prot_E_fasciculatus_S2_contig6679.14780.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig6679.14780.1
Unique Nameprot_E_fasciculatus_S2_contig6679.14780.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length85
Homology
BLAST of mRNA_E_fasciculatus_S2_contig6679.14780.1 vs. uniprot
Match: A0A6H5JEA6_9PHAE (ERCC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEA6_9PHAE)

HSP 1 Score: 148 bits (373), Expect = 1.450e-39
Identity = 72/80 (90.00%), Postives = 77/80 (96.25%), Query Frame = 0
Query:    6 QQGFELVPLVIAVGDYVLTPKTCIKRKSLSDLFKSMPSERLYNQVKAMLKHYKVPVLLIEFNPDKAFCLLGSGDLTSEIK 85
            QQGFELVPLVIAVGDYVLTP+ C++RKSLSDLF+SM S RLYNQV+AMLKHYKVPVLLIEFNPDKAFCLLGSGDLTSEIK
Sbjct: 1016 QQGFELVPLVIAVGDYVLTPQICVERKSLSDLFQSMSSGRLYNQVEAMLKHYKVPVLLIEFNPDKAFCLLGSGDLTSEIK 1095          
BLAST of mRNA_E_fasciculatus_S2_contig6679.14780.1 vs. uniprot
Match: D7FH45_ECTSI (ERCC4 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH45_ECTSI)

HSP 1 Score: 118 bits (295), Expect = 4.860e-29
Identity = 57/65 (87.69%), Postives = 62/65 (95.38%), Query Frame = 0
Query:    6 QQGFELVPLVIAVGDYVLTPKTCIKRKSLSDLFKSMPSERLYNQVKAMLKHYKVPVLLIEFNPDK 70
            QQGFELVPLVIAVGDYVLTP+ C++RKSLSDLF+SM S RLYNQV+AMLKHYKVPVLLIEFNPDK
Sbjct:  925 QQGFELVPLVIAVGDYVLTPQICVERKSLSDLFQSMSSGRLYNQVEAMLKHYKVPVLLIEFNPDK 989          
BLAST of mRNA_E_fasciculatus_S2_contig6679.14780.1 vs. uniprot
Match: A0A6A0A349_HAELA (DNA repair endonuclease UVH1 (Fragment) n=1 Tax=Haematococcus lacustris TaxID=44745 RepID=A0A6A0A349_HAELA)

HSP 1 Score: 94.4 bits (233), Expect = 2.520e-23
Identity = 45/69 (65.22%), Postives = 53/69 (76.81%), Query Frame = 0
Query:    6 QQGFELVPLVIAVGDYVLTPKTCIKRKSLSDLFKSMPSERLYNQVKAMLKHYKVPVLLIEFNPDKAFCL 74
            QQGFELVPL I VGDYVL+P  C++RK+L DL  S+ S RLY+Q +AM KHYK PVLLIEF  D+ F L
Sbjct:   37 QQGFELVPLTIEVGDYVLSPTMCVERKALPDLVSSLASGRLYSQAEAMCKHYKTPVLLIEFEGDRPFLL 105          
BLAST of mRNA_E_fasciculatus_S2_contig6679.14780.1 vs. uniprot
Match: A0A388LRM5_CHABU (ERCC4 domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LRM5_CHABU)

HSP 1 Score: 101 bits (252), Expect = 2.730e-23
Identity = 42/80 (52.50%), Postives = 65/80 (81.25%), Query Frame = 0
Query:    5 FQQGFELVPLVIAVGDYVLTPKTCIKRKSLSDLFKSMPSERLYNQVKAMLKHYKVPVLLIEFNPDKAFCLLGSGDLTSEI 84
            +QQG +++P+ + VGDY+L+P+ C++RKS+SDLF S  S RLY+Q ++ML++YK+P+LLIEFN D++F L  + DLT +I
Sbjct:  196 YQQGMKVLPVTLEVGDYILSPQMCVERKSISDLFASFASGRLYHQAESMLRYYKIPILLIEFNQDRSFSLSSANDLTDDI 275          
BLAST of mRNA_E_fasciculatus_S2_contig6679.14780.1 vs. uniprot
Match: A0A2P6VME9_9CHLO (DNA repair endonuclease UVH1 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VME9_9CHLO)

