prot_E_fasciculatus_S2_contig692.15056.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig692.15056.1
Unique Nameprot_E_fasciculatus_S2_contig692.15056.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length306
Homology
BLAST of mRNA_E_fasciculatus_S2_contig692.15056.1 vs. uniprot
Match: A0A6H5KUI3_9PHAE (XPA_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUI3_9PHAE)

HSP 1 Score: 294 bits (752), Expect = 9.950e-96
Identity = 268/309 (86.73%), Postives = 275/309 (89.00%), Query Frame = 0
Query:    1 MNLTDEQRRRMEENRARARARLREKRETQVPAASAINGGETGASPPTPTSGRERTTQDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----AVACEGCGGEQDDARMDKELLEGFGISVCRTCKLSREEFQYVSTKDVKDTYLLPQGTIAVLKFVERDNPHHSSWTKMKLYLRREVAEYSFKRWGSEDGLAAERRRRESLKYDRSLARTKGIFKRSRSETEGDGITGGFL 305
            MNLTDEQRRRMEENRARARARLREKRETQ+PAAS I+GGET ASPP PTSG E   QDG      XXXXXXXX    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        XXXXX    AVACEGCGGEQDDARMDKELLE FGISVCRTCK+SREEFQYV+TKDVKDTYLLPQGTIAVLKFVERDNPHHSSWTKMKLYLRREV  YS++RWGSEDGLAAERRRRESLKYDRSLARTKGIFKRSRSETE DG+ GGFL
Sbjct:    1 MNLTDEQRRRMEENRARARARLREKRETQIPAASEIDGGETRASPP-PTSGPE-PKQDGGERAGSXXXXXXXXAQPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAVGNISSXXXXXXXXAAVACEGCGGEQDDARMDKELLEAFGISVCRTCKMSREEFQYVTTKDVKDTYLLPQGTIAVLKFVERDNPHHSSWTKMKLYLRREVVAYSYRRWGSEDGLAAERRRRESLKYDRSLARTKGIFKRSRSETEDDGVVGGFL 307          
BLAST of mRNA_E_fasciculatus_S2_contig692.15056.1 vs. uniprot
Match: D7FX65_ECTSI (XPA_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX65_ECTSI)

HSP 1 Score: 237 bits (605), Expect = 4.130e-76
Identity = 116/124 (93.55%), Postives = 119/124 (95.97%), Query Frame = 0
Query:  182 MDKELLEGFGISVCRTCKLSREEFQYVSTKDVKDTYLLPQGTIAVLKFVERDNPHHSSWTKMKLYLRREVAEYSFKRWGSEDGLAAERRRRESLKYDRSLARTKGIFKRSRSETEGDGITGGFL 305
            MDKELLE FGISVCRTCK+SREEFQYVSTKDVKDTYLLPQGTIAVLKFVERDNPHHSSWTKMKLYLRREV  YS+KRWGSEDGLAAERRRRESLKYDRSLARTKGIFKRSR ETE DG+TGGFL
Sbjct:    1 MDKELLEAFGISVCRTCKMSREEFQYVSTKDVKDTYLLPQGTIAVLKFVERDNPHHSSWTKMKLYLRREVVAYSYKRWGSEDGLAAERRRRESLKYDRSLARTKGIFKRSRPETEDDGVTGGFL 124          
BLAST of mRNA_E_fasciculatus_S2_contig692.15056.1 vs. uniprot
Match: A0A835ZE73_9STRA (XPA_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE73_9STRA)

HSP 1 Score: 123 bits (309), Expect = 1.830e-30
Identity = 56/122 (45.90%), Postives = 87/122 (71.31%), Query Frame = 0
Query:  170 CEGCGG-EQDDAR--MDKELLEGFGISVCRTCKLSREEFQYVSTKDVKDTYLLPQGTIAVLKFVERDNPHHSSWTKMKLYLRREVAEYSFKRWGSEDGLAAERRRRESLKYDRSLARTKGIF 288
            CE CG  + DD R  +D++LLE F ++VCR CK S+E ++ ++  DV+  +LLP+GTI VLK+VER+NP +  WT M+LYL ++   ++ KRW + + L  ER+RR++ K++ S+ RTKG+F
Sbjct:   64 CESCGARDTDDPRGTLDRKLLEAFDVAVCRNCKDSKEAYELMTKADVQKLFLLPEGTIRVLKYVERENPRNKGWTPMRLYLHKDARVWALKRWSTVEALEEERKRRDAKKWEESVKRTKGVF 185          
BLAST of mRNA_E_fasciculatus_S2_contig692.15056.1 vs. uniprot
Match: A0A7S3XXW5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXW5_HETAK)

