prot_E_fasciculatus_S2_contig6691.14799.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E_fasciculatus_S2_contig6691.14799.1
Unique Name	prot_E_fasciculatus_S2_contig6691.14799.1
Type	polypeptide
Organism	Ectocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length	419

Homology

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BLAST of mRNA_E_fasciculatus_S2_contig6691.14799.1 vs. uniprot
Match: D7FJZ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJZ3_ECTSI)

HSP 1 Score: 140 bits (353), Expect = 3.080e-35
Identity = 136/276 (49.28%), Postives = 146/276 (52.90%), Query Frame = 0

Query:  155 ESPIETTAPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRXTXXXXXAPTTAAAAETTAPITPTXXXXXXXXXXXXXXXXXXXXXXEATGTPAVVQPTAAALTPSPQTTGGEEFSSESPSPAESTPAPTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADGDAG----------DEDFVVGTGLSDDEKRDVILGTSIIGGLAVALVFGACFVARYNARMARLEDXXXXXXX---RPGERRIAMKKGFASYRLKRVADT 417
            E+P+ETTAPT                     X       XXXXXXX   R T     APTTAA A T API   XXXX XXXXX          XX              A++P+PQ TGGE FSSESP   ESTPAPT                                     DGDA           DEDFV GTGLSD+EKRD+ILGTSIIGG+AVALVFGACFVARYNARMARL+D XXXXX    R GERRIAM+KGFASYRL RV DT
Sbjct:    2 EAPVETTAPTRPAVETPAPIAAAEVTAGPAVXSATPQPNXXXXXXXPTVRVTAGRTPAPTTAATAVTIAPIXXXXXXXGXXXXXAAQETPVPGTXXXXXXXXXXXXXXXTAMSPAPQATGGE-FSSESP--VESTPAPTAAPAGAGGEVYPSDAGTTPTSPSPGE-----------DGDASADGXXXXXXXDEDFVFGTGLSDNEKRDIILGTSIIGGMAVALVFGACFVARYNARMARLDDEXXXXXVDVTRRGERRIAMRKGFASYRLSRVGDT 263

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BLAST of mRNA_E_fasciculatus_S2_contig6691.14799.1 vs. uniprot
Match: A0A6H5K445_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K445_9PHAE)

HSP 1 Score: 129 bits (324), Expect = 2.510e-30
Identity = 184/352 (52.27%), Postives = 192/352 (54.55%), Query Frame = 0

Query:   68 MVREEVRGSRGENAGLLSAWDTAARTAVGRSKASRRTAESKGRTLALAQPTTDTYITTPPPXXXXXXXXXXXXXXXXXXXSPTAHMRESPIETTAPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRXTXXXXXAPTTAAAAETTAPITPTXXXXXXXXXXXXXXXXXXXXXXEATGTPAVVQPTAAALTPSPQTTGGEEFSSESPSPAESTPAPTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADGDAGDEDFVVGTGLSDDEKRDVILGTSIIGGLAVALVFGACFVARYNARMARL--EDXXXXXXXRPGERRIAMKKGFASYRLKRVADT 417
            M REEVRGSRGE+AGLLSA + AA  AVGRSKASRRTAESKG T + A      Y   PPP                   SPTA   E+PIETTAPT  XXXXXXXXXXXXXXXXXX                     T       T              XXXXXXXXXXXXXXXXXXXXXX                                    ESTPAPT                    XXXXXXXXXXXXXXXX         FV GTGLSDDEKRD+ILGTSIIGGLAVALVFGACFVAR+NAR+ARL  ED       R GERRIAM+KGFASYRL RVADT
Sbjct:    1 MAREEVRGSRGESAGLLSAGNAAA--AVGRSKASRRTAESKGPTPSPAV----AYTPMPPPTSAAVATSVAPVNTAIATPSPTARRTEAPIETTAPTRPXXXXXXXXXXXXXXXXXXASATPQPTASAATPTP-----TMRVTAGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESTPAPTAAAAGAGGALDPSDAGTTPTXXXXXXXXXXXXXXXXXXXXXXXX-FVFGTGLSDDEKRDIILGTSIIGGLAVALVFGACFVARFNARVARLDDEDDDDVDVTRRGERRIAMRKGFASYRLSRVADT 340

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig6691.14799.1 vs. uniprot

BLAST of mRNA_E_fasciculatus_S2_contig6691.14799.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FJZ3_ECTSI	3.080e-35	49.28	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5K445_9PHAE	2.510e-30	52.27	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 374..394
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 23..30
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 11..22
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 31..352
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 376..418
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..10
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 353..375
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..30
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..30 score: 0.575
None	No IPR available	TMHMM	TMhelix		coord: 353..375

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E_fasciculatus_S2_contig6691	contig	E_fasciculatus_S2_contig6691:3574..4887 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-07-07

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E_fasciculatus_S2_contig6691.14799.1	mRNA_E_fasciculatus_S2_contig6691.14799.1	Ectocarpus fasciculatus EfasUO2	mRNA	E_fasciculatus_S2_contig6691 3574..4887 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E_fasciculatus_S2_contig6691.14799.1 ID=prot_E_fasciculatus_S2_contig6691.14799.1|Name=mRNA_E_fasciculatus_S2_contig6691.14799.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=419bp
MVRKTMPRRRVSATLLRVAVVASTVASGWSEDTQHRHHHVIDGSGDGFFT
VVGKAGRSGGKGIGSMSMVREEVRGSRGENAGLLSAWDTAARTAVGRSKA
SRRTAESKGRTLALAQPTTDTYITTPPPTSATIATSTAPVNTATATPSPT
AHMRESPIETTAPTRPAVETPAPITAAEVTTGPVASATPEPTAIAATTPT
PTVRATAAQTPAPTTAAAAETTAPITPTPTAPGPTPTPTAQETPVPVAAA
EATGTPAVVQPTAAALTPSPQTTGGEEFSSESPSPAESTPAPTTAPEAGA
GGEVDPSDAGAAPTSPSPSEDPDGSVNGDADGDAGDEDFVVGTGLSDDEK
RDVILGTSIIGGLAVALVFGACFVARYNARMARLEDDDDDDEERPGERRI
AMKKGFASYRLKRVADTP*