prot_E_fasciculatus_S2_contig6668.14766.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig6668.14766.1
Unique Nameprot_E_fasciculatus_S2_contig6668.14766.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length549
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig6668.14766.1 vs. uniprot
Match: A0A6H5L395_9PHAE (Ubiquitin-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L395_9PHAE)

HSP 1 Score: 465 bits (1197), Expect = 6.790e-159
Identity = 288/351 (82.05%), Postives = 295/351 (84.05%), Query Frame = 0 
Query:  220 VSDEDGVQEAEVITEAEWLDLHRVGYVTGVDGDGDGXXXXXXXXXXXXXXXSTK------------------SVLERTFGVRYSPGGEGEEEGGGWCPRVCEECTKAAAERAELAKIVFEGKQVKVIRLKDGEEAPMGDGAAAQFSSTGRLKRNTRGRGAAPFEITCGSDDTVSHFKLQVFASIEVAPARQVLYLRGTELMGGGTLQAANVKAGDTLHLKVTEPSGDVDEDDGQIFLDGLTKPPSGPETGFQGTALMGXXXXXXXXXXTRRPSPP--AFLSGIGAGG--VTVDVEAEIAAAEAASLAVDVWEENGDLDGAASEGFMACSKCTLRNKLTAERCIACNEPLLT 548
            +SDEDGV EAEVITEAEWLDLHRV      DG GDGXXXXXXXXXXXXXXX                     SVLERTFGVRYSPG E EEEGGGW PRVCEECTKAAAERAEL+K+VFEGKQVKVIRLKDGE+AP GDGAAAQFSSTGRLKRNTRGRGAAPFEITC SDDTVSHFKLQVFASIEVAPARQVLYLRGTEL GG TLQAANVKAGDTLHLKVTEPSGDVDEDDGQIFLDGLTKPPSGPETGFQGTALMGXXXXXXXXXX         AFLS +G     VTVDVEAEIAAAEAASLAVD W+ENGD DGA SEGFMACSKCTLRNKLTAERC+ CNEPL T
Sbjct:    1 MSDEDGVPEAEVITEAEWLDLHRV------DG-GDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVLERTFGVRYSPGEE-EEEGGGWFPRVCEECTKAAAERAELSKVVFEGKQVKVIRLKDGEQAPTGDGAAAQFSSTGRLKRNTRGRGAAPFEITCSSDDTVSHFKLQVFASIEVAPARQVLYLRGTELTGGSTLQAANVKAGDTLHLKVTEPSGDVDEDDGQIFLDGLTKPPSGPETGFQGTALMGXXXXXXXXXXXXXXXXXXXAFLSAVGGXXATVTVDVEAEIAAAEAASLAVDDWKENGDNDGA-SEGFMACSKCTLRNKLTAERCLTCNEPLFT 342
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BLAST of mRNA_E_fasciculatus_S2_contig6668.14766.1 vs. uniprot
Match: D8LKX6_ECTSI (Similar to ubiquitin specific protease 48 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKX6_ECTSI)

HSP 1 Score: 227 bits (578), Expect = 1.990e-60
Identity = 114/134 (85.07%), Postives = 120/134 (89.55%), Query Frame = 0 
Query:    1 MRLPDGRVNQSITCEHGNLVGGKSGRRKYRWISPRGWDMVKKLFPLAEELEYPAGTQPCSQCEEQGKDEMKLKLDLRQAKSAELVSGPSLRGLWKRSDGLPPRLLAQSRGGSSSXXXXXXXXRQATRKARGRQG 134
            MRLPDGRVNQ+ITCEHGNLVGGKSGRRKYRWISPRGW+MVK LFPLAEE+EYPAGTQPCSQCEEQ KDEMKLKLDLRQAKSAELV+GPSL+GLWKRSD LPPRLLA SRGGSSS        RQA+ KARGR G
Sbjct: 1536 MRLPDGRVNQNITCEHGNLVGGKSGRRKYRWISPRGWEMVKNLFPLAEEVEYPAGTQPCSQCEEQDKDEMKLKLDLRQAKSAELVTGPSLKGLWKRSDALPPRLLAHSRGGSSSSSNS----RQASLKARGRPG 1665
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BLAST of mRNA_E_fasciculatus_S2_contig6668.14766.1 vs. uniprot
Match: A0A6H5L6A7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6A7_9PHAE)