HSP 1 Score: 119 bits (298), Expect = 8.200e-30
Identity = 51/129 (39.53%), Postives = 87/129 (67.44%), Query Frame = 0
Query:  169 ACEGCGGEQDDARMDKELLEGFGISVCRTCKLSREEFQYVSTKDVKDTYLLPQGTIAVLKFVERDNPHHSSWTKMKLYLRREVAEYSFKRWGSEDGLAAERRRRESLKYDRSLARTKGIFKRSRSETEG 297
            +CE C   ++D+ +++   + F +SVC  CK+S ++++ ++  +V   + LP+GTI VL F+E++NP H +WT MKL+L+++V +YS  RWG  +GL  ERRRR+  K   +L RT G+ K+S++  +G
Sbjct:    7 SCEAC---REDSELNETFYQRFQVSVCNQCKISNDDYKLITKAEVVQMFCLPEGTIQVLDFIEKENPRHGTWTPMKLFLQKQVKKYSHDRWGGLEGLLQERRRRDEKKLKNALKRTSGLLKKSKAHHQG 132          
BLAST of mRNA_E_fasciculatus_S2_contig692.15056.1 vs. uniprot
Match: A0A6U3U265_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6U3U265_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 2.650e-15
Identity = 48/112 (42.86%), Postives = 64/112 (57.14%), Query Frame = 0
Query:  175 GEQDDAR-MDKELLEGFGISVCRTCKLSREEFQYVSTKDVKDTYLLPQGTIAVLKFVERDNPHHSSWTKMKLYLRREVAEYSFKRWGSEDGLAAERRRRESLKYDRSLARTK 285
            GE++D    D E LE F           R+   YVS  + + TY LP+GTI VL FVERDNPH   ++KMKLY R EV   + KR+G + GL  ER +R+  +Y++ L   K
Sbjct:   76 GEREDCENSDDESLEEF----------ERDASAYVSKTEAQKTYCLPKGTIDVLSFVERDNPHQRGFSKMKLYSRAEVRRRARKRFGGKSGLITEREKRKMKRYEQELKEVK 177          
BLAST of mRNA_E_fasciculatus_S2_contig692.15056.1 vs. uniprot
Match: A0A7S3PXE3_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PXE3_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 2.930e-15
Identity = 44/117 (37.61%), Postives = 65/117 (55.56%), Query Frame = 0
Query:  176 EQDDARMDKELLEGFGISVCRTCKLSREEFQYVSTKDVKDTYLLPQGTIAVLKFVERDNPHHSSWTKMKLYLRREVAEYSFKRWGSEDGLAAERRRRESLKYDRSLARTKGIFKRSR 292
            E++D  ++   LE F I             QYV+ +D K  Y LP GT+ V ++ E+DNP  S W KMKLY R E+   +  RWG  +GL  ERRRRE+ + ++ +A    +FK+ +
Sbjct:   67 EEEDENVE---LEDFEIGAS----------QYVTKQDAKGKYCLPDGTLEVCEYTEKDNPRQSKWNKMKLYNRSEIRRRARDRWGGLEGLQEERRRRENKRSEKDMAEGYRLFKKQK 170          
BLAST of mRNA_E_fasciculatus_S2_contig692.15056.1 vs. uniprot
Match: A0A4D9D9F3_9STRA (XPA_C domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D9F3_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 3.880e-15
Identity = 44/130 (33.85%), Postives = 76/130 (58.46%), Query Frame = 0
Query:  168 VACEGCGGEQDDARMDKELLEGFGISVCRTCKLSREEFQYVSTK-DVKDTYLLPQGTIAVLKFVERDNPHHSSWTKMKLYLRREVAEYSFKRWGSEDGLAAERRRRESLKYDRSLARTKGIFKRSRSETE 296
            ++CE CG       +D    + F I+VC  CK + EE   + TK D    +LL +GT+ V+ ++ER+NP ++ + KMKLY RR +   +++RW   +GLA ER RR   +Y+ ++ +T  +F ++  + +
Sbjct:  102 LSCEVCG----SGLVDPMYHDVFRITVCTPCKNNNEEEYGLVTKGDAVAEFLLQEGTMRVMPYLERNNPRNTKYQKMKLYCRRLLRAKAYERWDGPEGLAEERNRRRERRYESAIDKTLNVFTKTTKKAK 227          
BLAST of mRNA_E_fasciculatus_S2_contig692.15056.1 vs. uniprot
Match: A0A7S2MFG3_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MFG3_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 6.730e-15
Identity = 44/122 (36.07%), Postives = 65/122 (53.28%), Query Frame = 0
Query:  176 EQDDARMDKELLEGFGISVCRTCKLSREEFQ-----YVSTKDVKDTYLLPQGTIAVLKFVERDNPHHSSWTKMKLYLRREVAEYSFKRWGSEDGLAAERRRRESLKYDRSLARTKGIFKRSR 292
            E+D  R D   ++         C    E+F+     +V+  +    Y LP+GT+AV  +VE++NP    W KMKLY R E+   + KR+G  DGL  ER +R   ++++ L  TK IFKR R
Sbjct:   73 EEDKQRSDSCHIKNNKEENNEECTDDLEDFERDVGPHVTKSEAMQMYCLPEGTLAVCSYVEKENPRRKGWNKMKLYNRAEIRRRARKRYGGLDGLIEERAKRSMKRFEKDLEETKDIFKRKR 194          
BLAST of mRNA_E_fasciculatus_S2_contig692.15056.1 vs. uniprot
