prot_E_fasciculatus_S2_contig6704.14820.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig6704.14820.1
Unique Nameprot_E_fasciculatus_S2_contig6704.14820.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length655
Homology
BLAST of mRNA_E_fasciculatus_S2_contig6704.14820.1 vs. uniprot
Match: A0A6H5JAA6_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAA6_9PHAE)

HSP 1 Score: 800 bits (2066), Expect = 2.120e-273
Identity = 514/625 (82.24%), Postives = 536/625 (85.76%), Query Frame = 0
Query:    1 ACVLQLDVAVPQREIPPTVARWYKYMGLALFACLCVSWQHPGT-GEGLWHPSLAFWRKNNEATVTVTASGPNADESGHQCVAGGGAGDADSGVCGSVSVASDGAEEGESVGGSPEGDSGGSWF--FSMEMNTQEYIAHNRWNALRSFHPSTNPWYGPLFLYLDDPILLTPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-ASGKWARVGGGGRSDSASPPSGWLSTLAWPVTYSLRKVGVLSLPANTPGGYSGN---GXXXXXXXXXXXXXXXXXXGVSDSERHECGHASVGGDGXXXXXXXXEGDDEVCWREGKKASAEGSSPAESFSXXXXXXXXXXXXXFSTDDGSSGAEWAAGEPQQQRRIFLEFFGPVVGVFLALGLPAWLSELLTVVAAQLCPLLAAMPLLRLSPRSTKGAGGDSADDLVSLDFSLDLAIYAVFTLVITTATLWRSTWKSFKREQPRSRSLKLLLTAAAYNFLWEVAIIKVAFPIMEHLVFHYVWQWRTRYLLTWLAMSTRVYIMRLLACLRVALLMASPFVPRGLLHTLEGVWCHLFTYLLLGTRFFNTFFVGEGPRRHGGGRAARRWVRAMREARAGAAAANVPMANLAAIPNFPPLPPHRAGAAA 618
            A   +LDVAVPQREIPPTVARWYKYMGLALFACLCVSWQ+PGT GEGLWHPSLAFWRKNNE  VTVT S      S HQCVA GGAG A SG C   SVASDGAE+GE  GGS EG+SGGSW   FSMEMN QEYIAHNRWNALRSFHPST+ W GPLFLYL+DPILLTPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AS K  RVG GG S SASPPSGWLSTLAWPVTYSLRKVGVLS PANT    SGN    XXXXXXXXXXXXXXXXXX     +RHECGHAS G   XXXXXXXXE    VCWREGK+A AE SSP ES+S  XXXXXXXXXXX          E AAGE QQQRRIFLEFFGPVVGVF ALGLPAWLSELLTVVAAQLCPLLAAMPLLRLSPRSTKGAGGDSADDLVSLDFSLDLAIYAVFTL ITTATLWR TWKSFKR++PRSRSLKLLLTAAA++ + EVA+IKVAFPI+EHL+FHYV QWR RYLL WLA+S RV+I+RLLACLRVALLMA+P VPRGLLHTLEGVWCHLFTYLLLGTRFFNTFFVG+GPRRH GGRAARRWVRAMREARAGAA ANVPMANLAAIPNFP LPPHRAGAAA
Sbjct:  606 AARFRLDVAVPQREIPPTVARWYKYMGLALFACLCVSWQYPGTTGEGLWHPSLAFWRKNNEPAVTVTTSA-----SSHQCVAEGGAGGAVSGDC---SVASDGAEKGEFAGGSSEGNSGGSWGWPFSMEMNVQEYIAHNRWNALRSFHPSTSAWSGPLFLYLEDPILLTPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASKKGPRVGRGGSSGSASPPSGWLSTLAWPVTYSLRKVGVLSSPANTSEDSSGNDHGAXXXXXXXXXXXXXXXXXXXXXXDDRHECGHASFGXXXXXXXXXXXE----VCWREGKEAPAEVSSPVESYSAEXXXXXXXXXXXXXXXXXXXXXEGAAGESQQQRRIFLEFFGPVVGVFAALGLPAWLSELLTVVAAQLCPLLAAMPLLRLSPRSTKGAGGDSADDLVSLDFSLDLAIYAVFTLAITTATLWRFTWKSFKRDRPRSRSLKLLLTAAAFHLVREVAMIKVAFPIIEHLLFHYVLQWRRRYLLAWLALSIRVFIIRLLACLRVALLMATPLVPRGLLHTLEGVWCHLFTYLLLGTRFFNTFFVGDGPRRHVGGRAARRWVRAMREARAGAARANVPMANLAAIPNFPRLPPHRAGAAA 1218          
BLAST of mRNA_E_fasciculatus_S2_contig6704.14820.1 vs. uniprot
Match: D7G4J4_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4J4_ECTSI)

