prot_E_fasciculatus_S2_contig6769.14888.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig6769.14888.1
Unique Nameprot_E_fasciculatus_S2_contig6769.14888.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length335
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig6769.14888.1 vs. uniprot
Match: A0A6H5JAQ4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JAQ4_9PHAE)

HSP 1 Score: 529 bits (1363), Expect = 1.100e-187
Identity = 276/336 (82.14%), Postives = 290/336 (86.31%), Query Frame = 0 
Query:    1 MTDRLRRRGGIFLTAAGAVLLSGVVTAED-CCVTPFSYFDCTGSGHLASPGKLYTCIDVSEMSGCMSCLRNDAYSDVSCGTCCAIEELDCSKIDSEWDFYASTLFFICLCCCFTALCGFTEVRRQKKGISFAQAWSVPQAMPILRTWPRTSGSNADMSQAGGEVGTQFSALSDDEEDLKRYPVAGLVDDSGMAFGFVTTLPQTLLSSVATSLGQAGSPSPPSPQEPELTVWIARDNEGASASAPAHHGVGGXXG-SAVTGVEANRPGESGGRSSGATRAAGGRQQRAVVVGNDLEEPLMLDGVGTGPXXXXXXXXXXXXXXXXXXXXGRAAVTTGT 334
            MTDRL RR GI LT  GAVLLSGVVTAE+ CC+TPFSYFDCTG+GHLASPGKLYTCIDVSE+S CMSCLRN  YSDVSC TCC+IE LDC+K+DSEWDFYASTLFFICLCCCFTALCG TEVRR+KKGISFAQAWSVPQAMPILRTWPR S S++DMSQAGGEVGTQ++ALSDDEEDLKRYPVAGLVDDSGMAFGFVTTLPQTLLSSVATSL QAGSPSPPSPQEPELTVWI+RDNEGASASAPAH G+GG  G SAVTGVEAN   ES   SSGATRAAGGRQQRAVVVGNDLEEPLMLDGVGTGP                    GRAA TTGT
Sbjct:    1 MTDRLHRREGIILT--GAVLLSGVVTAEENCCITPFSYFDCTGTGHLASPGKLYTCIDVSEVSSCMSCLRNADYSDVSCDTCCSIENLDCTKVDSEWDFYASTLFFICLCCCFTALCGLTEVRRKKKGISFAQAWSVPQAMPILRTWPRRSASSSDMSQAGGEVGTQWAALSDDEEDLKRYPVAGLVDDSGMAFGFVTTLPQTLLSSVATSLRQAGSPSPPSPQEPELTVWISRDNEGASASAPAHRGIGGGSGASAVTGVEANSSEESSRGSSGATRAAGGRQQRAVVVGNDLEEPLMLDGVGTGPGRGGGAAGGIERRQFDGESSGRAAATTGT 334
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BLAST of mRNA_E_fasciculatus_S2_contig6769.14888.1 vs. uniprot
Match: A0A7S2UVG1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVG1_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 2.040e-6
Identity = 44/157 (28.03%), Postives = 71/157 (45.22%), Query Frame = 0 
Query:   29 DCCVTPFSYFDCTGSGHLASPGKLYTCIDVS--EMSGCMSCLRNDAYSDVSCGTCCAIEELDCSKIDSEWDFYASTLFFICLCCCFTALCGFTEVRRQKKGISFAQAWSVPQAMPILRTWPRTSGSNADMSQAGGEVGTQFSALSDDEEDLKRYPVA 183
            DCC  P++  DC+ S      G    C D+   E   CM C       +V C  CC+ ++ +CS   + W  +  T+    +C             R +KG++FA+A+S+P+A+ ++R     +  NAD     G V  + SA+    +DL   P A
Sbjct:   30 DCCHAPYAPVDCSMSEGAKFNGDRLFCFDIEFYEEFECMDCKFTAEAQEVQCYRCCS-DKKECSTHLAMWAMF--TIVITSICXXXXXXXXXXXXXRMRKGLTFAEAYSLPKAVVVVRALTPQTFPNAD-----GTVRYKESAVPVASQDLTNIPHA 178
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig6769.14888.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JAQ4_9PHAE1.100e-18782.14Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2UVG1_9STRA2.040e-628.03Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..97
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 119..334
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 98..118
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..21
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..27
score: 0.793
NoneNo IPR availableTMHMMTMhelixcoord: 9..27
NoneNo IPR availableTMHMMTMhelixcoord: 96..118

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig6769contigE_fasciculatus_S2_contig6769:1036..5799 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig6769.14888.1mRNA_E_fasciculatus_S2_contig6769.14888.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig6769 958..7534 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig6769.14888.1 ID=prot_E_fasciculatus_S2_contig6769.14888.1|Name=mRNA_E_fasciculatus_S2_contig6769.14888.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=335bp
MTDRLRRRGGIFLTAAGAVLLSGVVTAEDCCVTPFSYFDCTGSGHLASPG
KLYTCIDVSEMSGCMSCLRNDAYSDVSCGTCCAIEELDCSKIDSEWDFYA
STLFFICLCCCFTALCGFTEVRRQKKGISFAQAWSVPQAMPILRTWPRTS
GSNADMSQAGGEVGTQFSALSDDEEDLKRYPVAGLVDDSGMAFGFVTTLP
QTLLSSVATSLGQAGSPSPPSPQEPELTVWIARDNEGASASAPAHHGVGG
GGGSAVTGVEANRPGESGGRSSGATRAAGGRQQRAVVVGNDLEEPLMLDG
VGTGPGRGGGAAGGVERGHTGGEASGRAAVTTGT*
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