prot_E_fasciculatus_S2_contig69.15031.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig69.15031.1
Unique Nameprot_E_fasciculatus_S2_contig69.15031.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length210
Homology
BLAST of mRNA_E_fasciculatus_S2_contig69.15031.1 vs. uniprot
Match: D7FW65_ECTSI (SNRNP27 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW65_ECTSI)

HSP 1 Score: 255 bits (652), Expect = 1.560e-83
Identity = 158/170 (92.94%), Postives = 161/170 (94.71%), Query Frame = 0
Query:   40 RSSRKRSPSRRHFREDGGKDAAXXXXXXXXXXXXVDKSKGTTNETTKPSKQEARRAEAAIKRQKMLEEQQREKDKVKDRLHLIRQMKGDASGEEDAHGSGSDGXXXXXXLTEEQQMMKLMGFAGFDTSKGKGVEDNQRGPAKGAISKHKEREYRQYMNRRGGFNRPLDKM 209
            RSSRKRSP RRHFREDGGKDAAXXXXXXXXXXXX      TT+ET+KPSKQEARRAEAAIKRQKMLEEQQREKDKVKDRLHLIRQMKGDASGEEDA GSGSDG XXXXXLTEEQQMMKLMGFAGFDT+KGKGVEDNQRGPAKGAISKHKEREYRQYMNRRGGFNRPLDKM
Sbjct:   39 RSSRKRSPPRRHFREDGGKDAAXXXXXXXXXXXXXXXXXXTTSETSKPSKQEARRAEAAIKRQKMLEEQQREKDKVKDRLHLIRQMKGDASGEEDALGSGSDGDXXXXXLTEEQQMMKLMGFAGFDTTKGKGVEDNQRGPAKGAISKHKEREYRQYMNRRGGFNRPLDKM 208          
BLAST of mRNA_E_fasciculatus_S2_contig69.15031.1 vs. uniprot
Match: A0A835ZFB0_9STRA (SNRNP27 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFB0_9STRA)

HSP 1 Score: 102 bits (253), Expect = 3.420e-23
Identity = 46/61 (75.41%), Postives = 57/61 (93.44%), Query Frame = 0
Query:  149 LTEEQQMMKLMGFAGFDTSKGKGVEDNQRGPAKGAISKHKEREYRQYMNRRGGFNRPLDKM 209
            ++EEQQMM+++GF GFD++KGK VEDN++G AKGA+SKHKER+YRQYMNRRGGFNRPL KM
Sbjct:  162 MSEEQQMMRMLGFGGFDSTKGKAVEDNKKGAAKGAVSKHKERKYRQYMNRRGGFNRPLAKM 222          
BLAST of mRNA_E_fasciculatus_S2_contig69.15031.1 vs. uniprot
Match: A0A5D6YFD5_9STRA (SNRNP27 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YFD5_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 3.210e-18
Identity = 42/59 (71.19%), Postives = 50/59 (84.75%), Query Frame = 0
Query:  149 LTEEQQMMKLMGFAGFDTSKGKGVEDNQRGPAKGAISKHKEREYRQYMNRRGGFNRPLD 207
            LTEE+QM  LMGF GFD++KGK VEDN +G A GA+ K K+R+YRQYMNRRGGFNRPL+
Sbjct:  196 LTEEEQMQALMGFGGFDSTKGKPVEDNAKGVAAGAVGKEKKRQYRQYMNRRGGFNRPLE 254          
BLAST of mRNA_E_fasciculatus_S2_contig69.15031.1 vs. uniprot
Match: A0A2D4C0V1_PYTIN (U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C0V1_PYTIN)

