prot_E_fasciculatus_S2_contig6694.14802.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig6694.14802.1
Unique Nameprot_E_fasciculatus_S2_contig6694.14802.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length158
Homology
BLAST of mRNA_E_fasciculatus_S2_contig6694.14802.1 vs. uniprot
Match: A0A6H5KTC2_9PHAE (Ribosomal_L28e domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KTC2_9PHAE)

HSP 1 Score: 290 bits (741), Expect = 9.850e-99
Identity = 147/157 (93.63%), Postives = 154/157 (98.09%), Query Frame = 0
Query:    1 MTNVSNELVWSLVRRNTCFLYKRNGQTKRSGKIVLTAEPNNLTNVNSYKCSGLANSKAVGIQFAKDAKDRPCAAMTLKSSKNGSKPKKSVGKSLLKKTHPSVSQAIMKQTGGTNYRPDLQDAALVRWSRVHRALKVQRGERKPMTVNAGRKNLKATA 157
            MTNVSNELVWSLVRRNTCFLYKRNGQTKRSGK+VLTAEPNNLTNVNSYK SGLANSKAVGIQFAKD KDRPCAA+TLKSSKNG+KPKKSVG+SLLKKTHPSVSQAIMKQTGGTNYRPDLQ AALVRWS+VHRAL+VQ+GERKPMTVNAGRKNLKATA
Sbjct:    1 MTNVSNELVWSLVRRNTCFLYKRNGQTKRSGKVVLTAEPNNLTNVNSYKYSGLANSKAVGIQFAKDPKDRPCAAITLKSSKNGNKPKKSVGRSLLKKTHPSVSQAIMKQTGGTNYRPDLQHAALVRWSKVHRALRVQKGERKPMTVNAGRKNLKATA 157          
BLAST of mRNA_E_fasciculatus_S2_contig6694.14802.1 vs. uniprot
Match: A0A836CDH5_9STRA (Putative 60S ribosomal protein L28 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDH5_9STRA)

HSP 1 Score: 145 bits (366), Expect = 1.090e-41
Identity = 81/155 (52.26%), Postives = 108/155 (69.68%), Query Frame = 0
Query:    1 MTNVSNELVWSLVRRNTCFLYKRNGQTKRSGKIVLTAEPNNLTNVNSYKCSGLANSKAVGIQFAKDAKDRPCAAMTLKSSKNGSKPKKSVGKSLLKKTHPSVSQAIMKQTGGTNYRPDLQDAALVRWSRVHRALKVQRGERKPMTVNAGRKNLKA 155
            M+ + + LVWSLVR+N CF+ KRNG T+RSG++VL+ EP NL NV+S+K SGLANSKAVGI    D K RPC  +T KSSK  ++P K+V ++LLKK + S ++A+   T GT YR DL   AL R+  V+RA + +RG  KPM V  GR+  K+
Sbjct:    1 MSIIPDSLVWSLVRQNNCFMQKRNGNTRRSGRVVLSGEPMNLKNVHSFKYSGLANSKAVGIAEGADDKGRPCVVLTQKSSKKVNQPAKAVAQTLLKKNNRSSARAVKAITAGTFYREDLTQDALARFCIVNRATRAKRGLAKPM-VTKGRRAKKS 154          
BLAST of mRNA_E_fasciculatus_S2_contig6694.14802.1 vs. uniprot
Match: A0A7S2DNV5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DNV5_9STRA)

