prot_E_fasciculatus_S2_contig6969.15107.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig6969.15107.1
Unique Nameprot_E_fasciculatus_S2_contig6969.15107.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length54
Homology
BLAST of mRNA_E_fasciculatus_S2_contig6969.15107.1 vs. uniprot
Match: A0A6H5JYH2_9PHAE (RanBD1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYH2_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 2.880e-18
Identity = 40/41 (97.56%), Postives = 41/41 (100.00%), Query Frame = 0
Query:    1 MDPSEVINGEELEECTHKARGKLFRLVSKEWAEMGIGNLKV 41
            MDPSEVINGEELEECTHKARGKLFRLV+KEWAEMGIGNLKV
Sbjct:  400 MDPSEVINGEELEECTHKARGKLFRLVNKEWAEMGIGNLKV 440          
BLAST of mRNA_E_fasciculatus_S2_contig6969.15107.1 vs. uniprot
Match: A0A423TF12_PENVA (Putative E3 SUMO-protein ligase RanBP2-like isoform X1 n=2 Tax=Penaeus vannamei TaxID=6689 RepID=A0A423TF12_PENVA)

HSP 1 Score: 48.5 bits (114), Expect = 4.320e-5
Identity = 21/40 (52.50%), Postives = 28/40 (70.00%), Query Frame = 0
Query:    2 DPSEVINGEELEECTHKARGKLFRLVSKEWAEMGIGNLKV 41
            D  +V+ GEE E C +  R KLFRL+S EW E GIG++K+
Sbjct: 1947 DKVDVVTGEEEETCLYSHRSKLFRLISGEWKERGIGDVKI 1986          
BLAST of mRNA_E_fasciculatus_S2_contig6969.15107.1 vs. uniprot
Match: UPI000F6639C6 (LOW QUALITY PROTEIN: E3 SUMO-protein ligase RanBP2-like n=19 Tax=Penaeus TaxID=133894 RepID=UPI000F6639C6)

HSP 1 Score: 48.5 bits (114), Expect = 4.320e-5
Identity = 21/40 (52.50%), Postives = 28/40 (70.00%), Query Frame = 0
Query:    2 DPSEVINGEELEECTHKARGKLFRLVSKEWAEMGIGNLKV 41
            D  +V+ GEE E C +  R KLFRL+S EW E GIG++K+
Sbjct: 2346 DKVDVVTGEEEETCLYSHRSKLFRLISGEWKERGIGDVKI 2385          
BLAST of mRNA_E_fasciculatus_S2_contig6969.15107.1 vs. uniprot
Match: UPI001C70E815 (E3 SUMO-protein ligase RanBP2-like isoform X1 n=14 Tax=Penaeus japonicus TaxID=27405 RepID=UPI001C70E815)

HSP 1 Score: 48.1 bits (113), Expect = 5.920e-5
Identity = 22/40 (55.00%), Postives = 28/40 (70.00%), Query Frame = 0
Query:    2 DPSEVINGEELEECTHKARGKLFRLVSKEWAEMGIGNLKV 41
            D  +V+ GEE E C +  R KLFRLVS EW E GIG++K+
Sbjct: 2179 DKVDVVTGEEEESCLYSHRCKLFRLVSGEWKERGIGDVKI 2218          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig6969.15107.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JYH2_9PHAE2.880e-1897.56RanBD1 domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A423TF12_PENVA4.320e-552.50Putative E3 SUMO-protein ligase RanBP2-like isofor... [more]
UPI000F6639C64.320e-552.50LOW QUALITY PROTEIN: E3 SUMO-protein ligase RanBP2... [more]
UPI001C70E8155.920e-555.00E3 SUMO-protein ligase RanBP2-like isoform X1 n=14... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 1..52
e-value: 8.7E-11
score: 44.0
IPR000156Ran binding domainPFAMPF00638Ran_BP1coord: 5..44
e-value: 1.5E-6
score: 28.5
IPR000156Ran binding domainPROSITEPS50196RANBD1coord: 1..54
score: 9.642
NoneNo IPR availableSUPERFAMILY50729PH domain-likecoord: 2..44

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig6969contigE_fasciculatus_S2_contig6969:672..833 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig6969.15107.1mRNA_E_fasciculatus_S2_contig6969.15107.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig6969 672..842 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig6969.15107.1 ID=prot_E_fasciculatus_S2_contig6969.15107.1|Name=mRNA_E_fasciculatus_S2_contig6969.15107.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=54bp
MDPSEVINGEELEECTHKARGKLFRLVSKEWAEMGIGNLKVRAEEGGRRR
AWRR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000156Ran_bind_dom
IPR011993PH-like_dom_sf