HSP 1 Score: 87.8 bits (216), Expect = 4.720e-18
Identity = 42/59 (71.19%), Postives = 48/59 (81.36%), Query Frame = 0
Query:  149 LTEEQQMMKLMGFAGFDTSKGKGVEDNQRGPAKGAISKHKEREYRQYMNRRGGFNRPLD 207
            L+EE+QM  L+GF GFD++KGK VEDN  GPA GA  K  +REYRQYMNRRGGFNRPLD
Sbjct:  133 LSEEEQMQMLLGFGGFDSTKGKSVEDNAVGPAAGAARKETKREYRQYMNRRGGFNRPLD 191          
BLAST of mRNA_E_fasciculatus_S2_contig69.15031.1 vs. uniprot
Match: A0A7S2BZL9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BZL9_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 1.100e-17
Identity = 43/85 (50.59%), Postives = 58/85 (68.24%), Query Frame = 0
Query:  116 KDRLHLIRQMKGDASGEEDAHGSGSDGXXXXXXLTEEQQMMKLMGFAGFDTSKGKGVEDNQRGPAKGAISKHKEREYRQYMNRRG 200
            K R+ ++++M+G  S EED       G      +TEE+QM  LMGF GFDT+KGK VEDN+   AKG ++KHK REY+QYMN++G
Sbjct:   74 KSRMEMLKRMQGVESDEEDGXXXXXGGKKSLEGMTEEEQMASLMGFGGFDTTKGKAVEDNKSTAAKGHVAKHKRREYKQYMNKKG 158          
BLAST of mRNA_E_fasciculatus_S2_contig69.15031.1 vs. uniprot
Match: A0A7S3PY04_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PY04_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 1.660e-17
Identity = 40/61 (65.57%), Postives = 51/61 (83.61%), Query Frame = 0
Query:  149 LTEEQQMMKLMGFAGFDTSKGKGVEDNQRGPAKGAISKHKEREYRQYMNRRGGFNRPLDKM 209
            + EE QMMKL+GF GFD++K K VEDN+   A+G+ +K+K R+YRQYMNR+GGFNRPLDKM
Sbjct:  112 MDEEDQMMKLLGFGGFDSTKDKEVEDNKNSLARGSAAKNKARKYRQYMNRKGGFNRPLDKM 172          
BLAST of mRNA_E_fasciculatus_S2_contig69.15031.1 vs. uniprot
Match: K3WFH3_GLOUD (SNRNP27 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WFH3_GLOUD)

HSP 1 Score: 85.9 bits (211), Expect = 6.400e-17
Identity = 41/59 (69.49%), Postives = 47/59 (79.66%), Query Frame = 0
Query:  149 LTEEQQMMKLMGFAGFDTSKGKGVEDNQRGPAKGAISKHKEREYRQYMNRRGGFNRPLD 207
            LTEE+QM  LMGF GFD++KGK VEDN +G A G + K  +R YRQYMNRRGGFNRPLD
Sbjct:  178 LTEEEQMQALMGFGGFDSTKGKVVEDNAKGVATGGVRKESKRAYRQYMNRRGGFNRPLD 236          
BLAST of mRNA_E_fasciculatus_S2_contig69.15031.1 vs. uniprot
Match: A0A482S2G0_9ARCH (DUF1777 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S2G0_9ARCH)

HSP 1 Score: 84.3 bits (207), Expect = 1.070e-16
Identity = 40/59 (67.80%), Postives = 47/59 (79.66%), Query Frame = 0
Query:  151 EEQQMMKLMGFAGFDTSKGKGVEDNQRGPAKGAISKHKEREYRQYMNRRGGFNRPLDKM 209
            EE+ +  LMGFAGF ++KGK VEDN  G A G +SKHK R+YRQYMNR+GGFNRPL KM
Sbjct:  137 EEEDVAMLMGFAGFGSTKGKQVEDNAHGAAAGGVSKHKARKYRQYMNRKGGFNRPLQKM 195          
BLAST of mRNA_E_fasciculatus_S2_contig69.15031.1 vs. uniprot
Match: B8CB98_THAPS (SNRNP27 domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CB98_THAPS)

