prot_E_fasciculatus_S2_contig6680.14787.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig6680.14787.1
Unique Nameprot_E_fasciculatus_S2_contig6680.14787.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length251
Homology
BLAST of mRNA_E_fasciculatus_S2_contig6680.14787.1 vs. uniprot
Match: D8LRJ1_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRJ1_ECTSI)

HSP 1 Score: 219 bits (557), Expect = 6.490e-66
Identity = 116/171 (67.84%), Postives = 130/171 (76.02%), Query Frame = 0
Query:   41 QGDREWLSILETEIMVLSDGIDVIPTPSPTXXXXXXXXXXX------------TTTTTTANSCLDPLHADYACQGGEDDGLYPQPDSVVLRDCGLTDADWDDIKACLVVAGEETDTTITTLIVSGNPDLATVPEDLFQVSPSLASSMTWLTLADTKISSLPPGLLDPLSEL 199
            +GDREWLSI+ETEIMVLSDG DV+ TP PT        XXX                TT N CLDPLHADYACQGGEDDGLYP PDSVVL DCGLTDADW+DIKACLVVAGEETDTTITTLI+SGNPD+ TVPE LF+VSPSLASSMTWL+L    ++++P G+ D L +L
Sbjct:   94 RGDREWLSIIETEIMVLSDGDDVVQTPGPTDGHEAIPTXXXXXXXXXXXXXXXVLPPTTVNPCLDPLHADYACQGGEDDGLYPPPDSVVLTDCGLTDADWEDIKACLVVAGEETDTTITTLIMSGNPDITTVPEGLFEVSPSLASSMTWLSLEYNALTTIPGGMFDSLVKL 264          
BLAST of mRNA_E_fasciculatus_S2_contig6680.14787.1 vs. uniprot
Match: D7FL48_ECTSI (Leucine rich repeat carbohydrate binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL48_ECTSI)

HSP 1 Score: 107 bits (267), Expect = 6.000e-23
Identity = 74/164 (45.12%), Postives = 92/164 (56.10%), Query Frame = 0
Query:    3 VSVDGVSVKTWASSGTTSSFESIDISGYSGQVVSITGVQ-GDREWLSILETEIMVLSDGIDVIPTPSPTXXXXXXXXXXXTTTTTTANSCLDPLHADYACQGGEDDGLYPQPDSVVLRDCGLTDADWDDIKACLVVAGEETDTTITTLIVSGNPDLATVPEDLF 165
            V+VDG  V TW SSGTTS FES+D+SG +GQVV+ITG +  D EWLSI+ETEIMV +    V P PSPT           TT     N C D    DY C   EDD     P++V L +C   DAD  DI ACL + G+     I  + +  + DL T+P  +F
Sbjct:  267 VAVDGDLVTTWTSSGTTSGFESVDMSGATGQVVTITGAELSDSEWLSIVETEIMVYNG---VAPPPSPTTPATPSPTLPPTTD---LNVCFDSTSDDYRCLPSEDD-----PNTVYLNNCNFVDADGADIPACLEIFGKAD---IQFVYMPFHDDLTTLPVGVF 416          
BLAST of mRNA_E_fasciculatus_S2_contig6680.14787.1 vs. uniprot
Match: A0A6H5L1V3_9PHAE (F5/8 type C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L1V3_9PHAE)

HSP 1 Score: 105 bits (261), Expect = 3.920e-22
Identity = 72/169 (42.60%), Postives = 94/169 (55.62%), Query Frame = 0
Query:    1 MDVSVDGVSVKTWASSGTTSSFESIDISGYSGQVVSITGV-QGDREWLSILETEIMVLSDGIDVIPTPSPTXXXXXXXXXXXTTTTTTA--NSCLDPLHADYACQGGEDDGLYPQPDSVVLRDCGLTDADWDDIKACLVVAGEETDTTITTLIVSGNPDLATVPEDLFQ 166
            +DVSVDG  V TW SSGTT+ FES+D+SG  GQVV+I+G  Q D +WLSI+ETEIMV        P PSPT           +  + TA  N C D  + DY CQ   D     QP  + L +C   D+D  D+ AC    G+   T I TL ++ + DL T+P  +F+
Sbjct:  268 VDVSVDGALVTTWTSSGTTTEFESVDLSGAYGQVVTISGSNQADSQWLSIIETEIMVYEGDA---PAPSPTTPPPVVMPMTPSPVSPTAGINPCFDSTNDDYRCQPSVD-----QPAYIDLNNCNFVDSDAADLPACFESFGK---TDIETLHLTFHDDLTTLPAGVFE 425          
BLAST of mRNA_E_fasciculatus_S2_contig6680.14787.1 vs. uniprot
Match: A0A6H5KL74_9PHAE (F5/8 type C domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KL74_9PHAE)

