prot_E_fasciculatus_S2_contig671.14827.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig671.14827.1
Unique Nameprot_E_fasciculatus_S2_contig671.14827.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length78
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig671.14827.1 vs. uniprot
Match: D8LQK6_ECTSI (Transcriptional regulator, AraC family with Parallel beta-helix repeat n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQK6_ECTSI)

HSP 1 Score: 122 bits (306), Expect = 1.200e-30
Identity = 67/75 (89.33%), Postives = 70/75 (93.33%), Query Frame = 0 
Query:    3 QALAWTCELVEGAALVPGVETKCVGRLVLTQDDLDEAQVVTAVTITATDSANELVEDDVSSTVELTTSSSLLVGE 77
            QALAW CEL EGAALVPGVETKCVGRLVLTQ++LDEAQVVT VTITATDSANELVEDD+SSTVEL TSSSLLV E
Sbjct:   43 QALAWACELAEGAALVPGVETKCVGRLVLTQNNLDEAQVVTTVTITATDSANELVEDDLSSTVELPTSSSLLVVE 117
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig671.14827.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQK6_ECTSI1.200e-3089.33Transcriptional regulator, AraC family with Parall... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig671contigE_fasciculatus_S2_contig671:28621..29215 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig671.14827.1mRNA_E_fasciculatus_S2_contig671.14827.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig671 28621..29215 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig671.14827.1 ID=prot_E_fasciculatus_S2_contig671.14827.1|Name=mRNA_E_fasciculatus_S2_contig671.14827.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=78bp
MGQALAWTCELVEGAALVPGVETKCVGRLVLTQDDLDEAQVVTAVTITAT
DSANELVEDDVSSTVELTTSSSLLVGE*
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