HSP 1 Score: 83.2 bits (204), Expect = 1.580e-16
Identity = 38/59 (64.41%), Postives = 49/59 (83.05%), Query Frame = 0
Query:  151 EEQQMMKLMGFAGFDTSKGKGVEDNQRGPAKGAISKHKEREYRQYMNRRGGFNRPLDKM 209
            E+  MM+++GF GF ++KGK V+DNQ   A+GA SK+K R+YRQYMNR+GGFNRPLDKM
Sbjct:  109 EQDDMMQMLGFGGFGSTKGKAVQDNQSSAARGAASKNKGRKYRQYMNRKGGFNRPLDKM 167          
BLAST of mRNA_E_fasciculatus_S2_contig69.15031.1 vs. uniprot
Match: A0A8K1CDQ2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CDQ2_PYTOL)

HSP 1 Score: 83.6 bits (205), Expect = 2.570e-16
Identity = 40/59 (67.80%), Postives = 48/59 (81.36%), Query Frame = 0
Query:  149 LTEEQQMMKLMGFAGFDTSKGKGVEDNQRGPAKGAISKHKEREYRQYMNRRGGFNRPLD 207
            L+EE+QM  L+GF GFD++KGK VEDN  G A GA+ K  +REYRQYMNRRGGFNRPL+
Sbjct:  145 LSEEEQMRLLLGFGGFDSTKGKAVEDNVEGAATGAVRKDIKREYRQYMNRRGGFNRPLE 203          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig69.15031.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FW65_ECTSI1.560e-8392.94SNRNP27 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A835ZFB0_9STRA3.420e-2375.41SNRNP27 domain-containing protein n=1 Tax=Tribonem... [more]
A0A5D6YFD5_9STRA3.210e-1871.19SNRNP27 domain-containing protein n=1 Tax=Pythium ... [more]
A0A2D4C0V1_PYTIN4.720e-1871.19U4/U6.U5 small nuclear ribonucleoprotein 27 kDa pr... [more]
A0A7S2BZL9_9STRA1.100e-1750.59Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S3PY04_9STRA1.660e-1765.57Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
K3WFH3_GLOUD6.400e-1769.49SNRNP27 domain-containing protein n=1 Tax=Globispo... [more]
A0A482S2G0_9ARCH1.070e-1667.80DUF1777 domain-containing protein n=1 Tax=archaeon... [more]
B8CB98_THAPS1.580e-1664.41SNRNP27 domain-containing protein n=1 Tax=Thalassi... [more]
A0A8K1CDQ2_PYTOL2.570e-1667.80Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 92..125
NoneNo IPR availablePANTHERPTHR31077FAMILY NOT NAMEDcoord: 3..209
NoneNo IPR availablePANTHERPTHR31077:SF1SMALL NUCLEAR RIBONUCLEOPROTEIN U4/U6.U5 SUBUNIT 27coord: 3..209
IPR013957U4/U6.U5 small nuclear ribonucleoprotein 27kDa proteinPFAMPF08648SNRNP27coord: 151..209
e-value: 1.6E-27
score: 95.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig69contigE_fasciculatus_S2_contig69:52356..54330 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig69.15031.1mRNA_E_fasciculatus_S2_contig69.15031.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig69 52356..54330 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig69.15031.1 ID=prot_E_fasciculatus_S2_contig69.15031.1|Name=mRNA_E_fasciculatus_S2_contig69.15031.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=210bp
MGRSRSRSRSRERGGREERGRGDRDRDRGGRRRDRDQDSRSSRKRSPSRR
HFREDGGKDAAGKDAAGRDKSGKVDKSKGTTNETTKPSKQEARRAEAAIK
RQKMLEEQQREKDKVKDRLHLIRQMKGDASGEEDAHGSGSDGDDDDEDLT
EEQQMMKLMGFAGFDTSKGKGVEDNQRGPAKGAISKHKEREYRQYMNRRG
GFNRPLDKM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013957SNRNP27