	No IPR available	TMHMM	TMhelix		coord: 292..314

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E_fasciculatus_S2_contig7117	contig	E_fasciculatus_S2_contig7117:5826..7580 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-07-07

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E_fasciculatus_S2_contig7117.15294.1	mRNA_E_fasciculatus_S2_contig7117.15294.1	Ectocarpus fasciculatus EfasUO2	mRNA	E_fasciculatus_S2_contig7117 5826..7580 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E_fasciculatus_S2_contig7117.15294.1 ID=prot_E_fasciculatus_S2_contig7117.15294.1|Name=mRNA_E_fasciculatus_S2_contig7117.15294.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=399bp
PLHAARHCRSFAFANAKDWDSYRREQGLITAGVERMEGRTQYYGGYKART
IFRTSALSGAAADLTRILNLLSRAEGMRGGILATAAGTTPGDVTTAAAAA
AAAATGPEELELLRQAVEMQDALGYDEPPQLPVPTRLFLASALLRGVDVG
GGGGGSGGERGVDGSSIDDGDTATTMAPVSAAIPPTLTTPTTTAAAAAVE
EAEAVLLDLDAEYPNMGRTLLGLWRCREALGKHDEALESRELFLASWGPY
SEVWLEDSAHVGGVLGGVDGSGGGGGSVVEEGLDEERGYHATAGFFLAAL
TVAAAALSLSAFLLAAARRRGGGSCGGGVFRAVLPRGRGDSEAVGAEAAS
IVAQGRSQGRRVGGRSDNCSSTRGHGYRAIGEGSGDDGSVVQIDGSVL*