HSP 1 Score: 146 bits (368), Expect = 2.810e-33
Identity = 74/96 (77.08%), Postives = 79/96 (82.29%), Query Frame = 0 
Query:    1 MRLPDGRVNQSITCEHGNLVGGKSGRRKYRWISPRGWDMVKKLFPLAEELEYPAGTQPCSQCEEQ---------GKDEMKLKLDLRQAKSAELVSG 87
            MRLPDGRVNQ+ITCEHGNLVGG    RKYRWISPRGW+MVK LFPLA+E+EYPAGTQPCSQCEEQ          KDEMKLK  LRQAKSAELV+G
Sbjct: 1047 MRLPDGRVNQNITCEHGNLVGG----RKYRWISPRGWEMVKSLFPLAQEVEYPAGTQPCSQCEEQVVGATTKEQDKDEMKLKRGLRQAKSAELVTG 1138
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig6668.14766.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L395_9PHAE6.790e-15982.05Ubiquitin-like domain-containing protein n=2 Tax=E... [more]
D8LKX6_ECTSI1.990e-6085.07Similar to ubiquitin specific protease 48 n=1 Tax=... [more]
A0A6H5L6A7_9PHAE2.810e-3377.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000626Ubiquitin domainSMARTSM00213ubq_7coord: 352..423
e-value: 2.1E-4
score: 30.6
IPR000626Ubiquitin domainPFAMPF00240ubiquitincoord: 364..422
e-value: 7.3E-8
score: 32.1
IPR000626Ubiquitin domainPROSITEPS50053UBIQUITIN_2coord: 354..427
score: 11.246
IPR001876Zinc finger, RanBP2-typeSMARTSM00547zf_4coord: 521..545
e-value: 0.0087
score: 25.3
NoneNo IPR availableGENE3D3.10.20.90coord: 352..429
e-value: 7.1E-9
score: 37.5
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 364..433

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig6668contigE_fasciculatus_S2_contig6668:991..6665 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig6668.14766.1mRNA_E_fasciculatus_S2_contig6668.14766.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig6668 23..6674 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig6668.14766.1 ID=prot_E_fasciculatus_S2_contig6668.14766.1|Name=mRNA_E_fasciculatus_S2_contig6668.14766.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=549bp
MRLPDGRVNQSITCEHGNLVGGKSGRRKYRWISPRGWDMVKKLFPLAEEL
EYPAGTQPCSQCEEQGKDEMKLKLDLRQAKSAELVSGPSLRGLWKRSDGL
PPRLLAQSRGGSSSSSGSSSNSRQATRKARGRQGRRNYNFYWRSSSHERY
FVVEAWWMSTWRAFHDNSSIHSDTPGCLLNQAFRCDHGLVVVGERLRQLV
ERGQLPPAAGAAGASVQAVVSDEDGVQEAEVITEAEWLDLHRVGYVTGVD
GDGDGGGGSSSAGGAASSTSSTKSVLERTFGVRYSPGGEGEEEGGGWCPR
VCEECTKAAAERAELAKIVFEGKQVKVIRLKDGEEAPMGDGAAAQFSSTG
RLKRNTRGRGAAPFEITCGSDDTVSHFKLQVFASIEVAPARQVLYLRGTE
LMGGGTLQAANVKAGDTLHLKVTEPSGDVDEDDGQIFLDGLTKPPSGPET
GFQGTALMGGGGGGGSSSGTRRPSPPAFLSGIGAGGVTVDVEAEIAAAEA
ASLAVDVWEENGDLDGAASEGFMACSKCTLRNKLTAERCIACNEPLLT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029071Ubiquitin-like_domsf
IPR001876Znf_RanBP2
IPR000626Ubiquitin_dom