Match: A0A7S2XPB6_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XPB6_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 1.020e-14
Identity = 46/118 (38.98%), Postives = 62/118 (52.54%), Query Frame = 0
Query:  174 GGEQDDARMDKELLEGFGISVCRTCKLSREEFQYVSTKDVKDTYLLPQGTIAVLKFVERDNPHHSSWTKMKLYLRREVAEYSFKRWGSEDGLAAERRRRESLKYDRSLARTKGIFKRS 291
            GG +D    D   LE F I              +V+ ++   TY LP+GT+AV  FVE++NP    W+ MKLY R E+   +  R G  +GLAAER+RR   +    L  TK IFKR+
Sbjct:   76 GGNEDGGEKDDIELEDFEIGAST----------FVTKREAMQTYCLPEGTMAVCSFVEKENPRQKGWSSMKLYDRAEIRRRARDRHGGIEGLAAERKRRAEKRLRNDLETTKDIFKRN 183          
BLAST of mRNA_E_fasciculatus_S2_contig692.15056.1 vs. uniprot
Match: A0A7S1E1A0_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1E1A0_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 1.330e-14
Identity = 39/82 (47.56%), Postives = 54/82 (65.85%), Query Frame = 0
Query:  208 VSTKDVKDTYLLPQGTIAVLKFVERDNPHHSSWTKMKLYLRREVAEYSFKRWGSEDGLAAERRRRESLKYDRSLARTKGIFK 289
            V+ K+ K+ Y LP+GT+AV  FVE++NPH   W KMKLY R E+   + KR+G  +GL  ER  R   K+++ L +TK IFK
Sbjct:   71 VTKKEAKERYCLPEGTLAVCSFVEKENPHRKGWNKMKLYERFEIRLRARKRYGGLEGLIEERDERARKKFEKDLDKTKHIFK 152          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig692.15056.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KUI3_9PHAE9.950e-9686.73XPA_C domain-containing protein n=1 Tax=Ectocarpus... [more]
D7FX65_ECTSI4.130e-7693.55XPA_C domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A835ZE73_9STRA1.830e-3045.90XPA_C domain-containing protein n=1 Tax=Tribonema ... [more]
A0A7S3XXW5_HETAK8.200e-3039.53Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6U3U265_9STRA2.650e-1542.86Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S3PXE3_9STRA2.930e-1537.61Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A4D9D9F3_9STRA3.880e-1533.85XPA_C domain-containing protein n=2 Tax=Monodopsid... [more]
A0A7S2MFG3_9STRA6.730e-1536.07Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S2XPB6_9STRA1.020e-1438.98Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S1E1A0_9STRA1.330e-1447.56Hypothetical protein n=1 Tax=Thalassionema nitzsch... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1..28
IPR022656XPA, C-terminalPFAMPF05181XPA_Ccoord: 212..251
e-value: 6.4E-11
score: 42.0
IPR037129XPA domain superfamilyGENE3D3.90.530.10coord: 164..273
e-value: 4.1E-26
score: 92.9
IPR000465XPAPANTHERPTHR10142DNA REPAIR PROTEIN COMPLEMENTING XP-A CELLScoord: 3..289
IPR009061Putative DNA-binding domain superfamilySUPERFAMILY46955Putative DNA-binding domaincoord: 204..273

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig692contigE_fasciculatus_S2_contig692:4745..7869 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig692.15056.1mRNA_E_fasciculatus_S2_contig692.15056.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig692 4728..8406 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig692.15056.1 ID=prot_E_fasciculatus_S2_contig692.15056.1|Name=mRNA_E_fasciculatus_S2_contig692.15056.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=306bp
MNLTDEQRRRMEENRARARARLREKRETQVPAASAINGGETGASPPTPTS
GRERTTQDGGEKAGGASGAGGADAQLEEDQQGPSPQQQPTTPAAAAAVAS
SSSSSLSAAAPPSAAAASAAVTSLANGSTRCGGGGARGTRAGGGGGDKGR
AAGNSSRSDGGGAGAAAVACEGCGGEQDDARMDKELLEGFGISVCRTCKL
SREEFQYVSTKDVKDTYLLPQGTIAVLKFVERDNPHHSSWTKMKLYLRRE
VAEYSFKRWGSEDGLAAERRRRESLKYDRSLARTKGIFKRSRSETEGDGI
TGGFL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009061DNA-bd_dom_put_sf
IPR000465XPA
IPR037129XPA_sf
IPR022656XPA_C