prot_E_fasciculatus_S2_contig6697.14806.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig6697.14806.1
Unique Nameprot_E_fasciculatus_S2_contig6697.14806.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length212
Homology
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig6697.14806.1 vs. uniprot
Match: A0A6H5KZP3_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZP3_9PHAE)

HSP 1 Score: 79.3 bits (194), Expect = 1.370e-13
Identity = 38/62 (61.29%), Postives = 50/62 (80.65%), Query Frame = 0 
Query:    1 ELASDNPQNKKLYLALAVLPRGLAFPAEVAGALLYGSDCSEQDVEVAGKALETLERWSILTV 62
            EL +D+   K+LYL+LA+LP+GLAF ++VA  LLYG +CS  ++E AGKALETLER SILT+
Sbjct:  393 ELEADSLHTKELYLSLAILPKGLAFRSKVAAVLLYGDECSADELEAAGKALETLERLSILTL 454
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig6697.14806.1 vs. uniprot
Match: D7G246_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G246_ECTSI)

HSP 1 Score: 75.9 bits (185), Expect = 1.880e-12
Identity = 44/72 (61.11%), Postives = 50/72 (69.44%), Query Frame = 0 
Query:    1 ELASDNPQNKKLYLALAVLPRGLAFPAEVAGALLYGSDCSEQDVE---VAGKALETLERWSILTVVWARVGG 69
            ELA DNP NK+LYLALAVLP GL FP+EVA ALLY    S +D+E   VA +   TLERWSIL     R+GG
Sbjct:  116 ELAVDNPLNKELYLALAVLPMGLTFPSEVAAALLYDDALSGEDLEDLEVAEEVAATLERWSILI----RMGG 183
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig6697.14806.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KZP3_9PHAE1.370e-1361.29NB-ARC domain-containing protein n=2 Tax=Ectocarpu... [more]
D7G246_ECTSI1.880e-1261.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 48..210
e-value: 4.7E-13
score: 50.7
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 81..191
NoneNo IPR availablePFAMPF13424TPR_12coord: 93..154
e-value: 1.9E-7
score: 31.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig6697contigE_fasciculatus_S2_contig6697:4515..5321 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig6697.14806.1mRNA_E_fasciculatus_S2_contig6697.14806.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig6697 4515..5321 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig6697.14806.1 ID=prot_E_fasciculatus_S2_contig6697.14806.1|Name=mRNA_E_fasciculatus_S2_contig6697.14806.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=212bp
ELASDNPQNKKLYLALAVLPRGLAFPAEVAGALLYGSDCSEQDVEVAGKA
LETLERWSILTVVWARVGGEDVPSRPYEAVLEAMDPSSSELPTTLVSAAG
FHEQREEWREAHRLFSQELALQTKAVGIDHSDVATTLIQLGVCAFKARKT
AEAEGSPAIREKAMVVDQPNAATILHSLGVRADETGGTDEAGVYNGPALT
MPEATSGVNRDG
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf