prot_E_fasciculatus_S2_contig6783.14906.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig6783.14906.1
Unique Nameprot_E_fasciculatus_S2_contig6783.14906.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length279
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig6783.14906.1 vs. uniprot
Match: A0A6H5JZG6_9PHAE (HRDC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZG6_9PHAE)

HSP 1 Score: 239 bits (610), Expect = 2.110e-71
Identity = 199/278 (71.58%), Postives = 203/278 (73.02%), Query Frame = 0 
Query:    1 MIRLVLARLRFESGGGRLPGSGGEVLRPRATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPAKRVSPPKSASVWSPASRNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFTPSYATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAARLFMPSYAPSASVAGKARRQPGDAAVAGVGEKPEPWTPEVVLRLIKEAGPSGASFEAMVSANPGGNGKALRTLLDSMQEDFVLFTKPAGASGGAPTFLAL 278
            MIRLVLARLRFESGGGRLPGSGGEVLRPRA A XXXXXXXXXXXXXXXXXXXXXXXXXXXXX  AKRVSPPK+ASVWSPASRNS                            LFTPSYAT                        XXXXXXXXXXXXXXXXXXX             AARLF PSYAPSASV+GKARRQPGD AVA VG KP+PWTPEVVLRLIKEAGPSGA+FE MVSANPGGN KALRTLLDSMQEDFVLFTKPAGASGGAPTFLAL
Sbjct:  328 MIRLVLARLRFESGGGRLPGSGGEVLRPRANAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKRVSPPKAASVWSPASRNSGGDSRGAGAGGRSGSGSV----------LFTPSYATTPSPQASSASSSRKLASSAASTKVXXXXXXXXXXXXXXXXXXXAAGAVAVSPPTA-AARLFTPSYAPSASVSGKARRQPGDVAVADVGHKPQPWTPEVVLRLIKEAGPSGATFETMVSANPGGNEKALRTLLDSMQEDFVLFTKPAGASGGAPTFLAL 594
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BLAST of mRNA_E_fasciculatus_S2_contig6783.14906.1 vs. uniprot
Match: D7G9F0_ECTSI (HTH_40 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9F0_ECTSI)

HSP 1 Score: 206 bits (524), Expect = 1.870e-60
Identity = 214/280 (76.43%), Postives = 220/280 (78.57%), Query Frame = 0 
Query:    1 MIRLVLARLRFESGGGRLPGSGGEVLRPRATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPAKRVSPPKSASVWSPASRNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFTPSYATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--AARLFMPSYAPSASVAGKARRQPGDAAVAGVGEKPEPWTPEVVLRLIKEAGPSGASFEAMVSANPGGNGKALRTLLDSMQEDFVLFTKPAGASGGAPTFLAL 278
            MIRLVL+RLRFESGGGRLPGSGGEVLRP+A A                  XXXXXXXXXXXX          SASVWSPAS   XXXXXXXXXXXXXX              LFTPSYAT       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  AARLF PSYAPSASVAGKARRQPGDAA AGVG++PEPWTPEVVLRLIKEAGPSGAS +AMVSANPGG+ KALRTLLD MQEDFVLFTKPAGASGGAPTFLAL
Sbjct:  142 MIRLVLSRLRFESGGGRLPGSGGEVLRPQANAVATGPPSSGGKKRALPSWXXXXXXXXXXXXXXXXXXXX-XSASVWSPASXXXXXXXXXXXXXXXXXRSGSGSGSG-----LFTPSYATTPSPQASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAARLFTPSYAPSASVAGKARRQPGDAAAAGVGDQPEPWTPEVVLRLIKEAGPSGASCKAMVSANPGGSEKALRTLLDGMQEDFVLFTKPAGASGGAPTFLAL 415
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig6783.14906.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JZG6_9PHAE2.110e-7171.58HRDC domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7G9F0_ECTSI1.870e-6076.43HTH_40 domain-containing protein n=1 Tax=Ectocarpu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig6783contigE_fasciculatus_S2_contig6783:235..2316 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig6783.14906.1mRNA_E_fasciculatus_S2_contig6783.14906.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig6783 115..2742 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig6783.14906.1 ID=prot_E_fasciculatus_S2_contig6783.14906.1|Name=mRNA_E_fasciculatus_S2_contig6783.14906.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=279bp
MIRLVLARLRFESGGGRLPGSGGEVLRPRATAAAAAAGAPSSGGKKRALP
SWAGGAGGGGAPAPAKRVSPPKSASVWSPASRNSGGSSGGGGGGGGGGGG
GGGSGGSGSGSGLFTPSYATTTPSPQASSASSSSRKLASSAASTKVFTPP
SSHGPSPRSTTSKNPAAAAAVSPPTAAARLFMPSYAPSASVAGKARRQPG
DAAVAGVGEKPEPWTPEVVLRLIKEAGPSGASFEAMVSANPGGNGKALRT
LLDSMQEDFVLFTKPAGASGGAPTFLAL*
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