HSP 1 Score: 100 bits (248), Expect = 1.080e-22
Identity = 47/80 (58.75%), Postives = 60/80 (75.00%), Query Frame = 0
Query:    6 QQGFELVPLVIAVGDYVLTPKTCIKRKSLSDLFKSMPSERLYNQVKAMLKHYKVPVLLIEFNPDKAFCLLGSGDLTSEIK 85
            QQG E+VPL + VGDYVL+P+ C++RKS+SDL  S+ S RLY+Q  AM KHYK PVLLIEF  D+AF L  S D+  E++
Sbjct:  872 QQGLEVVPLTLEVGDYVLSPELCVERKSISDLKGSLASGRLYHQAAAMSKHYKTPVLLIEFEGDRAFALQASSDIGDEVQ 951          
BLAST of mRNA_E_fasciculatus_S2_contig6679.14780.1 vs. uniprot
Match: A0A2P6TJX7_CHLSO (DNA repair endonuclease UVH1 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TJX7_CHLSO)

HSP 1 Score: 99.8 bits (247), Expect = 1.480e-22
Identity = 46/80 (57.50%), Postives = 61/80 (76.25%), Query Frame = 0
Query:    6 QQGFELVPLVIAVGDYVLTPKTCIKRKSLSDLFKSMPSERLYNQVKAMLKHYKVPVLLIEFNPDKAFCLLGSGDLTSEIK 85
            QQG E+VPL + VGDYVL+P+ C++RKS+SDL  S+ S RLY+Q +AM KHYK PVLLIEF  DKAF L  S ++  +++
Sbjct:  932 QQGLEVVPLTLEVGDYVLSPEICVERKSISDLKGSLASGRLYHQAEAMTKHYKTPVLLIEFEGDKAFALQASSEIGDDVQ 1011          
BLAST of mRNA_E_fasciculatus_S2_contig6679.14780.1 vs. uniprot
Match: A0A6A7FZW5_9CRUS (DNA repair endonuclease XPF-like (Fragment) n=2 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7FZW5_9CRUS)

HSP 1 Score: 97.1 bits (240), Expect = 6.270e-22
Identity = 42/79 (53.16%), Postives = 62/79 (78.48%), Query Frame = 0
Query:    6 QQGFELVPLVIAVGDYVLTPKTCIKRKSLSDLFKSMPSERLYNQVKAMLKHYKVPVLLIEFNPDKAFCLLGSGDLTSEI 84
            + G E++P+ + VGDYVL+PK CI+RKSL DLF S  S RL+NQ+++M +HY+ P+LLIEF+P K+F L+ + D+ S+I
Sbjct:  204 ENGMEVLPVTLEVGDYVLSPKLCIERKSLPDLFGSFGSGRLFNQLQSMSRHYQTPILLIEFDPKKSFSLIANADIPSDI 282          
BLAST of mRNA_E_fasciculatus_S2_contig6679.14780.1 vs. uniprot
Match: A0A024TG96_9STRA (ERCC4 domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TG96_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 3.300e-21
Identity = 43/80 (53.75%), Postives = 61/80 (76.25%), Query Frame = 0
Query:    6 QQGFELVPLVIAVGDYVLTPKTCIKRKSLSDLFKSMPSERLYNQVKAMLKHYKVPVLLIEFNPDKAFCLLGSGDLTSEIK 85
            ++G  L P+ I VGDY+L+P+ C++RKS+SDLF S+ + RL+NQ   ML+ Y+VPVLLIEF+P+K F L    D+TS+IK
Sbjct:  657 KEGLVLYPVTIEVGDYILSPRICVERKSISDLFGSLANGRLFNQADMMLRFYQVPVLLIEFSPEKPFALQQPSDITSDIK 736          
BLAST of mRNA_E_fasciculatus_S2_contig6679.14780.1 vs. uniprot
Match: A0A7S0GHP4_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GHP4_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 4.230e-21
Identity = 43/80 (53.75%), Postives = 57/80 (71.25%), Query Frame = 0
Query:    6 QQGFELVPLVIAVGDYVLTPKTCIKRKSLSDLFKSMPSERLYNQVKAMLKHYKVPVLLIEFNPDKAFCLLGSGDLTSEIK 85
            Q G  L P+ + VGD+VL+P  C++RKS+SDLF S  S RLY Q +AM K+YK P LLI+F+P K+FCL  S +L  EI+
Sbjct:   76 QGGMRLAPVTLIVGDFVLSPVHCVERKSISDLFGSFASGRLYTQAEAMTKYYKCPCLLIDFDPSKSFCLQNSNELGGEIR 155          
BLAST of mRNA_E_fasciculatus_S2_contig6679.14780.1 vs. uniprot
Match: A0A2I0ATN2_9ASPA (DNA repair endonuclease UVH1 n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2I0ATN2_9ASPA)