HSP 1 Score: 83.6 bits (205), Expect = 1.320e-14
Identity = 42/70 (60.00%), Postives = 53/70 (75.71%), Query Frame = 0
Query:    1 MDVSVDGVSVKTWASSGTTSSFESIDISGYSGQVVSITGVQGDREWLSILETEIMVLSDGIDVIPTPSPT 70
            +DV+VDG    TW SSGTT  FE++D+SGYSGQ V++TGV  D EW+SI ET+IMVLSD +   P+PS T
Sbjct:  271 VDVTVDGSLATTWTSSGTTDGFENVDLSGYSGQDVTVTGVLDDSEWVSITETDIMVLSDSVVSPPSPSTT 340          
BLAST of mRNA_E_fasciculatus_S2_contig6680.14787.1 vs. uniprot
Match: A0A6H5KFA6_9PHAE (F5/8 type C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KFA6_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 1.780e-14
Identity = 43/68 (63.24%), Postives = 52/68 (76.47%), Query Frame = 0
Query:    1 MDVSVDGVSVKTWASSGTTSSFESIDISGYSGQVVSITGVQGDREWLSILETEIMVLSDGIDVIPTPS 68
            +DVSVDG    TW SSGTT  FE+ID+SGYSGQ +++TGV  + EWLSI ETEIMVLSDG+   P+ S
Sbjct:  269 VDVSVDGSLATTWTSSGTTDGFENIDLSGYSGQDITVTGVLDNLEWLSIKETEIMVLSDGVVFPPSAS 336          
BLAST of mRNA_E_fasciculatus_S2_contig6680.14787.1 vs. uniprot
Match: D7FTH1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTH1_ECTSI)

HSP 1 Score: 78.2 bits (191), Expect = 8.990e-13
Identity = 41/66 (62.12%), Postives = 47/66 (71.21%), Query Frame = 0
Query:    1 MDVSVDGVSVKTWASSGTTSSFESIDISGYSGQVVSITGVQGDREWLSILETEIMVLSDGIDVIPT 66
            M+V VD   V TW SSGTT  FE+ID+SG SGQV+ ITGV  D EWLSI+E EIM+L DG    PT
Sbjct:  442 MEVRVDDALVITWTSSGTTDGFEAIDMSGTSGQVLEITGVLDDSEWLSIIEAEIMLLEDGASPTPT 507          
BLAST of mRNA_E_fasciculatus_S2_contig6680.14787.1 vs. uniprot
Match: A0A6H5KH45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH45_9PHAE)

HSP 1 Score: 77.4 bits (189), Expect = 1.590e-12
Identity = 41/66 (62.12%), Postives = 46/66 (69.70%), Query Frame = 0
Query:    1 MDVSVDGVSVKTWASSGTTSSFESIDISGYSGQVVSITGVQGDREWLSILETEIMVLSDGIDVIPT 66
            M V VD   V TW SSGTT  FE+ID+SG  GQV+ ITGV  D EWLSI+E EIMVL DG   +PT
Sbjct:  255 MKVRVDDALVTTWTSSGTTDGFEAIDLSGTWGQVLEITGVLDDSEWLSIIEAEIMVLEDGASPMPT 320          
BLAST of mRNA_E_fasciculatus_S2_contig6680.14787.1 vs. uniprot
Match: D7FZZ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZZ4_ECTSI)

HSP 1 Score: 70.5 bits (171), Expect = 3.520e-10
Identity = 41/70 (58.57%), Postives = 48/70 (68.57%), Query Frame = 0
Query:    1 MDVSVDGVSVKTWASSGTTSSFESIDI-SGYSGQVVSITGVQGDREWLSILETEIMVLSDGIDVIPTPSP 69
            +DVSVDGV V TW SSGTT  FESI    G SG V+++ GV  D EWLSI+ETEIMV    + V P P+P
Sbjct:  331 IDVSVDGVLVATWTSSGTTDGFESIAFPDGVSGTVINLQGVLDDSEWLSIIETEIMVWPQNV-VTPPPTP 399          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig6680.14787.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D8LRJ1_ECTSI6.490e-6667.84Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
D7FL48_ECTSI6.000e-2345.12Leucine rich repeat carbohydrate binding protein n... [more]
A0A6H5L1V3_9PHAE3.920e-2242.60F5/8 type C domain-containing protein n=2 Tax=Ecto... [more]
A0A6H5KL74_9PHAE1.320e-1460.00F5/8 type C domain-containing protein n=3 Tax=Ecto... [more]
A0A6H5KFA6_9PHAE1.780e-1463.24F5/8 type C domain-containing protein n=2 Tax=Ecto... [more]
D7FTH1_ECTSI8.990e-1362.12Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5KH45_9PHAE1.590e-1262.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZZ4_ECTSI3.520e-1058.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 173..195
e-value: 150.0
score: 3.6
coord: 220..243
e-value: 0.36
score: 19.9
coord: 196..219
e-value: 0.028
score: 23.6
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 174..233
e-value: 5.0E-9
score: 35.8
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 111..250
e-value: 4.7E-19
score: 70.0
NoneNo IPR availablePANTHERPTHR24373:SF271CARBOXYPEPTIDASE N SUBUNIT 2coord: 147..248
NoneNo IPR availablePANTHERPTHR24373SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEINcoord: 147..248
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 121..247

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig6680contigE_fasciculatus_S2_contig6680:4160..7698 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig6680.14787.1mRNA_E_fasciculatus_S2_contig6680.14787.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig6680 4127..7977 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig6680.14787.1 ID=prot_E_fasciculatus_S2_contig6680.14787.1|Name=mRNA_E_fasciculatus_S2_contig6680.14787.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=251bp
MDVSVDGVSVKTWASSGTTSSFESIDISGYSGQVVSITGVQGDREWLSIL
ETEIMVLSDGIDVIPTPSPTDGDDVIPTPSPTTTTTTANSCLDPLHADYA
CQGGEDDGLYPQPDSVVLRDCGLTDADWDDIKACLVVAGEETDTTITTLI
VSGNPDLATVPEDLFQVSPSLASSMTWLTLADTKISSLPPGLLDPLSELG
FLSLDDNALTSIPGGMFDSLVKLWGLFLTGNGLSELPEGIFDTLGALDWL
*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt
IPR003591Leu-rich_rpt_typical-subtyp