HSP 1 Score: 122 bits (306), Expect = 1.520e-32
Identity = 70/146 (47.95%), Postives = 88/146 (60.27%), Query Frame = 0
Query:    1 MTNVSNELVWSLVRRNTCFLYKRNGQTKRSGKIVLTAEPNNLTNVNSYKCSGLANSKAVGIQFAKDAKD---RPCAAMTLKSSKNGSKPKKSVGKSLLKKTHPSVSQAIMKQTGGTNYRPDLQDAALVRWSRVHRALKVQRGERKP 143
            M    + L W LV+   CF  KRNGQTKRSG IVL++EP NL N+N++K SGLANSKA+   F ++ +D   +   +M LK SKNG +P K      L K    V + I  QT    YR DL DAAL RWS +HR  KV++G  KP
Sbjct:    1 MATCPDSLTWMLVKNQNCFQQKRNGQTKRSGMIVLSSEPGNLRNINAFKYSGLANSKAIRFDFKEEGEDDDKKIKMSMGLKISKNGKRPNKQYSTIPLNKDFRRVEKCIKAQTVDQAYRADLLDAALARWSALHRYSKVKKGIMKP 146          
BLAST of mRNA_E_fasciculatus_S2_contig6694.14802.1 vs. uniprot
Match: RL281_ARATH (60S ribosomal protein L28-1 n=13 Tax=Brassicaceae TaxID=3700 RepID=RL281_ARATH)

HSP 1 Score: 103 bits (258), Expect = 1.640e-25
Identity = 63/136 (46.32%), Postives = 83/136 (61.03%), Query Frame = 0
Query:    1 MTNVSNELVWSLVRRNTCFLYKRNGQTKRSGKIVLTAEPNNLTNVNSYKCSGLANSKAVGIQFAKDAKDRPCAAMTLKSSKNGSKPKKSVGKSLLKKTHPSVSQAIMKQTGGTNYRPDLQDAALVRWSRVHRALKV 136
            M  V  +L+W +V+ N CFL K+ G  + + K+  + E NNLTNV+SYK SGLAN K V IQ A   KD+     T K+ K   KPK SV KS+LKK  P +S+A+  Q     YRPDL+ AAL R S + + L+V
Sbjct:    1 MATVPGQLIWEIVKNNNCFLVKQFG--RGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTIQAAD--KDQAVVLATTKTKKQN-KPKLSVNKSILKKEFPRMSKAVANQVVDNYYRPDLKKAALARLSAISKGLRV 131          
BLAST of mRNA_E_fasciculatus_S2_contig6694.14802.1 vs. uniprot
Match: A0A7S2EU82_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EU82_TRICV)

HSP 1 Score: 100 bits (250), Expect = 3.170e-24
Identity = 62/151 (41.06%), Postives = 86/151 (56.95%), Query Frame = 0
Query:    1 MTNVSNELVWSLVRRNTCFLYKRNGQTKRSGKIVLTAEPNNLTNVNSYKCSGLANSKAVGIQFAKDAKDRPCAAMTLKS-SKNGSKPKKSVGKSLLKKTHPSVSQAIMKQTGGTNYRPDLQDAALVRWSRVHRALKVQRGERKPMTVNAGR 150
            M +  + LVW LV RN CF+ K NG+T RSG I  + EP NL ++++ + SG+AN+KAVGI FA+  K    A +T K+ SK  + PKK      L K +    + I  Q     YRPDL  AA  ++S V+RA +  +G +K   V  GR
Sbjct:    1 MVHCPDALVWQLVNRNNCFMKKTNGRTSRSGSIKFSVEPGNLRSLSTLRYSGIANTKAVGIDFAEGDK----AVLTTKTASKASTAPKKGRATIPLNKDYRRTEKTIRSQVLDNRYRPDLVGAATAKYSAVYRANRFAKGVKKAPAVKKGR 147          
BLAST of mRNA_E_fasciculatus_S2_contig6694.14802.1 vs. uniprot
Match: A0A6T5Y454_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A6T5Y454_9STRA)

