prot_E_fasciculatus_S2_contig668.14785.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig668.14785.1
Unique Nameprot_E_fasciculatus_S2_contig668.14785.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length105
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig668.14785.1 vs. uniprot
Match: A0A6H5KK71_9PHAE (BRCT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK71_9PHAE)

HSP 1 Score: 180 bits (457), Expect = 1.590e-54
Identity = 93/105 (88.57%), Postives = 97/105 (92.38%), Query Frame = 0 
Query:    1 MKGVTHVIAENLSAVKTDKAMKSLKMKVVHPDWLNRCIAAGKLLPDAPFRVVRSQKLGMDNYFGSSSSTPVSSPSSGCNDEEGRRNSSAQKENGKEGKSRQHRSV 105
            MKGVTHVIAENLSAVKTDKAMKSLKMKVVHPDW+NRCIA GKLLPDAPFRVVRSQKLGMD +FGSSSS PVSSPS GCND+EGRRN+ AQKENGKE K R HRSV
Sbjct:  121 MKGVTHVIAENLSAVKTDKAMKSLKMKVVHPDWVNRCIAEGKLLPDAPFRVVRSQKLGMDKFFGSSSSAPVSSPSPGCNDDEGRRNNRAQKENGKEAKPRHHRSV 225
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig668.14785.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KK71_9PHAE1.590e-5488.57BRCT domain-containing protein n=1 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036420BRCT domain superfamilyGENE3D3.40.50.10190coord: 1..58
e-value: 8.2E-12
score: 47.2
IPR036420BRCT domain superfamilySUPERFAMILY52113BRCT domaincoord: 3..51
IPR001357BRCT domainPROSITEPS50172BRCTcoord: 1..51
score: 14.146

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig668contigE_fasciculatus_S2_contig668:21427..22541 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig668.14785.1mRNA_E_fasciculatus_S2_contig668.14785.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig668 21427..22541 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig668.14785.1 ID=prot_E_fasciculatus_S2_contig668.14785.1|Name=mRNA_E_fasciculatus_S2_contig668.14785.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=105bp
MKGVTHVIAENLSAVKTDKAMKSLKMKVVHPDWLNRCIAAGKLLPDAPFR
VVRSQKLGMDNYFGSSSSTPVSSPSSGCNDEEGRRNSSAQKENGKEGKSR
QHRSV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001357BRCT_dom
IPR036420BRCT_dom_sf