prot_E_fasciculatus_S2_contig7098.15269.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E_fasciculatus_S2_contig7098.15269.1
Unique Name	prot_E_fasciculatus_S2_contig7098.15269.1
Type	polypeptide
Organism	Ectocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length	241

Homology

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BLAST of mRNA_E_fasciculatus_S2_contig7098.15269.1 vs. uniprot
Match: D8LMQ5_ECTSI (Pol1-like DNA polymerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMQ5_ECTSI)

HSP 1 Score: 234 bits (597), Expect = 4.610e-67
Identity = 155/208 (74.52%), Postives = 161/208 (77.40%), Query Frame = 0

Query:    1 MCQQASALPQTAEH-HPTLTYAEEQXXXXXXXXX---------------------QQEGRPAVGAGDVTSSPAAAVRNGMQNGLWVQNDGAESGAVVAEWQHREGEVEGAANGWAPASFAVEPRREEVPAAPAVLADELPTLREDAAGLEKKEEAEVVVEAEAVDYSKLTVPKLKDILRARKLKVSGRKAELIERINQVQHGQTSHCV 186
            MCQQASALPQTAEH +P  TY EEQXXXXXXXXX                     QQEGRPAVGAGDVTS PAAAVRNGMQNGLWVQN GAESGAVVAEWQ REGE EG ANGWA ASFAV+PR EEV AA AVLADEL T REDA GLEKKEE EVV E E VDYSKLTVP+LK ILRA+KLKVSG+K ELIER+NQVQH QT   V
Sbjct:  110 MCQQASALPQTAEHLYPASTYPEEQXXXXXXXXXXXXQPRGVGYENARRAAGVERQQEGRPAVGAGDVTS-PAAAVRNGMQNGLWVQNGGAESGAVVAEWQQREGEAEGVANGWALASFAVDPRPEEVRAASAVLADELSTFREDA-GLEKKEE-EVVEEVEVVDYSKLTVPELKGILRAKKLKVSGKKEELIERLNQVQHRQTGAVV 314

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BLAST of mRNA_E_fasciculatus_S2_contig7098.15269.1 vs. uniprot
Match: A0A6H5K9D2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9D2_9PHAE)

HSP 1 Score: 229 bits (584), Expect = 2.610e-65
Identity = 145/205 (70.73%), Postives = 150/205 (73.17%), Query Frame = 0

Query:    1 MCQQASALPQTAEH-HPTLTYAEEQXXXXXXXXX---------------------QQEGRPAVGAGDVTSSPAAAVRNGMQNGLWVQNDGAESGAVVAEWQHREGEVEGAANGWAPASFAVEPRREEVPAAPAVLADELPTLREDAAGLEKKEEAEVVVEAEAVDYSKLTVPKLKDILRARKLKVSGRKAELIERINQVQHGQTS 183
            MCQQASALPQTAEH +P  TY EE+       XX                     QQEGRPAVGAGDVTSS AAAVRNGMQNGLWVQN  AESGAVVAEWQ REG VEGA NGWAPASFAVEPRREE+PAA AVLADEL T REDA GL KKEE E   E E VDYSKLTVPKLKDILRA+KLKVSGRK ELIER+NQ     TS
Sbjct:  336 MCQQASALPQTAEHMYPASTYPEEEQHGVGARXXXXXXTRGMGHEKARRAAAVERQQEGRPAVGAGDVTSS-AAAVRNGMQNGLWVQNSDAESGAVVAEWQQREGGVEGAVNGWAPASFAVEPRREEMPAASAVLADELSTFREDA-GLAKKEE-EGAEEVEVVDYSKLTVPKLKDILRAKKLKVSGRKEELIERLNQADPDTTS 537

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig7098.15269.1 vs. uniprot

BLAST of mRNA_E_fasciculatus_S2_contig7098.15269.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LMQ5_ECTSI	4.610e-67	74.52	Pol1-like DNA polymerase n=1 Tax=Ectocarpus silicu...	[more]
A0A6H5K9D2_9PHAE	2.610e-65	70.73	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003034	SAP domain	SMART	SM00513	sap_9	coord: 144..178 e-value: 1.2E-8 score: 44.7
IPR003034	SAP domain	PFAM	PF02037	SAP	coord: 144..176 e-value: 1.1E-13 score: 50.6
IPR003034	SAP domain	PROSITE	PS50800	SAP	coord: 144..178 score: 11.285
IPR036361	SAP domain superfamily	GENE3D	1.10.720.30		coord: 141..184 e-value: 7.5E-15 score: 56.3
IPR036361	SAP domain superfamily	SUPERFAMILY	68906	SAP domain	coord: 140..176
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 193..217
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 218..240
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..192
None	No IPR available	TMHMM	TMhelix		coord: 193..215

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E_fasciculatus_S2_contig7098	contig	E_fasciculatus_S2_contig7098:5316..6618 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-07-07

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E_fasciculatus_S2_contig7098.15269.1	mRNA_E_fasciculatus_S2_contig7098.15269.1	Ectocarpus fasciculatus EfasUO2	mRNA	E_fasciculatus_S2_contig7098 381..6822 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E_fasciculatus_S2_contig7098.15269.1 ID=prot_E_fasciculatus_S2_contig7098.15269.1|Name=mRNA_E_fasciculatus_S2_contig7098.15269.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=241bp
MCQQASALPQTAEHHPTLTYAEEQQHGGRRRQRQQEGRPAVGAGDVTSSP
AAAVRNGMQNGLWVQNDGAESGAVVAEWQHREGEVEGAANGWAPASFAVE
PRREEVPAAPAVLADELPTLREDAAGLEKKEEAEVVVEAEAVDYSKLTVP
KLKDILRARKLKVSGRKAELIERINQVQHGQTSHCVFTPSFCLFVFAAGT
AVSWMFLFSCAILFPLASISALDVMSSPQHVSCKNPHNSV*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036361	SAP_dom_sf
IPR003034	SAP_dom