HSP 1 Score: 713 bits (1840), Expect = 1.280e-245
Identity = 453/573 (79.06%), Postives = 475/573 (82.90%), Query Frame = 0
Query:   51 SLAFWRKNNEATVTVTASGPNADESGHQCVAGGGAGDADSGVCGSVSVASDGAEEGESVGGSPEGDSGGSW--FFSMEMNTQEYIAHNRWNALRSFHPSTNPWYGPLFLYLDDPILLTPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASGKWARVGGGGRSDSASPPSGWLSTLAWPVTYSLRKVGVLSLPANTPGGYSGNGXXXXXXXXXXXXXXXXXXG---VSDSERHECGHASVGGDGXXXXXXXXEGDDEVCWREGKKASAEGSSPAESFSXXXXXXXXXXXXXFSTDDGSSGAEWAAGEPQQQRRIFLEFFGPVVGVFLALGLPAWLSELLTVVAAQLCPLLAAMPLLRLSPRSTKGAGGDSADDLVSLDFSLDLAIYAVFTLVITTATLWRSTWKSFKREQPRSRSLKLLLTAAAYNFLWEVAIIKVAFPIMEHLVFHYVWQWRTRYLLTWLAMSTRVYIMRLLACLRVALLMASPFVPRGLLHTLEGVWCHLFTYLLLGTRFFNTFFVGEGPRRHGGGRAARRWVRAMREARAGAAAANVPMANLAAIPNFPPLPPHRAGAAA 618
            SLAFWRKNNE  VTVT S      SGHQCVAGGGAGDA SG C   SVA+DGAE+GE    S E   GG+W   FSMEMN QEYIAHNRWNALRSFHPST+PW GPLFLYL+DP+LLTPSXXXXXXXXXXXXXXXXXX            S K  RVGG G SDSASPPSGWLSTLAWPVTYSLRK+GVLS PANT    SG  XXXXXXXXXXXXXXXXXX    VSD +RHECGHASV G  XX        D+EVCWREGKKA  E SSPAE FS   XXXXXXXXXX        GAE AAGEPQQQRRIFLEFFGPVVGVF ALGLPAWLSELLTVVAAQLCPLLAAMPLLRLSPRSTKGA GDSADDLVSLDFSLDLAIYAVFTL I T TLWR TWK+FKR+QPRSR+LKLLLTAAA + + EV +IKVAFPI+EHL+FHYV QWR RYLLTWLA+S RV+I+RLLACLRVALLMA+PFVPRGLLHTLEGVWCHLFTYLLLGTRFFNTFFVG+GPRRH GGRAARRWVRAMREARAGAA ANVPMANLAAIPNFPPLPPHRAGAAA
Sbjct:  356 SLAFWRKNNEPAVTVTTSA-----SGHQCVAGGGAGDAGSGDC---SVANDGAEKGEFAEVSSEEGGGGAWCWLFSMEMNVQEYIAHNRWNALRSFHPSTSPWSGPLFLYLEDPVLLTPSXXXXXXXXXXXXXXXXXX------------SKKGPRVGGDGSSDSASPPSGWLSTLAWPVTYSLRKIGVLSSPANTSEDSSGXXXXXXXXXXXXXXXXXXXXXXXXVSDGDRHECGHASVDGXXXXCCGE----DNEVCWREGKKAPEEVSSPAERFSAESXXXXXXXXXXXXX-----GAEGAAGEPQQQRRIFLEFFGPVVGVFAALGLPAWLSELLTVVAAQLCPLLAAMPLLRLSPRSTKGAEGDSADDLVSLDFSLDLAIYAVFTLAIATVTLWRFTWKTFKRDQPRSRTLKLLLTAAASHLVREVVMIKVAFPIIEHLLFHYVLQWRRRYLLTWLALSIRVFIIRLLACLRVALLMATPFVPRGLLHTLEGVWCHLFTYLLLGTRFFNTFFVGDGPRRHVGGRAARRWVRAMREARAGAARANVPMANLAAIPNFPPLPPHRAGAAA 899          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig6704.14820.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JAA6_9PHAE2.120e-27382.24RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D7G4J4_ECTSI1.280e-24579.06RING-type domain-containing protein n=1 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 377..382
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 383..404
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 359..376
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 484..502
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 526..655
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 463..483
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..358
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 503..525
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 405..423
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 444..462
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 424..443
NoneNo IPR availableTMHMMTMhelixcoord: 461..483
NoneNo IPR availableTMHMMTMhelixcoord: 426..448
NoneNo IPR availableTMHMMTMhelixcoord: 359..381

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig6704contigE_fasciculatus_S2_contig6704:2456..7711 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig6704.14820.1mRNA_E_fasciculatus_S2_contig6704.14820.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig6704 2454..7711 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig6704.14820.1 ID=prot_E_fasciculatus_S2_contig6704.14820.1|Name=mRNA_E_fasciculatus_S2_contig6704.14820.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=655bp
ACVLQLDVAVPQREIPPTVARWYKYMGLALFACLCVSWQHPGTGEGLWHP
SLAFWRKNNEATVTVTASGPNADESGHQCVAGGGAGDADSGVCGSVSVAS
DGAEEGESVGGSPEGDSGGSWFFSMEMNTQEYIAHNRWNALRSFHPSTNP
WYGPLFLYLDDPILLTPSSSSSGKQATPPTTTTATVAASSSSSSSSVASG
KWARVGGGGRSDSASPPSGWLSTLAWPVTYSLRKVGVLSLPANTPGGYSG
NGGGTSTAAAAEAEGGSGDGGVSDSERHECGHASVGGDGGGGGGGGEEGD
DEVCWREGKKASAEGSSPAESFSAESFSAESSSVKSFSTDDGSSGAEWAA
GEPQQQRRIFLEFFGPVVGVFLALGLPAWLSELLTVVAAQLCPLLAAMPL
LRLSPRSTKGAGGDSADDLVSLDFSLDLAIYAVFTLVITTATLWRSTWKS
FKREQPRSRSLKLLLTAAAYNFLWEVAIIKVAFPIMEHLVFHYVWQWRTR
YLLTWLAMSTRVYIMRLLACLRVALLMASPFVPRGLLHTLEGVWCHLFTY
LLLGTRFFNTFFVGEGPRRHGGGRAARRWVRAMREARAGAAAANVPMANL
AAIPNFPPLPPHRAGAAAGAAAGADAGVDAAVPPAAAGGDGRANGNPRGG
GADVG
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