HSP 1 Score: 100 bits (250), Expect = 3.260e-24
Identity = 59/150 (39.33%), Postives = 85/150 (56.67%), Query Frame = 0
Query:    1 MTNVSNELVWSLVRRNTCFLYKRNGQTKRSGKIVLTAEPNNLTNVNSYKCSGLANSKAVGIQFAKDAKDRPCAAMTLKSSKNGSKPKKSVGKSLLKKTHPSVSQAIMKQTGGTNYRPDLQDAALVRWSRVHRALKVQRGERKPMTVNAGR 150
            M  V + LVW LV+ NTCF+ K NGQTKRSG +  + E  N+ +++ +K SGLANSK   +           A +T  +SK  +KP K +  + + K    V   I KQT    YRPDL+ A L +W++V++A +  +G  KP+ V  GR
Sbjct:    1 MVQVPDSLVWELVKSNTCFMKKMNGQTKRSGSVKFSVEKGNVKSLSMFKYSGLANSKVTDVVCTDG---NGAALITKTASKAHTKPSKGMVSTNINKDFRRVENVIEKQTISNYYRPDLKAAVLGKWTKVYQANRRAKGITKPIPVKKGR 147          
BLAST of mRNA_E_fasciculatus_S2_contig6694.14802.1 vs. uniprot
Match: A0A6S8Y1B1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6S8Y1B1_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 2.890e-23
Identity = 61/151 (40.40%), Postives = 82/151 (54.30%), Query Frame = 0
Query:    1 MTNVSNELVWSLVRRNTCFLYKRNGQTKRSGKIVLTAEPNNLTNVNSYKCSGLANSKAVGIQFAKDAKDRPCAAMTLKSSKNGSKPKKSVGKSLLKKTHPSVSQAIMKQTGGTNYRPDLQDAALVRWSRVHRALKVQRGERKPMTVNAGRK 151
            MT++     W  VR N+ FL KRNG       +  + EP NLT +N+YK SGL N KA+ I   +D K      M LK+ K  +KP KS+ K+ L+K     ++AI  QT G  YR DL   AL R++ +HR  KVQ+G  K      GR+
Sbjct:    1 MTSLPASQAWLYVRNNSSFLVKRNG-------VQFSREPGNLTQLNTYKSSGLCNDKAIDINLDEDGK----IVMALKAPKRATKPSKSLNKTPLRKNFRRSAKAIQSQTAGKFYRGDLTGKALARYAALHRFTKVQQGLAKKAKTKTGRR 140          
BLAST of mRNA_E_fasciculatus_S2_contig6694.14802.1 vs. uniprot
Match: A0A6V2ABZ3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2ABZ3_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 6.960e-23
Identity = 57/153 (37.25%), Postives = 85/153 (55.56%), Query Frame = 0
Query:    1 MTNVSNELVWSLVRRNTCFLYKRNGQTKRSGKIVLTAEPNNLTNVNSYKCSGLANSKAVGIQFAKDAKDRPCAAMTLKSSKNGSKPKKSVGKSLLKKTHPSVSQAIMKQTGGTNYRPDLQDAALVRWSRVHRALKVQRGERKPMTVNAGRKNL 153
            M  +S+ L W LV++NT F+ K NG+++RSG I  + E  N+ ++NS+K SGLANSK + I    D +      ++ K+ K  ++ KK    + L K    V   I  Q     YRPDL   AL +WS V+RA +  +G +K + +  GRK L
Sbjct:    1 MVQISDSLCWELVKKNTSFMKKVNGRSRRSGTIQFSVEKGNVKSINSFKYSGLANSKTIDIASTADNR----GMLSTKTKKAHNEVKKGQAATPLNKDFRRVEHTIKSQALDNYYRPDLSKDALAKWSAVYRANRYAKGIKKTLPMKKGRKTL 149          
BLAST of mRNA_E_fasciculatus_S2_contig6694.14802.1 vs. uniprot
Match: A0A7S3L5W0_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L5W0_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 7.140e-23
Identity = 61/150 (40.67%), Postives = 89/150 (59.33%), Query Frame = 0
Query:    1 MTNVSNELVWSLVRRNTCFLYKRNGQTKRSGKIVLTAEPNNLTNVNSYKCSGLANSKAVGIQFAKDAKDRPCAAMTLKSSKNGSKPKKSVGKSLLKKTHPSVSQAIMKQTGGTNYRPDLQDAALVRWSRVHRALKVQRGERKPMTVNAGR 150
            M  + ++L W LV+ N  FL K+NG +KRSGK+  + EP NL ++N +K SG+ANSKAV I    D ++R     T  +SK G++PKKS   S + K        IMK T    YR DL+ AAL ++++V++A +  +G  KP+    GR
Sbjct:    1 MVAIPDQLCWELVKGNHAFLKKKNGHSKRSGKVSFSTEPGNLKSLNMFKYSGIANSKAVDILI--DGENR-AQLYTKTASKCGAQPKKSKVVSNINKDFRRAESVIMKTTVNNFYRRDLKAAALGKYTKVYQANRRAKGITKPVPTKKGR 147          
BLAST of mRNA_E_fasciculatus_S2_contig6694.14802.1 vs. uniprot
Match: A0A7J7L6F9_9MAGN (Ribosomal_L28e domain-containing protein n=1 Tax=Kingdonia uniflora TaxID=39325 RepID=A0A7J7L6F9_9MAGN)

