prot_E_fasciculatus_S2_contig6669.14767.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E_fasciculatus_S2_contig6669.14767.1
Unique Name	prot_E_fasciculatus_S2_contig6669.14767.1
Type	polypeptide
Organism	Ectocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length	222

Homology

[Close]

BLAST of mRNA_E_fasciculatus_S2_contig6669.14767.1 vs. uniprot
Match: A0A6H5JPS9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPS9_9PHAE)

HSP 1 Score: 240 bits (613), Expect = 1.350e-77
Identity = 146/194 (75.26%), Postives = 156/194 (80.41%), Query Frame = 0

Query:    1 MVFSLSAKGGRGSPHRRQQNGNGGGVIPREKVSRFVFLSALLVLYSAFTLGLILWNSKSSSSS-SEPSPID-SGGGGSIHLGSEALGGGEKVASSSPIGEGRIGAGAGXXXXXXXDEGGSTGRHSP-GSAGSNKLIGAKGGAEGTMDDQKHGGGXXXFGATGATAPRSGEARPAGAHKVRKEDGPSFLRQGGQG 191
            MV+ LSAKG RGSPHR QQNGNGGGVIPREKVSRFVFLS LLV+YSAFTLGLI WNSKSS  + SEPSPID SGGGGS HLGSEA  GG+KVASS  I EGR GAGAG       +EG ST RHSP GSAGSNKL+GA GG EG M D++HGGG   FGA+G  APR GEARPAGAHKVR ED PSF+RQGGQG
Sbjct:    1 MVYPLSAKG-RGSPHRGQQNGNGGGVIPREKVSRFVFLSTLLVVYSAFTLGLIFWNSKSSGRNPSEPSPIDQSGGGGSFHLGSEASAGGDKVASSLLIREGRRGAGAGETQAGFGNEGKSTRRHSPAGSAGSNKLVGASGG-EGMMHDERHGGGG--FGASGVMAPRPGEARPAGAHKVRVEDAPSFVRQGGQG 190

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig6669.14767.1 vs. uniprot

BLAST of mRNA_E_fasciculatus_S2_contig6669.14767.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5JPS9_9PHAE	1.350e-77	75.26	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 56..221
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..34
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 35..55
None	No IPR available	TMHMM	TMhelix		coord: 35..57

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E_fasciculatus_S2_contig6669	contig	E_fasciculatus_S2_contig6669:1562..6605 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-07-07

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E_fasciculatus_S2_contig6669.14767.1	mRNA_E_fasciculatus_S2_contig6669.14767.1	Ectocarpus fasciculatus EfasUO2	mRNA	E_fasciculatus_S2_contig6669 139..6605 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E_fasciculatus_S2_contig6669.14767.1 ID=prot_E_fasciculatus_S2_contig6669.14767.1|Name=mRNA_E_fasciculatus_S2_contig6669.14767.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=222bp
MVFSLSAKGGRGSPHRRQQNGNGGGVIPREKVSRFVFLSALLVLYSAFTL
GLILWNSKSSSSSSEPSPIDSGGGGSIHLGSEALGGGEKVASSSPIGEGR
IGAGAGEGEAGHGDEGGSTGRHSPGSAGSNKLIGAKGGAEGTMDDQKHGG
GGGGFGATGATAPRSGEARPAGAHKVRKEDGPSFLRQGGQGAVEDTGAIS
GAVQRAVGATPATSPPLGGRF*