prot_E_fasciculatus_S2_contig6670.14771.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E_fasciculatus_S2_contig6670.14771.1
Unique Name	prot_E_fasciculatus_S2_contig6670.14771.1
Type	polypeptide
Organism	Ectocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length	545

Homology

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BLAST of mRNA_E_fasciculatus_S2_contig6670.14771.1 vs. uniprot
Match: D7G8V5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8V5_ECTSI)

HSP 1 Score: 195 bits (496), Expect = 1.160e-52
Identity = 109/117 (93.16%), Postives = 110/117 (94.02%), Query Frame = 0

Query:  429 GGMGAFFSGIMSTVQDAVKKGEGAASSATTQAEGALAATQSGVTAAEGKIDEVMAKLPSGGGEAGGAG-AGEDGTRALPGSDATAAAAADPYAQDPEDKKMFGTCKVPKAPDSCAIC 544
            GGMG F SGIMSTVQDAVKKGE AASSATTQAEGALAATQSGVTAAEGKIDEVMAK+PSGGGEAGGAG AGEDGTRALPG DATA AAADPYAQDPEDKKMFGTCKVPK PDSCAIC
Sbjct:  352 GGMGGFLSGIMSTVQDAVKKGESAASSATTQAEGALAATQSGVTAAEGKIDEVMAKIPSGGGEAGGAGGAGEDGTRALPGGDATATAAADPYAQDPEDKKMFGTCKVPKVPDSCAIC 468

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BLAST of mRNA_E_fasciculatus_S2_contig6670.14771.1 vs. uniprot
Match: A0A6H5KKJ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKJ4_9PHAE)

HSP 1 Score: 184 bits (467), Expect = 4.620e-48
Identity = 104/117 (88.89%), Postives = 105/117 (89.74%), Query Frame = 0

Query:  429 GGMGAFFSGIMSTVQDAVKKGEGAASSATTQAEGALAATQSGVTAAEGKIDEVMAKLPSGGGEAGGAG-AGEDGTRALPGSDATAAAAADPYAQDPEDKKMFGTCKVPKAPDSCAIC 544
            GGMG F SGIMSTVQDAV KGE AASSATTQAEGALAATQSGVTAAEG+IDEVMAKLPSGG EAGGAG AGEDGTRALPG DAT  AAADPYAQDPEDKKM GTCKVPK PDSC IC
Sbjct:  405 GGMGGFLSGIMSTVQDAVSKGESAASSATTQAEGALAATQSGVTAAEGEIDEVMAKLPSGGREAGGAGGAGEDGTRALPGGDATTTAAADPYAQDPEDKKMLGTCKVPKVPDSCVIC 521

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig6670.14771.1 vs. uniprot

BLAST of mRNA_E_fasciculatus_S2_contig6670.14771.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7G8V5_ECTSI	1.160e-52	93.16	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KKJ4_9PHAE	4.620e-48	88.89	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00833	POAALLERGEN	coord: 146..165 score: 26.67 coord: 293..307 score: 53.33 coord: 202..219 score: 43.21 coord: 263..281 score: 34.5
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 42..59
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..59
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 60..544
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..27
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 28..41

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E_fasciculatus_S2_contig6670	contig	E_fasciculatus_S2_contig6670:270..3045 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-07-07

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E_fasciculatus_S2_contig6670.14771.1	mRNA_E_fasciculatus_S2_contig6670.14771.1	Ectocarpus fasciculatus EfasUO2	mRNA	E_fasciculatus_S2_contig6670 270..3045 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E_fasciculatus_S2_contig6670.14771.1 ID=prot_E_fasciculatus_S2_contig6670.14771.1|Name=mRNA_E_fasciculatus_S2_contig6670.14771.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=545bp
MGRNSKGSKKNKSRKKSVDGNAAASKPAAAAAASALPVIPAEAPAAAPAP
APAATPVAAAAPEAADGTPPVPSSPPQNPTAAAAAATATATPPPATSAPP
PPAVEEQTDEMMDMSKLTEGVAAAASSVNKAVTEAAETATTSATGAASSA
SATAESTVASAAEAATAAADTAKSEATAAVETAKSEATAAADVATSEATA
AADTAASGATAAVETTKSEVTAAADAATSEAKAAADTAASEATAAVETTK
SEVTAAADAATSEATAAADAATSEATAAASTAESDVAAATTEATAAASTA
AADATAAATDATAAVSTAAADAAAKLQAVAAPATEDADPAAATEPAAAAA
GGGANPLAGIVSQAQGLVDVTEATLGSGMATAEGALGNIKTSLGAVTSQV
DTALSSASSKLAAPAAGDASETAAPAAGGGMGAFFSGIMSTVQDAVKKGE
GAASSATTQAEGALAATQSGVTAAEGKIDEVMAKLPSGGGEAGGAGAGED
GTRALPGSDATAAAAADPYAQDPEDKKMFGTCKVPKAPDSCAIC*