HSP 1 Score: 95.1 bits (235), Expect = 6.150e-21
Identity = 42/79 (53.16%), Postives = 62/79 (78.48%), Query Frame = 0
Query:    6 QQGFELVPLVIAVGDYVLTPKTCIKRKSLSDLFKSMPSERLYNQVKAMLKHYKVPVLLIEFNPDKAFCLLGSGDLTSEI 84
            Q+G ++VP+V+ VGDYVL+P  C++RKS+ DLF+S  S RLY+QV+ M+++Y++PVLLIEF+ DK+F    S DL  +I
Sbjct:  665 QKGMKIVPVVLEVGDYVLSPFICVERKSIVDLFQSFASGRLYHQVETMIRYYRIPVLLIEFSQDKSFSFQSSSDLGDDI 743          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig6679.14780.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JEA6_9PHAE1.450e-3990.00ERCC4 domain-containing protein n=1 Tax=Ectocarpus... [more]
D7FH45_ECTSI4.860e-2987.69ERCC4 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6A0A349_HAELA2.520e-2365.22DNA repair endonuclease UVH1 (Fragment) n=1 Tax=Ha... [more]
A0A388LRM5_CHABU2.730e-2352.50ERCC4 domain-containing protein n=1 Tax=Chara brau... [more]
A0A2P6VME9_9CHLO1.080e-2258.75DNA repair endonuclease UVH1 n=1 Tax=Micractinium ... [more]
A0A2P6TJX7_CHLSO1.480e-2257.50DNA repair endonuclease UVH1 n=1 Tax=Chlorella sor... [more]
A0A6A7FZW5_9CRUS6.270e-2253.16DNA repair endonuclease XPF-like (Fragment) n=2 Ta... [more]
A0A024TG96_9STRA3.300e-2153.75ERCC4 domain-containing protein n=2 Tax=Aphanomyce... [more]
A0A7S0GHP4_9STRA4.230e-2153.75Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A2I0ATN2_9ASPA6.150e-2153.16DNA repair endonuclease UVH1 n=1 Tax=Apostasia she... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.10130coord: 2..84
e-value: 9.5E-24
score: 85.6
NoneNo IPR availablePANTHERPTHR10150DNA REPAIR ENDONUCLEASE XPFcoord: 4..84
IPR006166ERCC4 domainPFAMPF02732ERCC4coord: 6..67
e-value: 2.7E-8
score: 34.2
IPR011335Restriction endonuclease type II-likeSUPERFAMILY52980Restriction endonuclease-likecoord: 5..75

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig6679contigE_fasciculatus_S2_contig6679:191..1452 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig6679.14780.1mRNA_E_fasciculatus_S2_contig6679.14780.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig6679 191..1454 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig6679.14780.1 ID=prot_E_fasciculatus_S2_contig6679.14780.1|Name=mRNA_E_fasciculatus_S2_contig6679.14780.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=85bp
PPPVFQQGFELVPLVIAVGDYVLTPKTCIKRKSLSDLFKSMPSERLYNQV
KAMLKHYKVPVLLIEFNPDKAFCLLGSGDLTSEIK
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011335Restrct_endonuc-II-like
IPR006166ERCC4_domain