HSP 1 Score: 97.1 bits (240), Expect = 1.010e-22
Identity = 62/145 (42.76%), Postives = 84/145 (57.93%), Query Frame = 0
Query:    1 MTNVSNELVWSLVRRNTCFLYKRNGQTKRSGKIVLTAEPNNLTNVNSYKCSGLANSKAVGIQFAKDAKDRPCAAMTLKSSKNGSKPKKSVGKSLLKKTHPSVSQAIMKQTGGTNYRPDLQDAALVRWSRVHRALKVQRGERKPMT 145
            M  V   L+W +V+RN  FL K  G    S  +  + E NNL N+NS+K SGLAN+K V IQ   + KD+     T K+ K   +P K V KS++KK    +++A+  Q G   YRPDL+DAAL R S VHR++KV +   K  T
Sbjct:    1 MATVPGSLIWEIVKRNNSFLIKEFGNG--SQMVQFSKETNNLYNLNSFKHSGLANTKTVSIQA--EGKDQAVVLATTKTKKQN-QPGKLVHKSVMKKEFRRMAKAVKNQVGDNFYRPDLKDAALARLSVVHRSIKVSKSGVKKRT 140          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig6694.14802.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KTC2_9PHAE9.850e-9993.63Ribosomal_L28e domain-containing protein n=2 Tax=E... [more]
A0A836CDH5_9STRA1.090e-4152.26Putative 60S ribosomal protein L28 n=1 Tax=Tribone... [more]
A0A7S2DNV5_9STRA1.520e-3247.95Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
RL281_ARATH1.640e-2546.3260S ribosomal protein L28-1 n=13 Tax=Brassicaceae ... [more]
A0A7S2EU82_TRICV3.170e-2441.06Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A6T5Y454_9STRA3.260e-2439.33Hypothetical protein n=1 Tax=Thalassionema nitzsch... [more]
A0A6S8Y1B1_9STRA2.890e-2340.40Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A6V2ABZ3_9STRA6.960e-2337.25Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S3L5W0_9STRA7.140e-2340.67Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7J7L6F9_9MAGN1.010e-2242.76Ribosomal_L28e domain-containing protein n=1 Tax=K... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029004Ribosomal L28e/Mak16PFAMPF01778Ribosomal_L28ecoord: 8..132
e-value: 8.0E-29
score: 100.7
NoneNo IPR availableGENE3D3.30.390.110coord: 5..137
e-value: 4.1E-39
score: 135.7
IPR002672Ribosomal protein L28ePANTHERPTHR1054460S RIBOSOMAL PROTEIN L28coord: 1..142

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig6694contigE_fasciculatus_S2_contig6694:418..4713 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig6694.14802.1mRNA_E_fasciculatus_S2_contig6694.14802.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig6694 2..4749 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig6694.14802.1 ID=prot_E_fasciculatus_S2_contig6694.14802.1|Name=mRNA_E_fasciculatus_S2_contig6694.14802.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=158bp
MTNVSNELVWSLVRRNTCFLYKRNGQTKRSGKIVLTAEPNNLTNVNSYKC
SGLANSKAVGIQFAKDAKDRPCAAMTLKSSKNGSKPKKSVGKSLLKKTHP
SVSQAIMKQTGGTNYRPDLQDAALVRWSRVHRALKVQRGERKPMTVNAGR
KNLKATA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002672Ribosomal_L28e
IPR029004L28e/Mak16